RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 NLRP3Q96P20 1036 aa15.42■□□□□ 0.06
HLA-DOA-204ENST00000485901 ZNF521Q96K83 1311 aa15.42■□□□□ 0.06
HLA-DOA-204ENST00000485901 CDHR2Q9BYE9 1310 aa15.42■□□□□ 0.06
HLA-DOA-204ENST00000485901 FANCIQ9NVI1 1328 aa15.42■□□□□ 0.06
HLA-DOA-204ENST00000485901 ABCC12Q96J65 1359 aa15.41■□□□□ 0.06
HLA-DOA-204ENST00000485901 SCNN1DP51172 638 aa15.41■□□□□ 0.06
HLA-DOA-204ENST00000485901 MAP1SQ66K74 1059 aaPredicted RBP15.41■□□□□ 0.06
HLA-DOA-204ENST00000485901 NUTM1Q86Y26 1132 aa15.41■□□□□ 0.06
HLA-DOA-204ENST00000485901 HHIPL1Q96JK4 782 aa15.41■□□□□ 0.06
HLA-DOA-204ENST00000485901 RTFDC1Q9BY42 306 aaPredicted RBP15.41■□□□□ 0.06
HLA-DOA-204ENST00000485901 THSD7BQ9C0I4 1608 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 PPEF1O14829 653 aaPredicted RBP15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 BBOX1O75936 387 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 NTSR2O95665 410 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 MAP2K2P36507 400 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 HSP90AB3PQ58FF7 597 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 SUSD4Q5VX71 490 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 ANKRD13DQ6ZTN6 518 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 NIM1KQ8IY84 436 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 ZC3H15Q8WU90 426 aaKnown RBP15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 ATP6V0A2Q9Y487 856 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 UBN2Q6ZU65 1347 aa15.4■□□□□ 0.06
HLA-DOA-204ENST00000485901 CA12O43570 354 aa15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 HSPA8P11142 646 aaKnown RBP15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 LBX1P52954 281 aa15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 EXOSC9Q06265 439 aaKnown RBP15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 TMC4Q7Z404 712 aa15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 PLBD2Q8NHP8 589 aa15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 BEGAINQ9BUH8 593 aa15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 STK31Q9BXU1 1019 aa15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 ADARB2Q9NS39 739 aaKnown RBP15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 PGAP2Q9UHJ9 254 aa15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 ABT1Q9ULW3 272 aaKnown RBP15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 GJA3Q9Y6H8 435 aa15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 ANKRD36CQ5JPF3 1778 aa15.39■□□□□ 0.05
HLA-DOA-204ENST00000485901 E9PSI1 815 aa15.38■□□□□ 0.05
HLA-DOA-204ENST00000485901 VAMP4O75379 141 aa15.38■□□□□ 0.05
HLA-DOA-204ENST00000485901 UTP14AQ9BVJ6 771 aaKnown RBP15.38■□□□□ 0.05
HLA-DOA-204ENST00000485901 GPRC5DQ9NZD1 345 aa15.38■□□□□ 0.05
HLA-DOA-204ENST00000485901 ZNRF3Q9ULT6 936 aa15.38■□□□□ 0.05
HLA-DOA-204ENST00000485901 LTBP1Q14766 1721 aa15.37■□□□□ 0.05
HLA-DOA-204ENST00000485901 PPIP5K2O43314 1243 aa15.37■□□□□ 0.05
HLA-DOA-204ENST00000485901 GPTP24298 496 aa15.37■□□□□ 0.05
HLA-DOA-204ENST00000485901 EPS15P42566 896 aa15.37■□□□□ 0.05
HLA-DOA-204ENST00000485901 TCIRG1Q13488 830 aa15.37■□□□□ 0.05
HLA-DOA-204ENST00000485901 SP8Q8IXZ3 490 aa15.37■□□□□ 0.05
HLA-DOA-204ENST00000485901 TLL2Q9Y6L7 1015 aa15.37■□□□□ 0.05
HLA-DOA-204ENST00000485901 COL4A5P29400 1685 aa15.36■□□□□ 0.05
HLA-DOA-204ENST00000485901 DDX58O95786 925 aaKnown RBP15.36■□□□□ 0.05
HLA-DOA-204ENST00000485901 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
HLA-DOA-204ENST00000485901 TNIP1Q15025 636 aa15.36■□□□□ 0.05
HLA-DOA-204ENST00000485901 RIC3Q7Z5B4 369 aa15.36■□□□□ 0.05
HLA-DOA-204ENST00000485901 CAPNS2Q96L46 248 aa15.36■□□□□ 0.05
HLA-DOA-204ENST00000485901 GPR101Q96P66 508 aaPredicted RBP15.36■□□□□ 0.05
HLA-DOA-204ENST00000485901 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
HLA-DOA-204ENST00000485901 SLFN5Q08AF3 891 aa15.35■□□□□ 0.05
HLA-DOA-204ENST00000485901 CST9Q5W186 159 aa15.35■□□□□ 0.05
HLA-DOA-204ENST00000485901 TCERG1O14776 1098 aaKnown RBP15.34■□□□□ 0.05
HLA-DOA-204ENST00000485901 KIAA2012Q0VF49 1180 aa15.34■□□□□ 0.05
HLA-DOA-204ENST00000485901 ABHD8Q96I13 439 aa15.34■□□□□ 0.05
HLA-DOA-204ENST00000485901 RGS19P49795 217 aa15.33■□□□□ 0.04
HLA-DOA-204ENST00000485901 CXCL9Q07325 125 aa15.33■□□□□ 0.04
HLA-DOA-204ENST00000485901 CIAPIN1Q6FI81 312 aa15.33■□□□□ 0.04
HLA-DOA-204ENST00000485901 DPP8Q6V1X1 898 aaPredicted RBP15.33■□□□□ 0.04
HLA-DOA-204ENST00000485901 SAPCD2Q86UD0 394 aa15.33■□□□□ 0.04
HLA-DOA-204ENST00000485901 MPNDQ8N594 471 aa15.33■□□□□ 0.04
HLA-DOA-204ENST00000485901 TRIM28Q13263 835 aaKnown RBP15.32■□□□□ 0.04
HLA-DOA-204ENST00000485901 AOC3Q16853 763 aa15.32■□□□□ 0.04
HLA-DOA-204ENST00000485901 DDX46Q7L014 1031 aaKnown RBP15.32■□□□□ 0.04
HLA-DOA-204ENST00000485901 CDC37L1Q7L3B6 337 aa15.32■□□□□ 0.04
HLA-DOA-204ENST00000485901 NLRP10Q86W26 655 aa15.32■□□□□ 0.04
HLA-DOA-204ENST00000485901 DPF2Q92785 391 aa15.32■□□□□ 0.04
HLA-DOA-204ENST00000485901 CDCA7LQ96GN5 454 aa15.32■□□□□ 0.04
HLA-DOA-204ENST00000485901 ABCC4O15439 1325 aa15.32■□□□□ 0.04
HLA-DOA-204ENST00000485901 BRPF1P55201 1214 aaPredicted RBP15.31■□□□□ 0.04
HLA-DOA-204ENST00000485901 GRAPQ13588 217 aa15.31■□□□□ 0.04
HLA-DOA-204ENST00000485901 KSR2Q6VAB6 950 aa15.31■□□□□ 0.04
HLA-DOA-204ENST00000485901 TRMT2AQ8IZ69 625 aaKnown RBP15.31■□□□□ 0.04
HLA-DOA-204ENST00000485901 GRAPLQ8TC17 118 aaPredicted RBP15.31■□□□□ 0.04
HLA-DOA-204ENST00000485901 ISCA1Q9BUE6 129 aa15.31■□□□□ 0.04
HLA-DOA-204ENST00000485901 SH3TC1Q8TE82 1336 aa15.31■□□□□ 0.04
HLA-DOA-204ENST00000485901 LAMB2P55268 1798 aa15.31■□□□□ 0.04
HLA-DOA-204ENST00000485901 ATP5J2-PTCD1G3V325 749 aa15.3■□□□□ 0.04
HLA-DOA-204ENST00000485901 H7C1D1 291 aa15.3■□□□□ 0.04
HLA-DOA-204ENST00000485901 HNRNPUQ00839 825 aaKnown RBP eCLIP15.3■□□□□ 0.04
HLA-DOA-204ENST00000485901 C3orf67Q6ZVT6 689 aa15.3■□□□□ 0.04
HLA-DOA-204ENST00000485901 G2E3Q7L622 706 aa15.3■□□□□ 0.04
HLA-DOA-204ENST00000485901 METTL22Q9BUU2 404 aaPredicted RBP15.3■□□□□ 0.04
HLA-DOA-204ENST00000485901 TRMT112Q9UI30 125 aaKnown RBP15.3■□□□□ 0.04
HLA-DOA-204ENST00000485901 PI4KAP2A4QPH2 592 aa15.29■□□□□ 0.04
HLA-DOA-204ENST00000485901 GMPSP49915 693 aaPredicted RBP15.29■□□□□ 0.04
HLA-DOA-204ENST00000485901 FLIIQ13045 1269 aa15.29■□□□□ 0.04
HLA-DOA-204ENST00000485901 CYP4F22Q6NT55 531 aa15.29■□□□□ 0.04
HLA-DOA-204ENST00000485901 PI4KAP1Q8N8J0 262 aa15.29■□□□□ 0.04
HLA-DOA-204ENST00000485901 ZNF428Q96B54 188 aa15.29■□□□□ 0.04
HLA-DOA-204ENST00000485901 BCL2L13Q9BXK5 485 aa15.29■□□□□ 0.04
HLA-DOA-204ENST00000485901 MAP3K2Q9Y2U5 619 aa15.29■□□□□ 0.04
HLA-DOA-204ENST00000485901 CELF2O95319 508 aaKnown RBP15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 HSP90B1P14625 803 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms