RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 HSP90B1P14625 803 aaKnown RBP8.08□□□□□ -1.12
NCL-209ENST00000484328 CTSWP56202 376 aa8.08□□□□□ -1.12
NCL-209ENST00000484328 AAMPQ13685 434 aa8.08□□□□□ -1.12
NCL-209ENST00000484328 SF3B3Q15393 1217 aaKnown RBP8.08□□□□□ -1.12
NCL-209ENST00000484328 EPHA10Q5JZY3 1008 aa8.08□□□□□ -1.12
NCL-209ENST00000484328 C3orf67Q6ZVT6 689 aa8.08□□□□□ -1.12
NCL-209ENST00000484328 ANKRD44Q8N8A2 993 aa8.08□□□□□ -1.12
NCL-209ENST00000484328 CHMP4BQ9H444 224 aaKnown RBP8.08□□□□□ -1.12
NCL-209ENST00000484328 ARAP2Q8WZ64 1704 aa8.07□□□□□ -1.12
NCL-209ENST00000484328 DUOX1Q9NRD9 1551 aa8.07□□□□□ -1.12
NCL-209ENST00000484328 SNED1Q8TER0 1413 aa8.07□□□□□ -1.12
NCL-209ENST00000484328 GNAI2P04899 355 aa8.07□□□□□ -1.12
NCL-209ENST00000484328 HCLS1P14317 486 aaPredicted RBP8.07□□□□□ -1.12
NCL-209ENST00000484328 RTL5Q5HYW3 569 aaPredicted RBP8.07□□□□□ -1.12
NCL-209ENST00000484328 JARID2Q92833 1246 aaPredicted RBP8.07□□□□□ -1.12
NCL-209ENST00000484328 BICC1Q9H694 974 aaKnown RBP8.07□□□□□ -1.12
NCL-209ENST00000484328 PDZRN3Q9UPQ7 1066 aa8.07□□□□□ -1.12
NCL-209ENST00000484328 HDAC5Q9UQL6 1122 aa8.07□□□□□ -1.12
NCL-209ENST00000484328 CD2APQ9Y5K6 639 aa8.07□□□□□ -1.12
NCL-209ENST00000484328 LRRFIP2Q9Y608 721 aaKnown RBP8.07□□□□□ -1.12
NCL-209ENST00000484328 SLX4Q8IY92 1834 aa8.06□□□□□ -1.12
NCL-209ENST00000484328 SRGNP10124 158 aa8.06□□□□□ -1.12
NCL-209ENST00000484328 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
NCL-209ENST00000484328 HOXA10P31260 410 aaPredicted RBP8.06□□□□□ -1.12
NCL-209ENST00000484328 PDE6BP35913 854 aa8.06□□□□□ -1.12
NCL-209ENST00000484328 CEP85Q6P2H3 762 aa8.06□□□□□ -1.12
NCL-209ENST00000484328 CCDC24Q8N4L8 307 aa8.06□□□□□ -1.12
NCL-209ENST00000484328 TTLL11Q8NHH1 800 aa8.06□□□□□ -1.12
NCL-209ENST00000484328 EXOC6Q8TAG9 804 aa8.06□□□□□ -1.12
NCL-209ENST00000484328 FER1L6Q2WGJ9 1857 aa8.06□□□□□ -1.12
NCL-209ENST00000484328 NPHP1O15259 732 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 NPR1P16066 1061 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 RFX5P48382 616 aaPredicted RBP8.05□□□□□ -1.12
NCL-209ENST00000484328 TGFB2P61812 414 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 POLA2Q14181 598 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 FAM161AQ3B820 660 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 CCDC152Q4G0S7 254 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 STYK1Q6J9G0 422 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 LMBR1LQ6UX01 489 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 NLRP3Q96P20 1036 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 GREM2Q9H772 168 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 C1orf115Q9H7X2 142 aa8.05□□□□□ -1.12
NCL-209ENST00000484328 PNMA6EA0A0J9YXQ4 647 aa8.04□□□□□ -1.12
NCL-209ENST00000484328 KCNA3P22001 575 aa8.04□□□□□ -1.12
NCL-209ENST00000484328 CHRNA5P30532 468 aa8.04□□□□□ -1.12
NCL-209ENST00000484328 IRX6P78412 446 aaPredicted RBP8.04□□□□□ -1.12
NCL-209ENST00000484328 C2CD5Q86YS7 1000 aa8.04□□□□□ -1.12
NCL-209ENST00000484328 SIRT2Q8IXJ6 389 aa8.04□□□□□ -1.12
NCL-209ENST00000484328 RPAP2Q8IXW5 612 aaPredicted RBP8.04□□□□□ -1.12
NCL-209ENST00000484328 SSH3Q8TE77 659 aa8.04□□□□□ -1.12
NCL-209ENST00000484328 CRAMP1Q96RY5 1269 aa8.04□□□□□ -1.12
NCL-209ENST00000484328 FHDC1Q9C0D6 1143 aaPredicted RBP8.04□□□□□ -1.12
NCL-209ENST00000484328 H0YIN7 160 aa8.03□□□□□ -1.12
NCL-209ENST00000484328 DPEP1P16444 411 aa8.03□□□□□ -1.12
NCL-209ENST00000484328 ITGA6P23229 1130 aa8.03□□□□□ -1.12
NCL-209ENST00000484328 ATP8B2P98198 1209 aa8.03□□□□□ -1.12
NCL-209ENST00000484328 GRAPQ13588 217 aa8.03□□□□□ -1.12
NCL-209ENST00000484328 NLGN2Q8NFZ4 835 aa8.03□□□□□ -1.12
NCL-209ENST00000484328 GRAPLQ8TC17 118 aaPredicted RBP8.03□□□□□ -1.12
NCL-209ENST00000484328 RPGRQ92834 1020 aaKnown RBP8.03□□□□□ -1.12
NCL-209ENST00000484328 MASTLQ96GX5 879 aa8.03□□□□□ -1.12
NCL-209ENST00000484328 SEC31BQ9NQW1 1179 aa8.03□□□□□ -1.12
NCL-209ENST00000484328 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
NCL-209ENST00000484328 ZNF646O15015 1829 aaPredicted RBP8.02□□□□□ -1.13
NCL-209ENST00000484328 ANKRD18BA2A2Z9 1011 aa8.02□□□□□ -1.13
NCL-209ENST00000484328 SRGAP3O43295 1099 aa8.02□□□□□ -1.13
NCL-209ENST00000484328 NEFLP07196 543 aa8.02□□□□□ -1.13
NCL-209ENST00000484328 PTPN12Q05209 780 aaKnown RBP8.02□□□□□ -1.13
NCL-209ENST00000484328 IFIT5Q13325 482 aaKnown RBP8.02□□□□□ -1.13
NCL-209ENST00000484328 HDAC1Q13547 482 aaPredicted RBP8.02□□□□□ -1.13
NCL-209ENST00000484328 ERICH6BQ5W0A0 696 aa8.02□□□□□ -1.13
NCL-209ENST00000484328 DDX46Q7L014 1031 aaKnown RBP8.02□□□□□ -1.13
NCL-209ENST00000484328 TMC4Q7Z404 712 aa8.02□□□□□ -1.13
NCL-209ENST00000484328 CELF1Q92879 486 aaKnown RBP8.02□□□□□ -1.13
NCL-209ENST00000484328 RBM17Q96I25 401 aaKnown RBP8.02□□□□□ -1.13
NCL-209ENST00000484328 CDC5LQ99459 802 aaKnown RBP8.02□□□□□ -1.13
NCL-209ENST00000484328 SYT17Q9BSW7 474 aa8.02□□□□□ -1.13
NCL-209ENST00000484328 COPRSQ9NQ92 184 aa8.02□□□□□ -1.13
NCL-209ENST00000484328 FBXO3Q9UK99 471 aa8.02□□□□□ -1.13
NCL-209ENST00000484328 SRCAPQ6ZRS2 3230 aa8.01□□□□□ -1.13
NCL-209ENST00000484328 A0A0G2JLW4 131 aa8.01□□□□□ -1.13
NCL-209ENST00000484328 CIAO1O76071 339 aa8.01□□□□□ -1.13
NCL-209ENST00000484328 ALDH1B1P30837 517 aa8.01□□□□□ -1.13
NCL-209ENST00000484328 CCDC57Q2TAC2 916 aa8.01□□□□□ -1.13
NCL-209ENST00000484328 PRPF40BQ6NWY9 871 aaKnown RBP8.01□□□□□ -1.13
NCL-209ENST00000484328 C7orf43Q8WVR3 580 aa8.01□□□□□ -1.13
NCL-209ENST00000484328 CNKSR1Q969H4 720 aa8.01□□□□□ -1.13
NCL-209ENST00000484328 CCDC85AQ96PX6 553 aaPredicted RBP8.01□□□□□ -1.13
NCL-209ENST00000484328 BSDC1Q9NW68 430 aaPredicted RBP8.01□□□□□ -1.13
NCL-209ENST00000484328 PPP1R1BQ9UD71 204 aaPredicted RBP8.01□□□□□ -1.13
NCL-209ENST00000484328 NOP58Q9Y2X3 529 aaKnown RBP8.01□□□□□ -1.13
NCL-209ENST00000484328 PSME4Q14997 1843 aa8.01□□□□□ -1.13
NCL-209ENST00000484328 TIAM2Q8IVF5 1701 aa8□□□□□ -1.13
NCL-209ENST00000484328 EYA2O00167 538 aa8□□□□□ -1.13
NCL-209ENST00000484328 PPEF1O14829 653 aaPredicted RBP8□□□□□ -1.13
NCL-209ENST00000484328 HMMRO75330 724 aa8□□□□□ -1.13
NCL-209ENST00000484328 BBOX1O75936 387 aa8□□□□□ -1.13
NCL-209ENST00000484328 RPS8P62241 208 aaKnown RBP8□□□□□ -1.13
NCL-209ENST00000484328 ATG9AQ7Z3C6 839 aa8□□□□□ -1.13
NCL-209ENST00000484328 SLC51AQ86UW1 340 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms