RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 SIAH2O43255 324 aa10.3□□□□□ -0.76
CLRN1-206ENST00000485607 FDX1P10109 184 aa10.3□□□□□ -0.76
CLRN1-206ENST00000485607 VEGFBP49765 207 aa10.3□□□□□ -0.76
CLRN1-206ENST00000485607 CDCA8Q53HL2 280 aa10.3□□□□□ -0.76
CLRN1-206ENST00000485607 FHDC1Q9C0D6 1143 aaPredicted RBP10.3□□□□□ -0.76
CLRN1-206ENST00000485607 FAM217BQ9NTX9 383 aaPredicted RBP10.3□□□□□ -0.76
CLRN1-206ENST00000485607 EMILIN1Q9Y6C2 1016 aa10.3□□□□□ -0.76
CLRN1-206ENST00000485607 SMG6Q86US8 1419 aaKnown RBP10.3□□□□□ -0.76
CLRN1-206ENST00000485607 MS4A1P11836 297 aa10.29□□□□□ -0.76
CLRN1-206ENST00000485607 IRF7Q92985 503 aa10.29□□□□□ -0.76
CLRN1-206ENST00000485607 PNPLA7Q6ZV29 1317 aa10.29□□□□□ -0.76
CLRN1-206ENST00000485607 YY1P25490 414 aa10.28□□□□□ -0.76
CLRN1-206ENST00000485607 GMPRP36959 345 aa10.28□□□□□ -0.76
CLRN1-206ENST00000485607 SH3BP2P78314 561 aa10.28□□□□□ -0.76
CLRN1-206ENST00000485607 SLC27A3Q5K4L6 730 aa10.28□□□□□ -0.76
CLRN1-206ENST00000485607 TRIM46Q7Z4K8 759 aa10.28□□□□□ -0.76
CLRN1-206ENST00000485607 RAPGEF4Q8WZA2 1011 aa10.28□□□□□ -0.76
CLRN1-206ENST00000485607 SYT17Q9BSW7 474 aa10.28□□□□□ -0.76
CLRN1-206ENST00000485607 TIMELESSQ9UNS1 1208 aa10.28□□□□□ -0.76
CLRN1-206ENST00000485607 KIF24Q5T7B8 1368 aa10.27□□□□□ -0.76
CLRN1-206ENST00000485607 CCNYL3P0C7X3 344 aa10.27□□□□□ -0.77
CLRN1-206ENST00000485607 LINC01559Q495D7 138 aa10.27□□□□□ -0.77
CLRN1-206ENST00000485607 CLSPNQ9HAW4 1339 aa10.27□□□□□ -0.77
CLRN1-206ENST00000485607 LY75O60449 1722 aa10.27□□□□□ -0.77
CLRN1-206ENST00000485607 ANKRD26Q9UPS8 1709 aa10.27□□□□□ -0.77
CLRN1-206ENST00000485607 NCAPD2Q15021 1401 aa10.26□□□□□ -0.77
CLRN1-206ENST00000485607 PPM1GO15355 546 aaPredicted RBP10.26□□□□□ -0.77
CLRN1-206ENST00000485607 CYP27B1O15528 508 aa10.26□□□□□ -0.77
CLRN1-206ENST00000485607 TATP17735 454 aaPredicted RBP10.26□□□□□ -0.77
CLRN1-206ENST00000485607 ARXQ96QS3 562 aa10.26□□□□□ -0.77
CLRN1-206ENST00000485607 POLR3GLQ9BT43 218 aa10.26□□□□□ -0.77
CLRN1-206ENST00000485607 CCNL1Q9UK58 526 aaPredicted RBP10.26□□□□□ -0.77
CLRN1-206ENST00000485607 TOGARAM1Q9Y4F4 1720 aa10.26□□□□□ -0.77
CLRN1-206ENST00000485607 CGNL1Q0VF96 1302 aa10.26□□□□□ -0.77
CLRN1-206ENST00000485607 TUBGCP6Q96RT7 1819 aa10.26□□□□□ -0.77
CLRN1-206ENST00000485607 ZSCAN1Q8NBB4 408 aa10.25□□□□□ -0.77
CLRN1-206ENST00000485607 BAP1Q92560 729 aa10.25□□□□□ -0.77
CLRN1-206ENST00000485607 TFCP2L1Q9NZI6 479 aa10.25□□□□□ -0.77
CLRN1-206ENST00000485607 PCDH11XQ9BZA7 1347 aa10.25□□□□□ -0.77
CLRN1-206ENST00000485607 PCDH11YQ9BZA8 1340 aa10.25□□□□□ -0.77
CLRN1-206ENST00000485607 GOLGB1Q14789 3259 aaKnown RBP10.25□□□□□ -0.77
CLRN1-206ENST00000485607 HSPA5P11021 654 aaKnown RBP10.24□□□□□ -0.77
CLRN1-206ENST00000485607 ZFP42Q96MM3 310 aa10.24□□□□□ -0.77
CLRN1-206ENST00000485607 UNC93B1Q9H1C4 597 aa10.24□□□□□ -0.77
CLRN1-206ENST00000485607 POLKQ9UBT6 870 aa10.24□□□□□ -0.77
CLRN1-206ENST00000485607 PCDHGC3Q9UN70 934 aa10.24□□□□□ -0.77
CLRN1-206ENST00000485607 MAP3K5Q99683 1374 aa10.24□□□□□ -0.77
CLRN1-206ENST00000485607 QSER1Q2KHR3 1735 aa10.24□□□□□ -0.77
CLRN1-206ENST00000485607 PKD1L3Q7Z443 1732 aa10.24□□□□□ -0.77
CLRN1-206ENST00000485607 TNNT2P45379 298 aaPredicted RBP10.23□□□□□ -0.77
CLRN1-206ENST00000485607 MPRIPQ6WCQ1 1025 aa10.23□□□□□ -0.77
CLRN1-206ENST00000485607 NPAS3Q8IXF0 933 aa10.23□□□□□ -0.77
CLRN1-206ENST00000485607 WASHC2AQ641Q2 1341 aa10.23□□□□□ -0.77
CLRN1-206ENST00000485607 PALLDQ8WX93 1383 aa10.23□□□□□ -0.77
CLRN1-206ENST00000485607 KAT6BQ8WYB5 2073 aa10.22□□□□□ -0.77
CLRN1-206ENST00000485607 COL24A1Q17RW2 1714 aa10.22□□□□□ -0.77
CLRN1-206ENST00000485607 AMIGO3Q86WK7 504 aa10.22□□□□□ -0.77
CLRN1-206ENST00000485607 COL23A1Q86Y22 540 aaPredicted RBP10.22□□□□□ -0.77
CLRN1-206ENST00000485607 EVA1BQ9NVM1 165 aa10.22□□□□□ -0.77
CLRN1-206ENST00000485607 TLL2Q9Y6L7 1015 aa10.22□□□□□ -0.77
CLRN1-206ENST00000485607 NDUFV2P19404 249 aa10.21□□□□□ -0.77
CLRN1-206ENST00000485607 SSTR3P32745 418 aaPredicted RBP10.21□□□□□ -0.77
CLRN1-206ENST00000485607 EIF4G2P78344 907 aaKnown RBP eCLIP10.21□□□□□ -0.77
CLRN1-206ENST00000485607 SCARF1Q14162 830 aa10.21□□□□□ -0.77
CLRN1-206ENST00000485607 EIF4A2Q14240 407 aaKnown RBP10.21□□□□□ -0.77
CLRN1-206ENST00000485607 PTPRNQ16849 979 aa10.21□□□□□ -0.77
CLRN1-206ENST00000485607 MSL1Q68DK7 614 aa10.21□□□□□ -0.77
CLRN1-206ENST00000485607 SMIM5Q71RC9 77 aa10.21□□□□□ -0.77
CLRN1-206ENST00000485607 NLGN2Q8NFZ4 835 aa10.21□□□□□ -0.77
CLRN1-206ENST00000485607 C5P01031 1676 aa10.21□□□□□ -0.78
CLRN1-206ENST00000485607 POLD1P28340 1107 aa10.2□□□□□ -0.78
CLRN1-206ENST00000485607 KCNH2Q12809 1159 aa10.2□□□□□ -0.78
CLRN1-206ENST00000485607 NNTQ13423 1086 aa10.2□□□□□ -0.78
CLRN1-206ENST00000485607 PRR7Q8TB68 274 aa10.2□□□□□ -0.78
CLRN1-206ENST00000485607 CCER1Q8TC90 406 aaPredicted RBP10.2□□□□□ -0.78
CLRN1-206ENST00000485607 PIGBQ92521 554 aa10.2□□□□□ -0.78
CLRN1-206ENST00000485607 PANK3Q9H999 370 aa10.2□□□□□ -0.78
CLRN1-206ENST00000485607 H3BM21 787 aa10.19□□□□□ -0.78
CLRN1-206ENST00000485607 VARSP26640 1264 aaKnown RBP10.19□□□□□ -0.78
CLRN1-206ENST00000485607 SPIRE2Q8WWL2 714 aa10.19□□□□□ -0.78
CLRN1-206ENST00000485607 SPG7Q9UQ90 795 aa10.19□□□□□ -0.78
CLRN1-206ENST00000485607 PHKG2P15735 406 aa10.18□□□□□ -0.78
CLRN1-206ENST00000485607 CTHP32929 405 aa10.18□□□□□ -0.78
CLRN1-206ENST00000485607 ZNF511Q8NB15 262 aa10.18□□□□□ -0.78
CLRN1-206ENST00000485607 ZNF784Q8NCA9 323 aaPredicted RBP10.18□□□□□ -0.78
CLRN1-206ENST00000485607 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
CLRN1-206ENST00000485607 MAP2P11137 1827 aaKnown RBP10.18□□□□□ -0.78
CLRN1-206ENST00000485607 ITGB4P16144 1822 aa10.18□□□□□ -0.78
CLRN1-206ENST00000485607 C4BP0C0L5 1744 aa10.18□□□□□ -0.78
CLRN1-206ENST00000485607 IGSF1Q8N6C5 1336 aa10.17□□□□□ -0.78
CLRN1-206ENST00000485607 MOXD2PA6NHM9 499 aa10.17□□□□□ -0.78
CLRN1-206ENST00000485607 WDR4P57081 412 aaKnown RBP10.17□□□□□ -0.78
CLRN1-206ENST00000485607 TTLL12Q14166 644 aaPredicted RBP10.17□□□□□ -0.78
CLRN1-206ENST00000485607 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
CLRN1-206ENST00000485607 LINC00116Q8NCU8 138 aa10.17□□□□□ -0.78
CLRN1-206ENST00000485607 ASAP1Q9ULH1 1129 aa10.17□□□□□ -0.78
CLRN1-206ENST00000485607 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
CLRN1-206ENST00000485607 ERBB4Q15303 1308 aa10.16□□□□□ -0.78
CLRN1-206ENST00000485607 LOC102724428A0A0B4J2F2 783 aa10.16□□□□□ -0.78
CLRN1-206ENST00000485607 SIK1P57059 783 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms