RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 IGHDP01880 384 aa20.62■□□□□ 0.89
THBS3-207ENST00000486260 NLRP3Q96P20 1036 aa20.62■□□□□ 0.89
THBS3-207ENST00000486260 POLA2Q14181 598 aa20.6■□□□□ 0.89
THBS3-207ENST00000486260 FAM161AQ3B820 660 aa20.6■□□□□ 0.89
THBS3-207ENST00000486260 SSH3Q8TE77 659 aa20.6■□□□□ 0.89
THBS3-207ENST00000486260 RWDD1Q9H446 243 aaPredicted RBP20.6■□□□□ 0.89
THBS3-207ENST00000486260 GREM2Q9H772 168 aa20.6■□□□□ 0.89
THBS3-207ENST00000486260 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
THBS3-207ENST00000486260 HMMRO75330 724 aa20.59■□□□□ 0.89
THBS3-207ENST00000486260 POLD1P28340 1107 aa20.59■□□□□ 0.89
THBS3-207ENST00000486260 HDAC1Q13547 482 aaPredicted RBP20.59■□□□□ 0.89
THBS3-207ENST00000486260 SF3B3Q15393 1217 aaKnown RBP20.59■□□□□ 0.89
THBS3-207ENST00000486260 CCDC152Q4G0S7 254 aa20.59■□□□□ 0.89
THBS3-207ENST00000486260 BRIP1Q9BX63 1249 aa20.58■□□□□ 0.89
THBS3-207ENST00000486260 RIC1Q4ADV7 1423 aa20.58■□□□□ 0.88
THBS3-207ENST00000486260 RFX5P48382 616 aaPredicted RBP20.57■□□□□ 0.88
THBS3-207ENST00000486260 KLHDC4Q8TBB5 520 aa20.57■□□□□ 0.88
THBS3-207ENST00000486260 ANKRD31Q8N7Z5 1873 aa20.57■□□□□ 0.88
THBS3-207ENST00000486260 ITGA6P23229 1130 aa20.57■□□□□ 0.88
THBS3-207ENST00000486260 IFIT5Q13325 482 aaKnown RBP20.57■□□□□ 0.88
THBS3-207ENST00000486260 CCDC57Q2TAC2 916 aa20.57■□□□□ 0.88
THBS3-207ENST00000486260 SGIP1Q9BQI5 828 aa20.57■□□□□ 0.88
THBS3-207ENST00000486260 PA2G4Q9UQ80 394 aaKnown RBP20.57■□□□□ 0.88
THBS3-207ENST00000486260 PTGER2P43116 358 aa20.56■□□□□ 0.88
THBS3-207ENST00000486260 SEC31BQ9NQW1 1179 aa20.56■□□□□ 0.88
THBS3-207ENST00000486260 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
THBS3-207ENST00000486260 ZNF594Q96JF6 807 aaPredicted RBP20.55■□□□□ 0.88
THBS3-207ENST00000486260 ANKRD18BA2A2Z9 1011 aa20.54■□□□□ 0.88
THBS3-207ENST00000486260 KLRG2A4D1S0 409 aaPredicted RBP20.54■□□□□ 0.88
THBS3-207ENST00000486260 RTL9Q8NET4 1388 aa20.54■□□□□ 0.88
THBS3-207ENST00000486260 SURF6O75683 361 aaKnown RBP20.54■□□□□ 0.88
THBS3-207ENST00000486260 PDE6BP35913 854 aa20.54■□□□□ 0.88
THBS3-207ENST00000486260 CRY2Q49AN0 593 aa20.54■□□□□ 0.88
THBS3-207ENST00000486260 DCTPP1Q9H773 170 aa20.54■□□□□ 0.88
THBS3-207ENST00000486260 EXOC6BQ9Y2D4 811 aa20.54■□□□□ 0.88
THBS3-207ENST00000486260 TAF7LQ5H9L4 462 aa20.53■□□□□ 0.88
THBS3-207ENST00000486260 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
THBS3-207ENST00000486260 SIL1Q9H173 461 aa20.53■□□□□ 0.88
THBS3-207ENST00000486260 SPON1Q9HCB6 807 aa20.53■□□□□ 0.88
THBS3-207ENST00000486260 COPRSQ9NQ92 184 aa20.53■□□□□ 0.88
THBS3-207ENST00000486260 KDM2BQ8NHM5 1336 aa20.53■□□□□ 0.88
THBS3-207ENST00000486260 C10orf71Q711Q0 1435 aa20.53■□□□□ 0.88
THBS3-207ENST00000486260 DDX46Q7L014 1031 aaKnown RBP20.51■□□□□ 0.87
THBS3-207ENST00000486260 NOP58Q9Y2X3 529 aaKnown RBP20.51■□□□□ 0.87
THBS3-207ENST00000486260 TAF1P21675 1872 aa20.51■□□□□ 0.87
THBS3-207ENST00000486260 COL4A1P02462 1669 aa20.5■□□□□ 0.87
THBS3-207ENST00000486260 SRGNP10124 158 aa20.5■□□□□ 0.87
THBS3-207ENST00000486260 CENPQQ7L2Z9 268 aaPredicted RBP20.5■□□□□ 0.87
THBS3-207ENST00000486260 C2CD5Q86YS7 1000 aa20.5■□□□□ 0.87
THBS3-207ENST00000486260 SMC5Q8IY18 1101 aa20.5■□□□□ 0.87
THBS3-207ENST00000486260 CELF1Q92879 486 aaKnown RBP20.5■□□□□ 0.87
THBS3-207ENST00000486260 GCC1Q96CN9 775 aa20.5■□□□□ 0.87
THBS3-207ENST00000486260 CDC5LQ99459 802 aaKnown RBP20.5■□□□□ 0.87
THBS3-207ENST00000486260 APBB1O00213 710 aa20.49■□□□□ 0.87
THBS3-207ENST00000486260 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
THBS3-207ENST00000486260 PUS3Q9BZE2 481 aaKnown RBP20.49■□□□□ 0.87
THBS3-207ENST00000486260 H0YIN7 160 aa20.49■□□□□ 0.87
THBS3-207ENST00000486260 CHRNA5P30532 468 aa20.49■□□□□ 0.87
THBS3-207ENST00000486260 HOXA10P31260 410 aaPredicted RBP20.49■□□□□ 0.87
THBS3-207ENST00000486260 G3BP1Q13283 466 aaKnown RBP eCLIP20.49■□□□□ 0.87
THBS3-207ENST00000486260 OS9Q13438 667 aaPredicted RBP20.49■□□□□ 0.87
THBS3-207ENST00000486260 LRRC24Q50LG9 513 aa20.49■□□□□ 0.87
THBS3-207ENST00000486260 LDHAL6AQ6ZMR3 332 aa20.49■□□□□ 0.87
THBS3-207ENST00000486260 COL11A2P13942 1736 aaPredicted RBP20.48■□□□□ 0.87
THBS3-207ENST00000486260 NPR1P16066 1061 aa20.48■□□□□ 0.87
THBS3-207ENST00000486260 IGHMBP2P38935 993 aaKnown RBP20.48■□□□□ 0.87
THBS3-207ENST00000486260 ANKRD18AQ8IVF6 992 aa20.48■□□□□ 0.87
THBS3-207ENST00000486260 PPP1R1BQ9UD71 204 aaPredicted RBP20.48■□□□□ 0.87
THBS3-207ENST00000486260 EYA2O00167 538 aa20.47■□□□□ 0.87
THBS3-207ENST00000486260 RPS8P62241 208 aaKnown RBP20.47■□□□□ 0.87
THBS3-207ENST00000486260 GRAPQ13588 217 aa20.47■□□□□ 0.87
THBS3-207ENST00000486260 GRAPLQ8TC17 118 aaPredicted RBP20.47■□□□□ 0.87
THBS3-207ENST00000486260 MASTLQ96GX5 879 aa20.47■□□□□ 0.87
THBS3-207ENST00000486260 MPHOSPH8Q99549 860 aa20.47■□□□□ 0.87
THBS3-207ENST00000486260 KIF13BQ9NQT8 1826 aa20.47■□□□□ 0.87
THBS3-207ENST00000486260 HSP90AB4PQ58FF6 505 aa20.46■□□□□ 0.87
THBS3-207ENST00000486260 ATG9AQ7Z3C6 839 aa20.46■□□□□ 0.87
THBS3-207ENST00000486260 KLHL34Q8N239 644 aa20.46■□□□□ 0.87
THBS3-207ENST00000486260 ZNF622Q969S3 477 aaKnown RBP eCLIP20.46■□□□□ 0.87
THBS3-207ENST00000486260 CRAMP1Q96RY5 1269 aa20.46■□□□□ 0.87
THBS3-207ENST00000486260 CNNM1Q9NRU3 951 aa20.46■□□□□ 0.87
THBS3-207ENST00000486260 PDZRN3Q9UPQ7 1066 aa20.46■□□□□ 0.87
THBS3-207ENST00000486260 SPEF2Q9C093 1822 aa20.46■□□□□ 0.87
THBS3-207ENST00000486260 RIPOR2Q9Y4F9 1068 aa20.46■□□□□ 0.87
THBS3-207ENST00000486260 RAB11FIP3O75154 756 aa20.45■□□□□ 0.86
THBS3-207ENST00000486260 CIAO1O76071 339 aa20.45■□□□□ 0.86
THBS3-207ENST00000486260 SASH1O94885 1247 aa20.45■□□□□ 0.86
THBS3-207ENST00000486260 ANKRD45Q5TZF3 282 aa20.45■□□□□ 0.86
THBS3-207ENST00000486260 FBXO3Q9UK99 471 aa20.45■□□□□ 0.86
THBS3-207ENST00000486260 A0A0G2JLW4 131 aa20.44■□□□□ 0.86
THBS3-207ENST00000486260 DPEP1P16444 411 aa20.44■□□□□ 0.86
THBS3-207ENST00000486260 STYK1Q6J9G0 422 aa20.44■□□□□ 0.86
THBS3-207ENST00000486260 BSDC1Q9NW68 430 aaPredicted RBP20.44■□□□□ 0.86
THBS3-207ENST00000486260 LRP5O75197 1615 aa20.44■□□□□ 0.86
THBS3-207ENST00000486260 SMARCA5O60264 1052 aaPredicted RBP20.44■□□□□ 0.86
THBS3-207ENST00000486260 ALDH1B1P30837 517 aa20.44■□□□□ 0.86
THBS3-207ENST00000486260 IL15P40933 162 aaPredicted RBP20.44■□□□□ 0.86
THBS3-207ENST00000486260 BCL11AQ9H165 835 aa20.44■□□□□ 0.86
THBS3-207ENST00000486260 CD2APQ9Y5K6 639 aa20.44■□□□□ 0.86
THBS3-207ENST00000486260 TGFB2P61812 414 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms