RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 MPNDQ8N594 471 aa14.1□□□□□ -0.15
SNX21-211ENST00000486336 RBM46Q8TBY0 533 aaKnown RBP14.1□□□□□ -0.15
SNX21-211ENST00000486336 CCDC85AQ96PX6 553 aaPredicted RBP14.1□□□□□ -0.15
SNX21-211ENST00000486336 PPIP5K2O43314 1243 aa14.09□□□□□ -0.15
SNX21-211ENST00000486336 IGKV5-2P06315 115 aa14.09□□□□□ -0.15
SNX21-211ENST00000486336 DIEXFQ68CQ4 756 aaKnown RBP14.09□□□□□ -0.15
SNX21-211ENST00000486336 CELF1Q92879 486 aaKnown RBP14.09□□□□□ -0.15
SNX21-211ENST00000486336 LAMB2P55268 1798 aa14.09□□□□□ -0.15
SNX21-211ENST00000486336 NEURL1BA8MQ27 555 aa14.08□□□□□ -0.16
SNX21-211ENST00000486336 PDE8AO60658 829 aa14.08□□□□□ -0.16
SNX21-211ENST00000486336 HSPA6P17066 643 aa14.08□□□□□ -0.16
SNX21-211ENST00000486336 EIF6P56537 245 aaKnown RBP14.08□□□□□ -0.16
SNX21-211ENST00000486336 AOC3Q16853 763 aa14.08□□□□□ -0.16
SNX21-211ENST00000486336 SUPT20HQ8NEM7 779 aa14.08□□□□□ -0.16
SNX21-211ENST00000486336 DNAAF4Q8WXU2 420 aa14.08□□□□□ -0.16
SNX21-211ENST00000486336 GJA3Q9Y6H8 435 aa14.08□□□□□ -0.16
SNX21-211ENST00000486336 ZNF521Q96K83 1311 aa14.08□□□□□ -0.16
SNX21-211ENST00000486336 ZNF541Q9H0D2 1346 aa14.08□□□□□ -0.16
SNX21-211ENST00000486336 POTECB2RU33 542 aa14.07□□□□□ -0.16
SNX21-211ENST00000486336 E9PSI1 815 aa14.07□□□□□ -0.16
SNX21-211ENST00000486336 F6X3S4 739 aa14.07□□□□□ -0.16
SNX21-211ENST00000486336 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
SNX21-211ENST00000486336 CCDC152Q4G0S7 254 aa14.07□□□□□ -0.16
SNX21-211ENST00000486336 TMC4Q7Z404 712 aa14.07□□□□□ -0.16
SNX21-211ENST00000486336 NIM1KQ8IY84 436 aa14.07□□□□□ -0.16
SNX21-211ENST00000486336 SEC31BQ9NQW1 1179 aa14.07□□□□□ -0.16
SNX21-211ENST00000486336 TAF1P21675 1872 aa14.07□□□□□ -0.16
SNX21-211ENST00000486336 DDX60Q8IY21 1712 aaKnown RBP14.07□□□□□ -0.16
SNX21-211ENST00000486336 FZD9O00144 591 aa14.06□□□□□ -0.16
SNX21-211ENST00000486336 UBE3BQ7Z3V4 1068 aa14.06□□□□□ -0.16
SNX21-211ENST00000486336 SMC1BQ8NDV3 1235 aa14.06□□□□□ -0.16
SNX21-211ENST00000486336 NSFL1CQ9UNZ2 370 aaKnown RBP14.06□□□□□ -0.16
SNX21-211ENST00000486336 C6orf229H3BNL8 230 aa14.05□□□□□ -0.16
SNX21-211ENST00000486336 SLFN5Q08AF3 891 aa14.05□□□□□ -0.16
SNX21-211ENST00000486336 FSTL1Q12841 308 aa14.05□□□□□ -0.16
SNX21-211ENST00000486336 GCKRQ14397 625 aa14.05□□□□□ -0.16
SNX21-211ENST00000486336 MIER1Q8N108 512 aa14.05□□□□□ -0.16
SNX21-211ENST00000486336 CDCA7LQ96GN5 454 aa14.05□□□□□ -0.16
SNX21-211ENST00000486336 CDHR2Q9BYE9 1310 aa14.05□□□□□ -0.16
SNX21-211ENST00000486336 SNED1Q8TER0 1413 aa14.05□□□□□ -0.16
SNX21-211ENST00000486336 IQCA1LA6NCM1 817 aa14.04□□□□□ -0.16
SNX21-211ENST00000486336 H7C1W4 665 aa14.04□□□□□ -0.16
SNX21-211ENST00000486336 RIMBP2O15034 1052 aa14.04□□□□□ -0.16
SNX21-211ENST00000486336 CTSWP56202 376 aa14.04□□□□□ -0.16
SNX21-211ENST00000486336 GPSM2P81274 684 aa14.04□□□□□ -0.16
SNX21-211ENST00000486336 SLC4A10Q6U841 1118 aa14.04□□□□□ -0.16
SNX21-211ENST00000486336 LINS1Q8NG48 757 aa14.04□□□□□ -0.16
SNX21-211ENST00000486336 RTFDC1Q9BY42 306 aaPredicted RBP14.04□□□□□ -0.16
SNX21-211ENST00000486336 VPS33BQ9H267 617 aa14.04□□□□□ -0.16
SNX21-211ENST00000486336 EAPPQ56P03 285 aaPredicted RBP14.03□□□□□ -0.16
SNX21-211ENST00000486336 ANKRD18AQ8IVF6 992 aa14.03□□□□□ -0.16
SNX21-211ENST00000486336 GPC2Q8N158 579 aa14.03□□□□□ -0.16
SNX21-211ENST00000486336 ANKIB1Q9P2G1 1089 aa14.03□□□□□ -0.16
SNX21-211ENST00000486336 HACL1Q9UJ83 578 aa14.03□□□□□ -0.16
SNX21-211ENST00000486336 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
SNX21-211ENST00000486336 WDR90Q96KV7 1748 aa14.03□□□□□ -0.16
SNX21-211ENST00000486336 CACNA1FO60840 1977 aa14.03□□□□□ -0.16
SNX21-211ENST00000486336 LMOD1P29536 600 aaPredicted RBP14.02□□□□□ -0.17
SNX21-211ENST00000486336 APLP1P51693 650 aa14.02□□□□□ -0.17
SNX21-211ENST00000486336 WASHC4Q2M389 1173 aa14.02□□□□□ -0.17
SNX21-211ENST00000486336 TTLL11Q8NHH1 800 aa14.02□□□□□ -0.17
SNX21-211ENST00000486336 L3MBTL3Q96JM7 780 aaPredicted RBP14.02□□□□□ -0.17
SNX21-211ENST00000486336 CDC5LQ99459 802 aaKnown RBP14.02□□□□□ -0.17
SNX21-211ENST00000486336 TAF1DQ9H5J8 278 aaPredicted RBP14.02□□□□□ -0.17
SNX21-211ENST00000486336 GREM2Q9H772 168 aa14.02□□□□□ -0.17
SNX21-211ENST00000486336 ZNRF3Q9ULT6 936 aa14.02□□□□□ -0.17
SNX21-211ENST00000486336 G3V3G9 751 aa14.01□□□□□ -0.17
SNX21-211ENST00000486336 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
SNX21-211ENST00000486336 POTEJP0CG39 1038 aa14.01□□□□□ -0.17
SNX21-211ENST00000486336 KIAA2012Q0VF49 1180 aa14.01□□□□□ -0.17
SNX21-211ENST00000486336 BEND3Q5T5X7 828 aa14.01□□□□□ -0.17
SNX21-211ENST00000486336 DCAF8Q5TAQ9 597 aa14.01□□□□□ -0.17
SNX21-211ENST00000486336 MRPL50Q8N5N7 158 aaKnown RBP14.01□□□□□ -0.17
SNX21-211ENST00000486336 GPR101Q96P66 508 aaPredicted RBP14.01□□□□□ -0.17
SNX21-211ENST00000486336 POLLQ9UGP5 575 aa14.01□□□□□ -0.17
SNX21-211ENST00000486336 COL4A5P29400 1685 aa14.01□□□□□ -0.17
SNX21-211ENST00000486336 RAD17O75943 681 aa14□□□□□ -0.17
SNX21-211ENST00000486336 EPHX2P34913 555 aa14□□□□□ -0.17
SNX21-211ENST00000486336 CXCL9Q07325 125 aa14□□□□□ -0.17
SNX21-211ENST00000486336 DOK7Q18PE1 504 aa14□□□□□ -0.17
SNX21-211ENST00000486336 CHADLQ6NUI6 762 aa14□□□□□ -0.17
SNX21-211ENST00000486336 EYA3Q99504 573 aa14□□□□□ -0.17
SNX21-211ENST00000486336 BCL2L13Q9BXK5 485 aa14□□□□□ -0.17
SNX21-211ENST00000486336 C9orf78Q9NZ63 289 aaPredicted RBP14□□□□□ -0.17
SNX21-211ENST00000486336 GGA1Q9UJY5 639 aa14□□□□□ -0.17
SNX21-211ENST00000486336 CHMP3Q9Y3E7 222 aa14□□□□□ -0.17
SNX21-211ENST00000486336 COL4A1P02462 1669 aa13.99□□□□□ -0.17
SNX21-211ENST00000486336 UFL1O94874 794 aa13.99□□□□□ -0.17
SNX21-211ENST00000486336 IGHMBP2P38935 993 aaKnown RBP13.99□□□□□ -0.17
SNX21-211ENST00000486336 CASP7P55210 303 aa13.99□□□□□ -0.17
SNX21-211ENST00000486336 HTRA3P83110 453 aa13.99□□□□□ -0.17
SNX21-211ENST00000486336 CIAPIN1Q6FI81 312 aa13.99□□□□□ -0.17
SNX21-211ENST00000486336 TBC1D16Q8TBP0 767 aa13.99□□□□□ -0.17
SNX21-211ENST00000486336 SSH1Q8WYL5 1049 aa13.99□□□□□ -0.17
SNX21-211ENST00000486336 ZC3H12CQ9C0D7 883 aaKnown RBP13.99□□□□□ -0.17
SNX21-211ENST00000486336 SRCIN1Q9C0H9 1055 aa13.99□□□□□ -0.17
SNX21-211ENST00000486336 DBNDD1Q9H9R9 158 aa13.99□□□□□ -0.17
SNX21-211ENST00000486336 ITGA6P23229 1130 aa13.98□□□□□ -0.17
SNX21-211ENST00000486336 EPS15P42566 896 aa13.98□□□□□ -0.17
SNX21-211ENST00000486336 TNIP1Q15025 636 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms