RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 RFX5P48382 616 aaPredicted RBP19.83■□□□□ 0.77
APOE-205ENST00000485628 LMBR1LQ6UX01 489 aa19.83■□□□□ 0.77
APOE-205ENST00000485628 PNMA6EA0A0J9YXQ4 647 aa19.82■□□□□ 0.76
APOE-205ENST00000485628 ST5P78524 1137 aa19.82■□□□□ 0.76
APOE-205ENST00000485628 CCDC24Q8N4L8 307 aa19.82■□□□□ 0.76
APOE-205ENST00000485628 KIAA1551Q9HCM1 1747 aa19.82■□□□□ 0.76
APOE-205ENST00000485628 GTF2E1P29083 439 aaPredicted RBP19.81■□□□□ 0.76
APOE-205ENST00000485628 NLRP3Q96P20 1036 aa19.81■□□□□ 0.76
APOE-205ENST00000485628 SPON1Q9HCB6 807 aa19.81■□□□□ 0.76
APOE-205ENST00000485628 COL4A1P02462 1669 aa19.81■□□□□ 0.76
APOE-205ENST00000485628 HOXA10P31260 410 aaPredicted RBP19.8■□□□□ 0.76
APOE-205ENST00000485628 HDAC1Q13547 482 aaPredicted RBP19.8■□□□□ 0.76
APOE-205ENST00000485628 COL11A2P13942 1736 aaPredicted RBP19.79■□□□□ 0.76
APOE-205ENST00000485628 POLD1P28340 1107 aa19.79■□□□□ 0.76
APOE-205ENST00000485628 GREM2Q9H772 168 aa19.79■□□□□ 0.76
APOE-205ENST00000485628 DLEC1Q9Y238 1755 aa19.78■□□□□ 0.76
APOE-205ENST00000485628 SRGNP10124 158 aa19.78■□□□□ 0.76
APOE-205ENST00000485628 PTPN12Q05209 780 aaKnown RBP19.78■□□□□ 0.76
APOE-205ENST00000485628 PDZRN3Q9UPQ7 1066 aa19.78■□□□□ 0.76
APOE-205ENST00000485628 NOP58Q9Y2X3 529 aaKnown RBP19.78■□□□□ 0.76
APOE-205ENST00000485628 TAF1P21675 1872 aa19.77■□□□□ 0.76
APOE-205ENST00000485628 PDE6BP35913 854 aa19.77■□□□□ 0.76
APOE-205ENST00000485628 FAM161AQ3B820 660 aa19.77■□□□□ 0.76
APOE-205ENST00000485628 CCDC152Q4G0S7 254 aa19.77■□□□□ 0.76
APOE-205ENST00000485628 COPRSQ9NQ92 184 aa19.77■□□□□ 0.76
APOE-205ENST00000485628 LRP5O75197 1615 aa19.76■□□□□ 0.75
APOE-205ENST00000485628 SRGAP3O43295 1099 aa19.76■□□□□ 0.75
APOE-205ENST00000485628 IGHDP01880 384 aa19.76■□□□□ 0.75
APOE-205ENST00000485628 KCNA3P22001 575 aa19.76■□□□□ 0.75
APOE-205ENST00000485628 CD2APQ9Y5K6 639 aa19.76■□□□□ 0.75
APOE-205ENST00000485628 ITGA6P23229 1130 aa19.75■□□□□ 0.75
APOE-205ENST00000485628 CRAMP1Q96RY5 1269 aa19.75■□□□□ 0.75
APOE-205ENST00000485628 DCTPP1Q9H773 170 aa19.75■□□□□ 0.75
APOE-205ENST00000485628 SEC31BQ9NQW1 1179 aa19.75■□□□□ 0.75
APOE-205ENST00000485628 PPP4R2Q9NY27 417 aa19.75■□□□□ 0.75
APOE-205ENST00000485628 TGFB2P61812 414 aa19.74■□□□□ 0.75
APOE-205ENST00000485628 BRCA1P38398 1863 aaKnown RBP19.73■□□□□ 0.75
APOE-205ENST00000485628 NPHP1O15259 732 aa19.73■□□□□ 0.75
APOE-205ENST00000485628 HMMRO75330 724 aa19.73■□□□□ 0.75
APOE-205ENST00000485628 IFIT5Q13325 482 aaKnown RBP19.73■□□□□ 0.75
APOE-205ENST00000485628 FBXO3Q9UK99 471 aa19.73■□□□□ 0.75
APOE-205ENST00000485628 KDM2BQ8NHM5 1336 aa19.73■□□□□ 0.75
APOE-205ENST00000485628 ANKRD18BA2A2Z9 1011 aa19.72■□□□□ 0.75
APOE-205ENST00000485628 NPR1P16066 1061 aa19.72■□□□□ 0.75
APOE-205ENST00000485628 CCDC57Q2TAC2 916 aa19.72■□□□□ 0.75
APOE-205ENST00000485628 STYK1Q6J9G0 422 aa19.72■□□□□ 0.75
APOE-205ENST00000485628 MASTLQ96GX5 879 aa19.72■□□□□ 0.75
APOE-205ENST00000485628 CCDC85AQ96PX6 553 aaPredicted RBP19.72■□□□□ 0.75
APOE-205ENST00000485628 GRAPQ13588 217 aa19.71■□□□□ 0.75
APOE-205ENST00000485628 ATG9AQ7Z3C6 839 aa19.71■□□□□ 0.75
APOE-205ENST00000485628 SMC5Q8IY18 1101 aa19.71■□□□□ 0.75
APOE-205ENST00000485628 KLHDC4Q8TBB5 520 aa19.71■□□□□ 0.75
APOE-205ENST00000485628 GRAPLQ8TC17 118 aaPredicted RBP19.71■□□□□ 0.75
APOE-205ENST00000485628 CELF1Q92879 486 aaKnown RBP19.71■□□□□ 0.75
APOE-205ENST00000485628 RWDD1Q9H446 243 aaPredicted RBP19.71■□□□□ 0.75
APOE-205ENST00000485628 PA2G4Q9UQ80 394 aaKnown RBP19.71■□□□□ 0.75
APOE-205ENST00000485628 RIPOR2Q9Y4F9 1068 aa19.71■□□□□ 0.75
APOE-205ENST00000485628 H0YIN7 160 aa19.7■□□□□ 0.74
APOE-205ENST00000485628 CIAO1O76071 339 aa19.7■□□□□ 0.74
APOE-205ENST00000485628 CHRNA5P30532 468 aa19.7■□□□□ 0.74
APOE-205ENST00000485628 RPS8P62241 208 aaKnown RBP19.7■□□□□ 0.74
APOE-205ENST00000485628 DDX46Q7L014 1031 aaKnown RBP19.7■□□□□ 0.74
APOE-205ENST00000485628 C2CD5Q86YS7 1000 aa19.7■□□□□ 0.74
APOE-205ENST00000485628 RBM17Q96I25 401 aaKnown RBP19.7■□□□□ 0.74
APOE-205ENST00000485628 ZNF594Q96JF6 807 aaPredicted RBP19.7■□□□□ 0.74
APOE-205ENST00000485628 BSDC1Q9NW68 430 aaPredicted RBP19.7■□□□□ 0.74
APOE-205ENST00000485628 CDC5LQ99459 802 aaKnown RBP19.69■□□□□ 0.74
APOE-205ENST00000485628 GTF3C3Q9Y5Q9 886 aa19.69■□□□□ 0.74
APOE-205ENST00000485628 LRRC37AA6NMS7 1700 aa19.68■□□□□ 0.74
APOE-205ENST00000485628 SLX4Q8IY92 1834 aa19.68■□□□□ 0.74
APOE-205ENST00000485628 EYA2O00167 538 aa19.68■□□□□ 0.74
APOE-205ENST00000485628 BBOX1O75936 387 aa19.68■□□□□ 0.74
APOE-205ENST00000485628 DPEP1P16444 411 aa19.68■□□□□ 0.74
APOE-205ENST00000485628 C7orf43Q8WVR3 580 aa19.68■□□□□ 0.74
APOE-205ENST00000485628 RPGRQ92834 1020 aaKnown RBP19.68■□□□□ 0.74
APOE-205ENST00000485628 PUS3Q9BZE2 481 aaKnown RBP19.68■□□□□ 0.74
APOE-205ENST00000485628 CHMP3Q9Y3E7 222 aa19.68■□□□□ 0.74
APOE-205ENST00000485628 A0A1B0GUL6 1792 aa19.67■□□□□ 0.74
APOE-205ENST00000485628 SASH1O94885 1247 aa19.67■□□□□ 0.74
APOE-205ENST00000485628 ALDH1B1P30837 517 aa19.67■□□□□ 0.74
APOE-205ENST00000485628 LRRC24Q50LG9 513 aa19.67■□□□□ 0.74
APOE-205ENST00000485628 ANKRD18AQ8IVF6 992 aa19.67■□□□□ 0.74
APOE-205ENST00000485628 GCC1Q96CN9 775 aa19.67■□□□□ 0.74
APOE-205ENST00000485628 SRCAPQ6ZRS2 3230 aa19.67■□□□□ 0.74
APOE-205ENST00000485628 SPEF2Q9C093 1822 aa19.67■□□□□ 0.74
APOE-205ENST00000485628 SNED1Q8TER0 1413 aa19.67■□□□□ 0.74
APOE-205ENST00000485628 A0A0G2JLW4 131 aa19.66■□□□□ 0.74
APOE-205ENST00000485628 SURF6O75683 361 aaKnown RBP19.66■□□□□ 0.74
APOE-205ENST00000485628 LDHAL6AQ6ZMR3 332 aa19.66■□□□□ 0.74
APOE-205ENST00000485628 VGLL2Q8N8G2 317 aa19.66■□□□□ 0.74
APOE-205ENST00000485628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.66■□□□□ 0.74
APOE-205ENST00000485628 LTBP1Q14766 1721 aa19.65■□□□□ 0.74
APOE-205ENST00000485628 RAB11FIP3O75154 756 aa19.65■□□□□ 0.74
APOE-205ENST00000485628 TMC4Q7Z404 712 aa19.65■□□□□ 0.74
APOE-205ENST00000485628 CNKSR1Q969H4 720 aa19.65■□□□□ 0.74
APOE-205ENST00000485628 MINPP1Q9UNW1 487 aa19.65■□□□□ 0.74
APOE-205ENST00000485628 EXOC6BQ9Y2D4 811 aa19.65■□□□□ 0.74
APOE-205ENST00000485628 IGHMBP2P38935 993 aaKnown RBP19.64■□□□□ 0.73
APOE-205ENST00000485628 IL15P40933 162 aaPredicted RBP19.64■□□□□ 0.73
APOE-205ENST00000485628 HSP90AB4PQ58FF6 505 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms