RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
VTI1BP1-201ENST00000486325 PTPN12Q05209 780 aaKnown RBP16.39■□□□□ 0.21
VTI1BP1-201ENST00000486325 ERFEQ4G0M1 354 aa16.39■□□□□ 0.21
VTI1BP1-201ENST00000486325 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
VTI1BP1-201ENST00000486325 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
VTI1BP1-201ENST00000486325 C4AP0C0L4 1744 aa16.39■□□□□ 0.21
VTI1BP1-201ENST00000486325 SF3B3Q15393 1217 aaKnown RBP16.38■□□□□ 0.21
VTI1BP1-201ENST00000486325 TAF7LQ5H9L4 462 aa16.38■□□□□ 0.21
VTI1BP1-201ENST00000486325 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
VTI1BP1-201ENST00000486325 RHPN1Q8TCX5 695 aa16.38■□□□□ 0.21
VTI1BP1-201ENST00000486325 SLC16A10Q8TF71 515 aa16.38■□□□□ 0.21
VTI1BP1-201ENST00000486325 LNPKQ9C0E8 428 aa16.38■□□□□ 0.21
VTI1BP1-201ENST00000486325 CIAO1O76071 339 aa16.37■□□□□ 0.21
VTI1BP1-201ENST00000486325 ST5P78524 1137 aa16.37■□□□□ 0.21
VTI1BP1-201ENST00000486325 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
VTI1BP1-201ENST00000486325 EYA2O00167 538 aa16.36■□□□□ 0.21
VTI1BP1-201ENST00000486325 APBB1O00213 710 aa16.36■□□□□ 0.21
VTI1BP1-201ENST00000486325 ITGA6P23229 1130 aa16.36■□□□□ 0.21
VTI1BP1-201ENST00000486325 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
VTI1BP1-201ENST00000486325 GREM2Q9H772 168 aa16.36■□□□□ 0.21
VTI1BP1-201ENST00000486325 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
VTI1BP1-201ENST00000486325 RTL9Q8NET4 1388 aa16.36■□□□□ 0.21
VTI1BP1-201ENST00000486325 POLRMTO00411 1230 aaKnown RBP16.35■□□□□ 0.21
VTI1BP1-201ENST00000486325 RGS3P49796 1198 aa16.35■□□□□ 0.21
VTI1BP1-201ENST00000486325 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
VTI1BP1-201ENST00000486325 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
VTI1BP1-201ENST00000486325 CDC5LQ99459 802 aaKnown RBP16.35■□□□□ 0.21
VTI1BP1-201ENST00000486325 PRR5LQ6MZQ0 368 aa16.34■□□□□ 0.21
VTI1BP1-201ENST00000486325 SIL1Q9H173 461 aa16.34■□□□□ 0.21
VTI1BP1-201ENST00000486325 SMARCA5O60264 1052 aaPredicted RBP16.33■□□□□ 0.2
VTI1BP1-201ENST00000486325 LDHAL6AQ6ZMR3 332 aa16.33■□□□□ 0.2
VTI1BP1-201ENST00000486325 KLHDC4Q8TBB5 520 aa16.33■□□□□ 0.2
VTI1BP1-201ENST00000486325 CCDC85AQ96PX6 553 aaPredicted RBP16.33■□□□□ 0.2
VTI1BP1-201ENST00000486325 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.2
VTI1BP1-201ENST00000486325 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.2
VTI1BP1-201ENST00000486325 QSER1Q2KHR3 1735 aa16.33■□□□□ 0.2
VTI1BP1-201ENST00000486325 MYH3P11055 1940 aa16.33■□□□□ 0.2
VTI1BP1-201ENST00000486325 SASH1O94885 1247 aa16.32■□□□□ 0.2
VTI1BP1-201ENST00000486325 MMP10P09238 476 aa16.32■□□□□ 0.2
VTI1BP1-201ENST00000486325 PDE4AP27815 886 aa16.32■□□□□ 0.2
VTI1BP1-201ENST00000486325 IGHMBP2P38935 993 aaKnown RBP16.32■□□□□ 0.2
VTI1BP1-201ENST00000486325 DDR1Q08345 913 aa16.32■□□□□ 0.2
VTI1BP1-201ENST00000486325 RIC1Q4ADV7 1423 aa16.32■□□□□ 0.2
VTI1BP1-201ENST00000486325 ZNF594Q96JF6 807 aaPredicted RBP16.32■□□□□ 0.2
VTI1BP1-201ENST00000486325 MPHOSPH8Q99549 860 aa16.32■□□□□ 0.2
VTI1BP1-201ENST00000486325 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
VTI1BP1-201ENST00000486325 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
VTI1BP1-201ENST00000486325 ATG9AQ7Z3C6 839 aa16.31■□□□□ 0.2
VTI1BP1-201ENST00000486325 BRIP1Q9BX63 1249 aa16.31■□□□□ 0.2
VTI1BP1-201ENST00000486325 IL1RAPL2Q9NP60 686 aa16.31■□□□□ 0.2
VTI1BP1-201ENST00000486325 CNNM1Q9NRU3 951 aa16.31■□□□□ 0.2
VTI1BP1-201ENST00000486325 AKAP2Q9Y2D5 859 aa16.31■□□□□ 0.2
VTI1BP1-201ENST00000486325 IFIT2P09913 472 aaKnown RBP16.3■□□□□ 0.2
VTI1BP1-201ENST00000486325 ANKRD18AQ8IVF6 992 aa16.3■□□□□ 0.2
VTI1BP1-201ENST00000486325 PLEKHM2Q8IWE5 1019 aa16.3■□□□□ 0.2
VTI1BP1-201ENST00000486325 C16orf71Q8IYS4 520 aaPredicted RBP16.3■□□□□ 0.2
VTI1BP1-201ENST00000486325 OSBPL3Q9H4L5 887 aa16.3■□□□□ 0.2
VTI1BP1-201ENST00000486325 RIPOR2Q9Y4F9 1068 aa16.3■□□□□ 0.2
VTI1BP1-201ENST00000486325 TUBGCP6Q96RT7 1819 aa16.3■□□□□ 0.2
VTI1BP1-201ENST00000486325 ABCC12Q96J65 1359 aa16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 MROH5Q6ZUA9 1318 aa16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 KLRG2A4D1S0 409 aaPredicted RBP16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 PDE6BP35913 854 aa16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 RPS8P62241 208 aaKnown RBP16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 TFCP2Q12800 502 aa16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 LRRC24Q50LG9 513 aa16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 GPATCH3Q96I76 525 aa16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 SEC31BQ9NQW1 1179 aa16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 STAP2Q9UGK3 403 aa16.29■□□□□ 0.2
VTI1BP1-201ENST00000486325 LAMB2P55268 1798 aa16.28■□□□□ 0.2
VTI1BP1-201ENST00000486325 DDX60Q8IY21 1712 aaKnown RBP16.28■□□□□ 0.2
VTI1BP1-201ENST00000486325 MX1P20591 662 aa16.28■□□□□ 0.2
VTI1BP1-201ENST00000486325 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
VTI1BP1-201ENST00000486325 SKAP1Q86WV1 359 aa16.28■□□□□ 0.2
VTI1BP1-201ENST00000486325 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
VTI1BP1-201ENST00000486325 RPGRQ92834 1020 aaKnown RBP16.28■□□□□ 0.2
VTI1BP1-201ENST00000486325 PUS3Q9BZE2 481 aaKnown RBP16.28■□□□□ 0.2
VTI1BP1-201ENST00000486325 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
VTI1BP1-201ENST00000486325 AOX1Q06278 1338 aa16.27■□□□□ 0.2
VTI1BP1-201ENST00000486325 PDE1AP54750 535 aa16.27■□□□□ 0.2
VTI1BP1-201ENST00000486325 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
VTI1BP1-201ENST00000486325 TNNI3KQ59H18 835 aa16.27■□□□□ 0.2
VTI1BP1-201ENST00000486325 METTL24Q5JXM2 366 aa16.27■□□□□ 0.2
VTI1BP1-201ENST00000486325 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
VTI1BP1-201ENST00000486325 AACSQ86V21 672 aa16.27■□□□□ 0.2
VTI1BP1-201ENST00000486325 FPGT-TNNI3KV9GXZ4 949 aa16.27■□□□□ 0.2
VTI1BP1-201ENST00000486325 TTC41PQ6P2S7 1318 aa16.26■□□□□ 0.19
VTI1BP1-201ENST00000486325 ERC2O15083 957 aa16.26■□□□□ 0.19
VTI1BP1-201ENST00000486325 HOXA10P31260 410 aaPredicted RBP16.26■□□□□ 0.19
VTI1BP1-201ENST00000486325 EAF2Q96CJ1 260 aaPredicted RBP16.26■□□□□ 0.19
VTI1BP1-201ENST00000486325 CRAMP1Q96RY5 1269 aa16.26■□□□□ 0.19
VTI1BP1-201ENST00000486325 BBOX1O75936 387 aa16.25■□□□□ 0.19
VTI1BP1-201ENST00000486325 PDE8BO95263 885 aa16.25■□□□□ 0.19
VTI1BP1-201ENST00000486325 GRAPQ13588 217 aa16.25■□□□□ 0.19
VTI1BP1-201ENST00000486325 BMP2KLQ5H9B9 411 aa16.25■□□□□ 0.19
VTI1BP1-201ENST00000486325 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
VTI1BP1-201ENST00000486325 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
VTI1BP1-201ENST00000486325 SALL3Q9BXA9 1300 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms