RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 UBE2OQ9C0C9 1292 aaKnown RBP9.67□□□□□ -0.86
CCDC66-219ENST00000484441 DNAJB12Q9NXW2 375 aaKnown RBP9.67□□□□□ -0.86
CCDC66-219ENST00000484441 MTMR7Q9Y216 660 aa9.67□□□□□ -0.86
CCDC66-219ENST00000484441 SASH3O75995 380 aa9.66□□□□□ -0.86
CCDC66-219ENST00000484441 ALBP02768 609 aa9.66□□□□□ -0.86
CCDC66-219ENST00000484441 COL9A3Q14050 684 aaPredicted RBP9.66□□□□□ -0.86
CCDC66-219ENST00000484441 DHX32Q7L7V1 743 aaKnown RBP9.66□□□□□ -0.86
CCDC66-219ENST00000484441 TRPM4Q8TD43 1214 aa9.66□□□□□ -0.86
CCDC66-219ENST00000484441 PIK3R2O00459 728 aa9.65□□□□□ -0.86
CCDC66-219ENST00000484441 RARAP10276 462 aa9.65□□□□□ -0.86
CCDC66-219ENST00000484441 MPSTP25325 297 aa9.65□□□□□ -0.86
CCDC66-219ENST00000484441 GPLD1P80108 840 aa9.65□□□□□ -0.86
CCDC66-219ENST00000484441 SF3B2Q13435 895 aaKnown RBP9.65□□□□□ -0.86
CCDC66-219ENST00000484441 KRT25Q7Z3Z0 450 aa9.65□□□□□ -0.86
CCDC66-219ENST00000484441 MICALL1Q8N3F8 863 aa9.65□□□□□ -0.86
CCDC66-219ENST00000484441 NAGPAQ9UK23 515 aa9.65□□□□□ -0.86
CCDC66-219ENST00000484441 GDF11O95390 407 aa9.64□□□□□ -0.87
CCDC66-219ENST00000484441 COL8A1P27658 744 aa9.64□□□□□ -0.87
CCDC66-219ENST00000484441 SOX18P35713 384 aa9.64□□□□□ -0.87
CCDC66-219ENST00000484441 NRLP54845 237 aa9.64□□□□□ -0.87
CCDC66-219ENST00000484441 PCSK7Q16549 785 aa9.64□□□□□ -0.87
CCDC66-219ENST00000484441 ALYREFQ86V81 257 aaKnown RBP9.64□□□□□ -0.87
CCDC66-219ENST00000484441 GPR152Q8TDT2 470 aa9.64□□□□□ -0.87
CCDC66-219ENST00000484441 TLR7Q9NYK1 1049 aaKnown RBP9.64□□□□□ -0.87
CCDC66-219ENST00000484441 EGFL7Q9UHF1 273 aa9.64□□□□□ -0.87
CCDC66-219ENST00000484441 ZBTB42B2RXF5 422 aa9.63□□□□□ -0.87
CCDC66-219ENST00000484441 M0R082 166 aa9.63□□□□□ -0.87
CCDC66-219ENST00000484441 EIF1AXP47813 144 aaKnown RBP9.63□□□□□ -0.87
CCDC66-219ENST00000484441 MTMR3Q13615 1198 aa9.63□□□□□ -0.87
CCDC66-219ENST00000484441 NOM1Q5C9Z4 860 aaKnown RBP9.63□□□□□ -0.87
CCDC66-219ENST00000484441 NLRP13Q86W25 1043 aa9.63□□□□□ -0.87
CCDC66-219ENST00000484441 ATCAYQ86WG3 371 aa9.63□□□□□ -0.87
CCDC66-219ENST00000484441 TMEM151AQ8N4L1 468 aa9.63□□□□□ -0.87
CCDC66-219ENST00000484441 ZNF417Q8TAU3 575 aa9.63□□□□□ -0.87
CCDC66-219ENST00000484441 TRIM11Q96F44 468 aa9.63□□□□□ -0.87
CCDC66-219ENST00000484441 ZNF587Q96SQ5 575 aaPredicted RBP9.63□□□□□ -0.87
CCDC66-219ENST00000484441 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
CCDC66-219ENST00000484441 UBAP1LF5GYI3 381 aa9.62□□□□□ -0.87
CCDC66-219ENST00000484441 MMP20O60882 483 aa9.62□□□□□ -0.87
CCDC66-219ENST00000484441 ARID4AP29374 1257 aaPredicted RBP9.62□□□□□ -0.87
CCDC66-219ENST00000484441 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
CCDC66-219ENST00000484441 DCAF5Q96JK2 942 aa9.62□□□□□ -0.87
CCDC66-219ENST00000484441 NID1P14543 1247 aa9.61□□□□□ -0.87
CCDC66-219ENST00000484441 FKBP4Q02790 459 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC66-219ENST00000484441 ALKBH2Q6NS38 261 aa9.61□□□□□ -0.87
CCDC66-219ENST00000484441 NUDT16Q96DE0 195 aaKnown RBP9.61□□□□□ -0.87
CCDC66-219ENST00000484441 NOP53Q9NZM5 478 aaKnown RBP9.61□□□□□ -0.87
CCDC66-219ENST00000484441 FRRS1LQ9P0K9 344 aa9.61□□□□□ -0.87
CCDC66-219ENST00000484441 FNDC3AQ9Y2H6 1198 aaKnown RBP9.61□□□□□ -0.87
CCDC66-219ENST00000484441 FAM13AO94988 1023 aa9.6□□□□□ -0.87
CCDC66-219ENST00000484441 PDGFAP04085 211 aa9.6□□□□□ -0.87
CCDC66-219ENST00000484441 MZF1P28698 734 aaPredicted RBP9.6□□□□□ -0.87
CCDC66-219ENST00000484441 TBC1D8BQ0IIM8 1120 aa9.6□□□□□ -0.87
CCDC66-219ENST00000484441 PDE12Q6L8Q7 609 aaKnown RBP9.6□□□□□ -0.87
CCDC66-219ENST00000484441 LPIN3Q9BQK8 851 aa9.6□□□□□ -0.87
CCDC66-219ENST00000484441 RPLP1P05386 114 aaKnown RBP9.59□□□□□ -0.87
CCDC66-219ENST00000484441 ZNF211Q13398 564 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-219ENST00000484441 ECM1Q16610 540 aa9.59□□□□□ -0.87
CCDC66-219ENST00000484441 XKR5Q6UX68 686 aa9.59□□□□□ -0.87
CCDC66-219ENST00000484441 C8orf86Q6ZUL3 223 aa9.59□□□□□ -0.87
CCDC66-219ENST00000484441 ILDR2Q71H61 639 aa9.59□□□□□ -0.87
CCDC66-219ENST00000484441 IGFLR1Q9H665 355 aa9.59□□□□□ -0.87
CCDC66-219ENST00000484441 ICMTO60725 284 aa9.58□□□□□ -0.88
CCDC66-219ENST00000484441 SERPINB4P48594 390 aa9.58□□□□□ -0.88
CCDC66-219ENST00000484441 PLAURQ03405 335 aa9.58□□□□□ -0.88
CCDC66-219ENST00000484441 PSAPL1Q6NUJ1 521 aa9.58□□□□□ -0.88
CCDC66-219ENST00000484441 FAM35AQ86V20 835 aa9.58□□□□□ -0.88
CCDC66-219ENST00000484441 OR13H1Q8NG92 308 aa9.58□□□□□ -0.88
CCDC66-219ENST00000484441 EDEM1Q92611 657 aa9.58□□□□□ -0.88
CCDC66-219ENST00000484441 TTC9Q92623 222 aa9.58□□□□□ -0.88
CCDC66-219ENST00000484441 FZD6O60353 706 aa9.57□□□□□ -0.88
CCDC66-219ENST00000484441 LILRB5O75023 590 aa9.57□□□□□ -0.88
CCDC66-219ENST00000484441 ABL1P00519 1130 aa9.57□□□□□ -0.88
CCDC66-219ENST00000484441 PSAPP07602 524 aa9.57□□□□□ -0.88
CCDC66-219ENST00000484441 PERM1Q5SV97 790 aa9.57□□□□□ -0.88
CCDC66-219ENST00000484441 ITGB2P05107 769 aa9.56□□□□□ -0.88
CCDC66-219ENST00000484441 AFF1P51825 1210 aaKnown RBP9.56□□□□□ -0.88
CCDC66-219ENST00000484441 DNM1Q05193 864 aaKnown RBP9.56□□□□□ -0.88
CCDC66-219ENST00000484441 GRIK5Q16478 980 aa9.56□□□□□ -0.88
CCDC66-219ENST00000484441 PLVAPQ9BX97 442 aa9.56□□□□□ -0.88
CCDC66-219ENST00000484441 JPH1Q9HDC5 661 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-219ENST00000484441 ABI2Q9NYB9 513 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-219ENST00000484441 BRD1O95696 1058 aa9.55□□□□□ -0.88
CCDC66-219ENST00000484441 CPB1P15086 417 aa9.55□□□□□ -0.88
CCDC66-219ENST00000484441 MLLT1Q03111 559 aaPredicted RBP9.55□□□□□ -0.88
CCDC66-219ENST00000484441 GGNBP2Q9H3C7 697 aa9.55□□□□□ -0.88
CCDC66-219ENST00000484441 ELP3Q9H9T3 547 aa9.55□□□□□ -0.88
CCDC66-219ENST00000484441 ANO2Q9NQ90 1003 aa9.55□□□□□ -0.88
CCDC66-219ENST00000484441 GNEQ9Y223 722 aaKnown RBP9.55□□□□□ -0.88
CCDC66-219ENST00000484441 LOC102724428A0A0B4J2F2 783 aa9.54□□□□□ -0.88
CCDC66-219ENST00000484441 KRBA1A5PL33 1030 aa9.54□□□□□ -0.88
CCDC66-219ENST00000484441 KIF4AO95239 1232 aa9.54□□□□□ -0.88
CCDC66-219ENST00000484441 PCSK2P16519 638 aa9.54□□□□□ -0.88
CCDC66-219ENST00000484441 SIK1P57059 783 aa9.54□□□□□ -0.88
CCDC66-219ENST00000484441 NUDT8Q8WV74 236 aa9.54□□□□□ -0.88
CCDC66-219ENST00000484441 TMEM63CQ9P1W3 806 aa9.54□□□□□ -0.88
CCDC66-219ENST00000484441 POLIQ9UNA4 740 aa9.54□□□□□ -0.88
CCDC66-219ENST00000484441 SPDYE3A6NKU9 549 aa9.53□□□□□ -0.88
CCDC66-219ENST00000484441 H3BRB1 525 aa9.53□□□□□ -0.88
CCDC66-219ENST00000484441 RGS9O75916 674 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms