RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 ABCC4O15439 1325 aa22.88■■□□□ 1.25
CNKSR1-208ENST00000484874 CSF1RP07333 972 aa22.88■■□□□ 1.25
CNKSR1-208ENST00000484874 RTKN2Q8IZC4 609 aa22.88■■□□□ 1.25
CNKSR1-208ENST00000484874 TTLL11Q8NHH1 800 aa22.88■■□□□ 1.25
CNKSR1-208ENST00000484874 CHD4Q14839 1912 aa22.88■■□□□ 1.25
CNKSR1-208ENST00000484874 LAMB2P55268 1798 aa22.87■■□□□ 1.25
CNKSR1-208ENST00000484874 CTSWP56202 376 aa22.87■■□□□ 1.25
CNKSR1-208ENST00000484874 ATF7IPQ6VMQ6 1270 aa22.87■■□□□ 1.25
CNKSR1-208ENST00000484874 LTBP3Q9NS15 1303 aa22.86■■□□□ 1.25
CNKSR1-208ENST00000484874 CCDC93Q567U6 631 aa22.86■■□□□ 1.25
CNKSR1-208ENST00000484874 SP8Q8IXZ3 490 aa22.86■■□□□ 1.25
CNKSR1-208ENST00000484874 ZNF219Q9P2Y4 722 aaPredicted RBP22.86■■□□□ 1.25
CNKSR1-208ENST00000484874 ATP6V0A2Q9Y487 856 aa22.86■■□□□ 1.25
CNKSR1-208ENST00000484874 PPEF1O14829 653 aaPredicted RBP22.85■■□□□ 1.25
CNKSR1-208ENST00000484874 RPS8P62241 208 aaKnown RBP22.85■■□□□ 1.25
CNKSR1-208ENST00000484874 INTS3Q68E01 1043 aaKnown RBP22.85■■□□□ 1.25
CNKSR1-208ENST00000484874 USP44Q9H0E7 712 aa22.85■■□□□ 1.25
CNKSR1-208ENST00000484874 RTL9Q8NET4 1388 aa22.85■■□□□ 1.25
CNKSR1-208ENST00000484874 NFKBIEO00221 500 aa22.84■■□□□ 1.25
CNKSR1-208ENST00000484874 ZKSCAN2Q63HK3 967 aa22.84■■□□□ 1.25
CNKSR1-208ENST00000484874 FRAT1Q92837 279 aaPredicted RBP22.84■■□□□ 1.25
CNKSR1-208ENST00000484874 TMX4Q9H1E5 349 aaPredicted RBP22.84■■□□□ 1.25
CNKSR1-208ENST00000484874 NBPF7P0C2Y1 421 aaPredicted RBP22.83■■□□□ 1.25
CNKSR1-208ENST00000484874 TRIM27P14373 513 aa22.83■■□□□ 1.25
CNKSR1-208ENST00000484874 FOXO4P98177 505 aa22.83■■□□□ 1.25
CNKSR1-208ENST00000484874 LMNB1P20700 586 aa22.82■■□□□ 1.24
CNKSR1-208ENST00000484874 YY1P25490 414 aa22.82■■□□□ 1.24
CNKSR1-208ENST00000484874 CELF1Q92879 486 aaKnown RBP22.82■■□□□ 1.24
CNKSR1-208ENST00000484874 SEC31BQ9NQW1 1179 aa22.82■■□□□ 1.24
CNKSR1-208ENST00000484874 FER1L6Q2WGJ9 1857 aa22.81■■□□□ 1.24
CNKSR1-208ENST00000484874 FKBP4Q02790 459 aaKnown RBP eCLIP22.81■■□□□ 1.24
CNKSR1-208ENST00000484874 CDC5LQ99459 802 aaKnown RBP22.81■■□□□ 1.24
CNKSR1-208ENST00000484874 PSMD1Q99460 953 aa22.81■■□□□ 1.24
CNKSR1-208ENST00000484874 TAOK3Q9H2K8 898 aa22.81■■□□□ 1.24
CNKSR1-208ENST00000484874 RCAN3Q9UKA8 241 aa22.81■■□□□ 1.24
CNKSR1-208ENST00000484874 CACNA1SQ13698 1873 aa22.81■■□□□ 1.24
CNKSR1-208ENST00000484874 OLFM4Q6UX06 510 aa22.8■■□□□ 1.24
CNKSR1-208ENST00000484874 YTHDC1Q96MU7 727 aaKnown RBP22.8■■□□□ 1.24
CNKSR1-208ENST00000484874 GREM2Q9H772 168 aa22.8■■□□□ 1.24
CNKSR1-208ENST00000484874 HDAC5Q9UQL6 1122 aa22.8■■□□□ 1.24
CNKSR1-208ENST00000484874 SNED1Q8TER0 1413 aa22.8■■□□□ 1.24
CNKSR1-208ENST00000484874 MYH3P11055 1940 aa22.79■■□□□ 1.24
CNKSR1-208ENST00000484874 C9orf131Q5VYM1 1079 aa22.79■■□□□ 1.24
CNKSR1-208ENST00000484874 ANKRD18AQ8IVF6 992 aa22.79■■□□□ 1.24
CNKSR1-208ENST00000484874 KAZALD1Q96I82 304 aa22.79■■□□□ 1.24
CNKSR1-208ENST00000484874 SBF1O95248 1867 aa22.78■■□□□ 1.24
CNKSR1-208ENST00000484874 PRELPP51888 382 aa22.78■■□□□ 1.24
CNKSR1-208ENST00000484874 RASSF7Q02833 373 aa22.78■■□□□ 1.24
CNKSR1-208ENST00000484874 EPHA10Q5JZY3 1008 aa22.78■■□□□ 1.24
CNKSR1-208ENST00000484874 LMBR1LQ6UX01 489 aa22.78■■□□□ 1.24
CNKSR1-208ENST00000484874 SUCLG2Q96I99 432 aa22.78■■□□□ 1.24
CNKSR1-208ENST00000484874 CCDC85AQ96PX6 553 aaPredicted RBP22.78■■□□□ 1.24
CNKSR1-208ENST00000484874 RTFDC1Q9BY42 306 aaPredicted RBP22.78■■□□□ 1.24
CNKSR1-208ENST00000484874 VPS33BQ9H267 617 aa22.78■■□□□ 1.24
CNKSR1-208ENST00000484874 TAF1P21675 1872 aa22.77■■□□□ 1.24
CNKSR1-208ENST00000484874 ITGA6P23229 1130 aa22.77■■□□□ 1.24
CNKSR1-208ENST00000484874 BSDC1Q9NW68 430 aaPredicted RBP22.77■■□□□ 1.24
CNKSR1-208ENST00000484874 RABL6Q3YEC7 729 aaPredicted RBP22.76■■□□□ 1.23
CNKSR1-208ENST00000484874 DZIP1LQ8IYY4 767 aaKnown RBP22.76■■□□□ 1.23
CNKSR1-208ENST00000484874 MPNDQ8N594 471 aa22.76■■□□□ 1.23
CNKSR1-208ENST00000484874 RNF181Q9P0P0 153 aa22.76■■□□□ 1.23
CNKSR1-208ENST00000484874 ZC3H4Q9UPT8 1303 aaKnown RBP22.76■■□□□ 1.23
CNKSR1-208ENST00000484874 ANKRD18BA2A2Z9 1011 aa22.75■■□□□ 1.23
CNKSR1-208ENST00000484874 MS4A1P11836 297 aa22.75■■□□□ 1.23
CNKSR1-208ENST00000484874 IFIT5Q13325 482 aaKnown RBP22.75■■□□□ 1.23
CNKSR1-208ENST00000484874 SUPT20HQ8NEM7 779 aa22.75■■□□□ 1.23
CNKSR1-208ENST00000484874 CLUAP1Q96AJ1 413 aa22.75■■□□□ 1.23
CNKSR1-208ENST00000484874 TNNQ9UQP3 1299 aa22.75■■□□□ 1.23
CNKSR1-208ENST00000484874 GNAI3P08754 354 aa22.74■■□□□ 1.23
CNKSR1-208ENST00000484874 UBTFL1P0CB47 393 aaPredicted RBP22.74■■□□□ 1.23
CNKSR1-208ENST00000484874 FAM161AQ3B820 660 aa22.74■■□□□ 1.23
CNKSR1-208ENST00000484874 PODXL2Q9NZ53 605 aa22.74■■□□□ 1.23
CNKSR1-208ENST00000484874 IGHMBP2P38935 993 aaKnown RBP22.73■■□□□ 1.23
CNKSR1-208ENST00000484874 CCDC57Q2TAC2 916 aa22.73■■□□□ 1.23
CNKSR1-208ENST00000484874 DPP8Q6V1X1 898 aaPredicted RBP22.73■■□□□ 1.23
CNKSR1-208ENST00000484874 BICC1Q9H694 974 aaKnown RBP22.73■■□□□ 1.23
CNKSR1-208ENST00000484874 IARSP41252 1262 aaKnown RBP22.72■■□□□ 1.23
CNKSR1-208ENST00000484874 FTSJ3Q8IY81 847 aaKnown RBP22.72■■□□□ 1.23
CNKSR1-208ENST00000484874 TMEM57Q8N5G2 664 aa22.72■■□□□ 1.23
CNKSR1-208ENST00000484874 ANKRD44Q8N8A2 993 aa22.72■■□□□ 1.23
CNKSR1-208ENST00000484874 ZNF277Q9NRM2 450 aaPredicted RBP22.72■■□□□ 1.23
CNKSR1-208ENST00000484874 SLC51AQ86UW1 340 aa22.71■■□□□ 1.23
CNKSR1-208ENST00000484874 MPHOSPH8Q99549 860 aa22.71■■□□□ 1.23
CNKSR1-208ENST00000484874 MEIS3Q99687 375 aa22.71■■□□□ 1.23
CNKSR1-208ENST00000484874 MINPP1Q9UNW1 487 aa22.71■■□□□ 1.23
CNKSR1-208ENST00000484874 NSFL1CQ9UNZ2 370 aaKnown RBP22.71■■□□□ 1.23
CNKSR1-208ENST00000484874 CHMP3Q9Y3E7 222 aa22.71■■□□□ 1.23
CNKSR1-208ENST00000484874 COL4A1P02462 1669 aa22.71■■□□□ 1.23
CNKSR1-208ENST00000484874 CCDC88AQ3V6T2 1871 aa22.71■■□□□ 1.23
CNKSR1-208ENST00000484874 GPSM2P81274 684 aa22.7■■□□□ 1.22
CNKSR1-208ENST00000484874 LRRC37AA6NMS7 1700 aa22.69■■□□□ 1.22
CNKSR1-208ENST00000484874 RLBP1P12271 317 aa22.69■■□□□ 1.22
CNKSR1-208ENST00000484874 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.69■■□□□ 1.22
CNKSR1-208ENST00000484874 DICER1Q9UPY3 1922 aaKnown RBP22.69■■□□□ 1.22
CNKSR1-208ENST00000484874 XDHP47989 1333 aa22.67■■□□□ 1.22
CNKSR1-208ENST00000484874 ZBTB7BO15156 539 aaPredicted RBP22.67■■□□□ 1.22
CNKSR1-208ENST00000484874 KIAA2012Q0VF49 1180 aa22.67■■□□□ 1.22
CNKSR1-208ENST00000484874 ZNF784Q8NCA9 323 aaPredicted RBP22.67■■□□□ 1.22
CNKSR1-208ENST00000484874 TBC1D16Q8TBP0 767 aa22.67■■□□□ 1.22
CNKSR1-208ENST00000484874 ANKRD2Q9GZV1 360 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms