RNA–Protein interactions for RNA: ENST00000484933.6

LINC01140-206, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-206ENST00000484933 DNAI1Q9UI46 699 aa11.89□□□□□ -0.51
LINC01140-206ENST00000484933 CLGNO14967 610 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 ADCK5Q3MIX3 580 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
LINC01140-206ENST00000484933 TTC6Q86TZ1 520 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 PDRG1Q9NUG6 133 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 TAOK2Q9UL54 1235 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 LMTK2Q8IWU2 1503 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 PPFIA3O75145 1194 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 SMC1AQ14683 1233 aaKnown RBP11.88□□□□□ -0.51
LINC01140-206ENST00000484933 SRLQ86TD4 932 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 AK7Q96M32 723 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 NCAPGQ9BPX3 1015 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 ZSWIM4Q9H7M6 989 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 KIF24Q5T7B8 1368 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 LEKR1Q6ZMV7 388 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
LINC01140-206ENST00000484933 YY1AP1Q9H869 796 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 CCDC61Q9Y6R9 512 aa11.88□□□□□ -0.51
LINC01140-206ENST00000484933 NOM1Q5C9Z4 860 aaKnown RBP11.87□□□□□ -0.51
LINC01140-206ENST00000484933 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 FAM53CQ9NYF3 392 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 A0A1B0GUL7 405 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 H2AFXP16104 143 aaPredicted RBP11.87□□□□□ -0.51
LINC01140-206ENST00000484933 FOXR1Q6PIV2 292 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 ERBB3P21860 1342 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 NEXMIFQ5QGS0 1516 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 PHACTR2O75167 634 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 AMPHP49418 695 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 PTH1RQ03431 593 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 PLA2G4DQ86XP0 818 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 CNTROBQ8N137 903 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 TMEM87AQ8NBN3 555 aa11.87□□□□□ -0.51
LINC01140-206ENST00000484933 NEURL4Q96JN8 1562 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 KRT85P78386 507 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 NYAP1Q6ZVC0 841 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 RHPN1Q8TCX5 695 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 SGSM2O43147 1006 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 ATF3P18847 181 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 GUCY2CP25092 1073 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 MCM6Q14566 821 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 CREBRFQ8IUR6 639 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 CARD6Q9BX69 1037 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
LINC01140-206ENST00000484933 MAP2P11137 1827 aaKnown RBP11.86□□□□□ -0.51
LINC01140-206ENST00000484933 SETD1BQ9UPS6 1966 aaKnown RBP11.86□□□□□ -0.51
LINC01140-206ENST00000484933 NR1I2O75469 434 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 SPATA32Q96LK8 384 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 VPS18Q9P253 973 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 SASH3O75995 380 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 IBSPP21815 317 aaPredicted RBP11.85□□□□□ -0.51
LINC01140-206ENST00000484933 SLFNL1Q499Z3 407 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 CDC37L1Q7L3B6 337 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 CABLES1Q8TDN4 633 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 USP44Q9H0E7 712 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC01140-206ENST00000484933 CYP46A1Q9Y6A2 500 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 SPATA31D1Q6ZQQ2 1576 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 CEP170BQ9Y4F5 1589 aaPredicted RBP11.85□□□□□ -0.51
LINC01140-206ENST00000484933 MAP3K19Q56UN5 1328 aa11.85□□□□□ -0.51
LINC01140-206ENST00000484933 COL9A3Q14050 684 aaPredicted RBP11.85□□□□□ -0.51
LINC01140-206ENST00000484933 DNAJC21Q5F1R6 531 aaKnown RBP11.85□□□□□ -0.51
LINC01140-206ENST00000484933 NPHP4O75161 1426 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-206ENST00000484933 SMC2O95347 1197 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 MUM1L1Q5H9M0 696 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 ISM2Q6H9L7 571 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 CCDC9Q9Y3X0 531 aaKnown RBP11.84□□□□□ -0.51
LINC01140-206ENST00000484933 TBX22Q9Y458 520 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 ADAMTSL3P82987 1691 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 TMEM131LA2VDJ0 1609 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 SALL3Q9BXA9 1300 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-206ENST00000484933 ME3Q16798 604 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 RNF20Q5VTR2 975 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 LSG1Q9H089 658 aaKnown RBP11.84□□□□□ -0.51
LINC01140-206ENST00000484933 SOS1Q07889 1333 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-206ENST00000484933 RAB11FIP3O75154 756 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 USHBP1Q8N6Y0 703 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 FBXO18Q8NFZ0 1043 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
LINC01140-206ENST00000484933 PTPRUQ92729 1446 aa11.83□□□□□ -0.52
LINC01140-206ENST00000484933 FAM193AP78312 1265 aa11.83□□□□□ -0.52
LINC01140-206ENST00000484933 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
LINC01140-206ENST00000484933 PA2G4Q9UQ80 394 aaKnown RBP11.83□□□□□ -0.52
LINC01140-206ENST00000484933 TMEM94Q12767 1356 aa11.83□□□□□ -0.52
LINC01140-206ENST00000484933 EVCP57679 992 aa11.83□□□□□ -0.52
LINC01140-206ENST00000484933 PTPN21Q16825 1174 aa11.83□□□□□ -0.52
LINC01140-206ENST00000484933 GOLGA5Q8TBA6 731 aa11.83□□□□□ -0.52
LINC01140-206ENST00000484933 TTC14Q96N46 770 aa11.83□□□□□ -0.52
LINC01140-206ENST00000484933 HYPKQ9NX55 129 aa11.83□□□□□ -0.52
LINC01140-206ENST00000484933 ORC3Q9UBD5 711 aaPredicted RBP11.83□□□□□ -0.52
LINC01140-206ENST00000484933 TAF7Q15545 349 aaPredicted RBP11.82□□□□□ -0.52
LINC01140-206ENST00000484933 EIF3CLB5ME19 914 aaKnown RBP11.82□□□□□ -0.52
LINC01140-206ENST00000484933 ZKSCAN1P17029 563 aaPredicted RBP11.82□□□□□ -0.52
LINC01140-206ENST00000484933 MMP14P50281 582 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms