RNA–Protein interactions for RNA: ENST00000484375.5

ARPC1B-218, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-218ENST00000484375 DZIP1LQ8IYY4 767 aaKnown RBP28.44■■■□□ 2.14
ARPC1B-218ENST00000484375 PRPF40BQ6NWY9 871 aaKnown RBP28.43■■■□□ 2.14
ARPC1B-218ENST00000484375 JARID2Q92833 1246 aaPredicted RBP28.43■■■□□ 2.14
ARPC1B-218ENST00000484375 SLX4Q8IY92 1834 aa28.43■■■□□ 2.14
ARPC1B-218ENST00000484375 RTL9Q8NET4 1388 aa28.42■■■□□ 2.14
ARPC1B-218ENST00000484375 CLUAP1Q96AJ1 413 aa28.42■■■□□ 2.14
ARPC1B-218ENST00000484375 TMC4Q7Z404 712 aa28.41■■■□□ 2.14
ARPC1B-218ENST00000484375 WWC3Q9ULE0 1092 aa28.41■■■□□ 2.14
ARPC1B-218ENST00000484375 YBX3P16989 372 aaKnown RBP eCLIP28.4■■■□□ 2.142e-9■■■■□ 22.7
ARPC1B-218ENST00000484375 GRAPQ13588 217 aa28.4■■■□□ 2.14
ARPC1B-218ENST00000484375 GRAPLQ8TC17 118 aaPredicted RBP28.4■■■□□ 2.14
ARPC1B-218ENST00000484375 USP44Q9H0E7 712 aa28.4■■■□□ 2.14
ARPC1B-218ENST00000484375 TMX4Q9H1E5 349 aaPredicted RBP28.4■■■□□ 2.14
ARPC1B-218ENST00000484375 NBPF7P0C2Y1 421 aaPredicted RBP28.39■■■□□ 2.14
ARPC1B-218ENST00000484375 TTLL11Q8NHH1 800 aa28.39■■■□□ 2.14
ARPC1B-218ENST00000484375 BBOX1O75936 387 aa28.38■■■□□ 2.13
ARPC1B-218ENST00000484375 GNAI3P08754 354 aa28.38■■■□□ 2.13
ARPC1B-218ENST00000484375 UBTFL1P0CB47 393 aaPredicted RBP28.38■■■□□ 2.13
ARPC1B-218ENST00000484375 CC2D2BQ6DHV5 1058 aa28.38■■■□□ 2.13
ARPC1B-218ENST00000484375 GRIPAP1Q4V328 841 aa28.37■■■□□ 2.13
ARPC1B-218ENST00000484375 TMEM57Q8N5G2 664 aa28.37■■■□□ 2.13
ARPC1B-218ENST00000484375 CDC5LQ99459 802 aaKnown RBP28.37■■■□□ 2.13
ARPC1B-218ENST00000484375 PPEF1O14829 653 aaPredicted RBP28.36■■■□□ 2.13
ARPC1B-218ENST00000484375 CSF1RP07333 972 aa28.36■■■□□ 2.13
ARPC1B-218ENST00000484375 TNNQ9UQP3 1299 aa28.35■■■□□ 2.13
ARPC1B-218ENST00000484375 TAF1P21675 1872 aa28.34■■■□□ 2.13
ARPC1B-218ENST00000484375 FOXO4P98177 505 aa28.34■■■□□ 2.13
ARPC1B-218ENST00000484375 PDE3AQ14432 1141 aa28.34■■■□□ 2.13
ARPC1B-218ENST00000484375 CCDC93Q567U6 631 aa28.34■■■□□ 2.13
ARPC1B-218ENST00000484375 ITPRIPQ8IWB1 547 aa28.34■■■□□ 2.13
ARPC1B-218ENST00000484375 SUCLG2Q96I99 432 aa28.34■■■□□ 2.13
ARPC1B-218ENST00000484375 LRRC37AA6NMS7 1700 aa28.34■■■□□ 2.13
ARPC1B-218ENST00000484375 FER1L6Q2WGJ9 1857 aa28.34■■■□□ 2.13
ARPC1B-218ENST00000484375 C21orf2O43822 256 aa28.33■■■□□ 2.13
ARPC1B-218ENST00000484375 CHMP4BQ9H444 224 aaKnown RBP28.33■■■□□ 2.13
ARPC1B-218ENST00000484375 CHD4Q14839 1912 aa28.32■■■□□ 2.12
ARPC1B-218ENST00000484375 ANKRD18AQ8IVF6 992 aa28.32■■■□□ 2.12
ARPC1B-218ENST00000484375 C7orf43Q8WVR3 580 aa28.32■■■□□ 2.12
ARPC1B-218ENST00000484375 GREM2Q9H772 168 aa28.32■■■□□ 2.12
ARPC1B-218ENST00000484375 GOLGB1Q14789 3259 aaKnown RBP28.32■■■□□ 2.12
ARPC1B-218ENST00000484375 ANKRD18BA2A2Z9 1011 aa28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 RLBP1P12271 317 aa28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 RPS8P62241 208 aaKnown RBP28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 IFIT5Q13325 482 aaKnown RBP28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 RABL6Q3YEC7 729 aaPredicted RBP28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 LMBR1LQ6UX01 489 aa28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 RTKN2Q8IZC4 609 aa28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 CCDC85AQ96PX6 553 aaPredicted RBP28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 MEIS3Q99687 375 aa28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 CHMP3Q9Y3E7 222 aa28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 ATP6V0A2Q9Y487 856 aa28.31■■■□□ 2.12
ARPC1B-218ENST00000484375 SPEF2Q9C093 1822 aa28.3■■■□□ 2.12
ARPC1B-218ENST00000484375 ITGA6P23229 1130 aa28.3■■■□□ 2.12
ARPC1B-218ENST00000484375 CCDC57Q2TAC2 916 aa28.3■■■□□ 2.12
ARPC1B-218ENST00000484375 FAM161AQ3B820 660 aa28.3■■■□□ 2.12
ARPC1B-218ENST00000484375 ARHGAP27Q6ZUM4 889 aa28.3■■■□□ 2.12
ARPC1B-218ENST00000484375 SP8Q8IXZ3 490 aa28.3■■■□□ 2.12
ARPC1B-218ENST00000484375 BICC1Q9H694 974 aaKnown RBP28.3■■■□□ 2.12
ARPC1B-218ENST00000484375 PLIN1O60240 522 aa28.29■■■□□ 2.12
ARPC1B-218ENST00000484375 IGHMBP2P38935 993 aaKnown RBP28.29■■■□□ 2.12
ARPC1B-218ENST00000484375 PANK1Q8TE04 598 aa28.29■■■□□ 2.12
ARPC1B-218ENST00000484375 CELF1Q92879 486 aaKnown RBP28.29■■■□□ 2.12
ARPC1B-218ENST00000484375 KAZALD1Q96I82 304 aa28.29■■■□□ 2.12
ARPC1B-218ENST00000484375 SEC31BQ9NQW1 1179 aa28.29■■■□□ 2.12
ARPC1B-218ENST00000484375 ZNF219Q9P2Y4 722 aaPredicted RBP28.29■■■□□ 2.12
ARPC1B-218ENST00000484375 DDX19BQ9UMR2 479 aa28.29■■■□□ 2.12
ARPC1B-218ENST00000484375 RRP1P56182 461 aaKnown RBP28.28■■■□□ 2.12
ARPC1B-218ENST00000484375 MVPQ14764 893 aaKnown RBP28.28■■■□□ 2.12
ARPC1B-218ENST00000484375 EPHA10Q5JZY3 1008 aa28.28■■■□□ 2.12
ARPC1B-218ENST00000484375 LTBP3Q9NS15 1303 aa28.27■■■□□ 2.12
ARPC1B-218ENST00000484375 GNAI2P04899 355 aa28.27■■■□□ 2.12
ARPC1B-218ENST00000484375 TAF7LQ5H9L4 462 aa28.26■■■□□ 2.11
ARPC1B-218ENST00000484375 TAOK3Q9H2K8 898 aa28.26■■■□□ 2.11
ARPC1B-218ENST00000484375 ANKRD44Q8N8A2 993 aa28.25■■■□□ 2.11
ARPC1B-218ENST00000484375 MPHOSPH8Q99549 860 aa28.25■■■□□ 2.11
ARPC1B-218ENST00000484375 BSDC1Q9NW68 430 aaPredicted RBP28.25■■■□□ 2.11
ARPC1B-218ENST00000484375 LRRFIP2Q9Y608 721 aaKnown RBP28.25■■■□□ 2.11
ARPC1B-218ENST00000484375 SNED1Q8TER0 1413 aa28.24■■■□□ 2.11
ARPC1B-218ENST00000484375 SBF1O95248 1867 aa28.23■■■□□ 2.11
ARPC1B-218ENST00000484375 COL4A1P02462 1669 aa28.23■■■□□ 2.11
ARPC1B-218ENST00000484375 ZBTB7BO15156 539 aaPredicted RBP28.23■■■□□ 2.11
ARPC1B-218ENST00000484375 FKBP4Q02790 459 aaKnown RBP eCLIP28.23■■■□□ 2.11
ARPC1B-218ENST00000484375 PSMD1Q99460 953 aa28.23■■■□□ 2.11
ARPC1B-218ENST00000484375 SUPT20HQ8NEM7 779 aa28.22■■■□□ 2.11
ARPC1B-218ENST00000484375 COG6Q9Y2V7 657 aa28.22■■■□□ 2.11
ARPC1B-218ENST00000484375 NFKBIEO00221 500 aa28.21■■■□□ 2.11
ARPC1B-218ENST00000484375 DICER1Q9UPY3 1922 aaKnown RBP28.2■■■□□ 2.11
ARPC1B-218ENST00000484375 DPP8Q6V1X1 898 aaPredicted RBP28.2■■■□□ 2.1
ARPC1B-218ENST00000484375 MPNDQ8N594 471 aa28.2■■■□□ 2.1
ARPC1B-218ENST00000484375 CCDC88AQ3V6T2 1871 aa28.2■■■□□ 2.1
ARPC1B-218ENST00000484375 LTBP1Q14766 1721 aa28.2■■■□□ 2.1
ARPC1B-218ENST00000484375 LMNB1P20700 586 aa28.19■■■□□ 2.1
ARPC1B-218ENST00000484375 MTX1Q13505 466 aa28.19■■■□□ 2.1
ARPC1B-218ENST00000484375 OLFM4Q6UX06 510 aa28.18■■■□□ 2.1
ARPC1B-218ENST00000484375 VPS33BQ9H267 617 aa28.18■■■□□ 2.1
ARPC1B-218ENST00000484375 RASSF7Q02833 373 aa28.17■■■□□ 2.1
ARPC1B-218ENST00000484375 LDHAL6AQ6ZMR3 332 aa28.17■■■□□ 2.1
ARPC1B-218ENST00000484375 RTFDC1Q9BY42 306 aaPredicted RBP28.17■■■□□ 2.1
ARPC1B-218ENST00000484375 ANKRD2Q9GZV1 360 aa28.17■■■□□ 2.1
ARPC1B-218ENST00000484375 PODXL2Q9NZ53 605 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms