RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ZFATQ9P243 1243 aa8.81□□□□□ -1
GCFC2-209ENST00000486016 ZMIZ1Q9ULJ6 1067 aa8.81□□□□□ -1
GCFC2-209ENST00000486016 LILRB5O75023 590 aa8.8□□□□□ -1
GCFC2-209ENST00000486016 MICAL2O94851 1124 aa8.8□□□□□ -1
GCFC2-209ENST00000486016 NFKB1P19838 968 aa8.8□□□□□ -1
GCFC2-209ENST00000486016 ELOAQ14241 798 aaKnown RBP8.8□□□□□ -1
GCFC2-209ENST00000486016 C11orf91Q3C1V1 193 aa8.8□□□□□ -1
GCFC2-209ENST00000486016 NOVA2Q9UNW9 492 aaKnown RBP8.8□□□□□ -1
GCFC2-209ENST00000486016 KRTAP4-8A0A0G2JLE6 195 aa8.79□□□□□ -1
GCFC2-209ENST00000486016 AFF1P51825 1210 aaKnown RBP8.79□□□□□ -1
GCFC2-209ENST00000486016 FKBP5Q13451 457 aaPredicted RBP8.79□□□□□ -1
GCFC2-209ENST00000486016 OCLNQ16625 522 aa8.79□□□□□ -1
GCFC2-209ENST00000486016 ZBTB42B2RXF5 422 aa8.78□□□□□ -1
GCFC2-209ENST00000486016 RFX1P22670 979 aa8.78□□□□□ -1
GCFC2-209ENST00000486016 ARSDP51689 593 aa8.78□□□□□ -1
GCFC2-209ENST00000486016 SWI5Q1ZZU3 235 aa8.78□□□□□ -1
GCFC2-209ENST00000486016 IFT43Q96FT9 208 aa8.78□□□□□ -1
GCFC2-209ENST00000486016 ACIN1Q9UKV3 1341 aaKnown RBP8.78□□□□□ -1
GCFC2-209ENST00000486016 C9orf172C9J069 976 aa8.77□□□□□ -1.01
GCFC2-209ENST00000486016 EPB42P16452 691 aa8.77□□□□□ -1.01
GCFC2-209ENST00000486016 TBC1D8BQ0IIM8 1120 aa8.77□□□□□ -1.01
GCFC2-209ENST00000486016 COX20Q5RI15 118 aa8.77□□□□□ -1.01
GCFC2-209ENST00000486016 PSAPL1Q6NUJ1 521 aa8.77□□□□□ -1.01
GCFC2-209ENST00000486016 TRPM4Q8TD43 1214 aa8.77□□□□□ -1.01
GCFC2-209ENST00000486016 IGFLR1Q9H665 355 aa8.77□□□□□ -1.01
GCFC2-209ENST00000486016 A0A0A0MRY4 1105 aa8.76□□□□□ -1.01
GCFC2-209ENST00000486016 EGFRP00533 1210 aa8.76□□□□□ -1.01
GCFC2-209ENST00000486016 TARSP26639 723 aaKnown RBP8.76□□□□□ -1.01
GCFC2-209ENST00000486016 ADGRE1Q14246 886 aa8.76□□□□□ -1.01
GCFC2-209ENST00000486016 NUDT8Q8WV74 236 aa8.76□□□□□ -1.01
GCFC2-209ENST00000486016 PRIMPOLQ96LW4 560 aa8.76□□□□□ -1.01
GCFC2-209ENST00000486016 PNMA5Q96PV4 448 aa8.76□□□□□ -1.01
GCFC2-209ENST00000486016 JPH1Q9HDC5 661 aaPredicted RBP8.76□□□□□ -1.01
GCFC2-209ENST00000486016 SELPP16109 830 aa8.75□□□□□ -1.01
GCFC2-209ENST00000486016 GRIK5Q16478 980 aa8.75□□□□□ -1.01
GCFC2-209ENST00000486016 TRAPPC3LQ5T215 181 aa8.75□□□□□ -1.01
GCFC2-209ENST00000486016 STK32AQ8WU08 396 aa8.75□□□□□ -1.01
GCFC2-209ENST00000486016 VTI1AQ96AJ9 217 aa8.75□□□□□ -1.01
GCFC2-209ENST00000486016 RTCBQ9Y3I0 505 aaKnown RBP8.75□□□□□ -1.01
GCFC2-209ENST00000486016 SASH3O75995 380 aa8.74□□□□□ -1.01
GCFC2-209ENST00000486016 PLAURQ03405 335 aa8.74□□□□□ -1.01
GCFC2-209ENST00000486016 MBTPS1Q14703 1052 aa8.74□□□□□ -1.01
GCFC2-209ENST00000486016 FAM26DQ5JW98 314 aa8.74□□□□□ -1.01
GCFC2-209ENST00000486016 DHX32Q7L7V1 743 aaKnown RBP8.74□□□□□ -1.01
GCFC2-209ENST00000486016 LPIN3Q9BQK8 851 aa8.74□□□□□ -1.01
GCFC2-209ENST00000486016 PRMT3O60678 531 aa8.73□□□□□ -1.01
GCFC2-209ENST00000486016 ELNP15502 786 aa8.73□□□□□ -1.01
GCFC2-209ENST00000486016 TXNRD3Q86VQ6 643 aa8.73□□□□□ -1.01
GCFC2-209ENST00000486016 TREML1Q86YW5 311 aa8.73□□□□□ -1.01
GCFC2-209ENST00000486016 SAP130Q9H0E3 1048 aa8.73□□□□□ -1.01
GCFC2-209ENST00000486016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.73□□□□□ -1.012e-6■■■■■ 96.1
GCFC2-209ENST00000486016 FRRS1LQ9P0K9 344 aa8.73□□□□□ -1.01
GCFC2-209ENST00000486016 USP20Q9Y2K6 914 aa8.73□□□□□ -1.01
GCFC2-209ENST00000486016 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
GCFC2-209ENST00000486016 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.72□□□□□ -1.01
GCFC2-209ENST00000486016 RGS9O75916 674 aaPredicted RBP8.72□□□□□ -1.01
GCFC2-209ENST00000486016 ATG7O95352 703 aa8.72□□□□□ -1.01
GCFC2-209ENST00000486016 GPLD1P80108 840 aa8.72□□□□□ -1.01
GCFC2-209ENST00000486016 PCSK7Q16549 785 aa8.72□□□□□ -1.01
GCFC2-209ENST00000486016 PERM1Q5SV97 790 aa8.72□□□□□ -1.01
GCFC2-209ENST00000486016 KRT25Q7Z3Z0 450 aa8.72□□□□□ -1.01
GCFC2-209ENST00000486016 FAM35AQ86V20 835 aa8.72□□□□□ -1.01
GCFC2-209ENST00000486016 ETFBKMTQ8IXQ9 262 aa8.72□□□□□ -1.01
GCFC2-209ENST00000486016 TTC9Q92623 222 aa8.72□□□□□ -1.01
GCFC2-209ENST00000486016 COL26A1Q96A83 441 aa8.72□□□□□ -1.01
GCFC2-209ENST00000486016 CAPN12Q6ZSI9 719 aa8.71□□□□□ -1.02
GCFC2-209ENST00000486016 FMR1NBQ8N0W7 255 aaPredicted RBP8.71□□□□□ -1.02
GCFC2-209ENST00000486016 TP53INP1Q96A56 240 aa8.71□□□□□ -1.02
GCFC2-209ENST00000486016 LENG1Q96BZ8 264 aaPredicted RBP8.71□□□□□ -1.02
GCFC2-209ENST00000486016 TNFRSF10BO14763 440 aa8.7□□□□□ -1.02
GCFC2-209ENST00000486016 RARAP10276 462 aa8.7□□□□□ -1.02
GCFC2-209ENST00000486016 CPB1P15086 417 aa8.7□□□□□ -1.02
GCFC2-209ENST00000486016 NRLP54845 237 aa8.7□□□□□ -1.02
GCFC2-209ENST00000486016 NRG1Q02297 640 aaPredicted RBP8.7□□□□□ -1.02
GCFC2-209ENST00000486016 DMRTC2Q8IXT2 367 aaPredicted RBP8.7□□□□□ -1.02
GCFC2-209ENST00000486016 ZMYND15Q9H091 742 aa8.7□□□□□ -1.02
GCFC2-209ENST00000486016 TLR7Q9NYK1 1049 aaKnown RBP8.7□□□□□ -1.02
GCFC2-209ENST00000486016 CXXC1Q9P0U4 656 aaPredicted RBP8.7□□□□□ -1.02
GCFC2-209ENST00000486016 SLAIN2Q9P270 581 aa8.7□□□□□ -1.02
GCFC2-209ENST00000486016 HOXD8P13378 290 aaPredicted RBP8.69□□□□□ -1.02
GCFC2-209ENST00000486016 TMEM164Q5U3C3 297 aa8.69□□□□□ -1.02
GCFC2-209ENST00000486016 MSL1Q68DK7 614 aa8.69□□□□□ -1.02
GCFC2-209ENST00000486016 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
GCFC2-209ENST00000486016 XYLBO75191 536 aa8.68□□□□□ -1.02
GCFC2-209ENST00000486016 RAC1P63000 192 aa8.68□□□□□ -1.02
GCFC2-209ENST00000486016 MLLT1Q03111 559 aaPredicted RBP8.68□□□□□ -1.02
GCFC2-209ENST00000486016 C16orf46Q6P387 395 aa8.68□□□□□ -1.02
GCFC2-209ENST00000486016 RGL4Q8IZJ4 473 aa8.68□□□□□ -1.02
GCFC2-209ENST00000486016 TRIP4Q15650 581 aaPredicted RBP8.67□□□□□ -1.02
GCFC2-209ENST00000486016 MCTP1Q6DN14 999 aa8.67□□□□□ -1.02
GCFC2-209ENST00000486016 CMTR1Q8N1G2 835 aaKnown RBP8.67□□□□□ -1.02
GCFC2-209ENST00000486016 DTWD1Q8N5C7 304 aa8.67□□□□□ -1.02
GCFC2-209ENST00000486016 CLP1Q92989 425 aaKnown RBP8.67□□□□□ -1.02
GCFC2-209ENST00000486016 SSBP4Q9BWG4 385 aaPredicted RBP8.67□□□□□ -1.02
GCFC2-209ENST00000486016 MMP20O60882 483 aa8.66□□□□□ -1.02
GCFC2-209ENST00000486016 ELMSAN1Q6PJG2 1045 aa8.66□□□□□ -1.02
GCFC2-209ENST00000486016 FBXO11Q86XK2 927 aa8.66□□□□□ -1.02
GCFC2-209ENST00000486016 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.02
GCFC2-209ENST00000486016 HFE2Q6ZVN8 426 aa8.65□□□□□ -1.02
GCFC2-209ENST00000486016 DEAF1O75398 565 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms