RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 GNAI1P63096 354 aa8.82□□□□□ -1
BRCA1-216ENST00000484087 ERFEQ4G0M1 354 aa8.82□□□□□ -1
BRCA1-216ENST00000484087 DALRD3Q5D0E6 543 aaKnown RBP8.82□□□□□ -1
BRCA1-216ENST00000484087 EXOC6Q8TAG9 804 aa8.82□□□□□ -1
BRCA1-216ENST00000484087 FANCIQ9NVI1 1328 aa8.82□□□□□ -1
BRCA1-216ENST00000484087 BABAM1Q9NWV8 329 aa8.82□□□□□ -1
BRCA1-216ENST00000484087 ZNF652Q9Y2D9 606 aa8.82□□□□□ -1
BRCA1-216ENST00000484087 ERBB4Q15303 1308 aa8.81□□□□□ -1
BRCA1-216ENST00000484087 ATP5J2-PTCD1G3V325 749 aa8.81□□□□□ -1
BRCA1-216ENST00000484087 GRIN3BO60391 1043 aa8.81□□□□□ -1
BRCA1-216ENST00000484087 MS4A1P11836 297 aa8.81□□□□□ -1
BRCA1-216ENST00000484087 ST5P78524 1137 aa8.81□□□□□ -1
BRCA1-216ENST00000484087 RTL5Q5HYW3 569 aaPredicted RBP8.81□□□□□ -1
BRCA1-216ENST00000484087 IER5LQ5T953 404 aa8.81□□□□□ -1
BRCA1-216ENST00000484087 CRBNQ96SW2 442 aa8.81□□□□□ -1
BRCA1-216ENST00000484087 DDX21Q9NR30 783 aaKnown RBP eCLIP8.81□□□□□ -1
BRCA1-216ENST00000484087 H0YIN7 160 aa8.8□□□□□ -1
BRCA1-216ENST00000484087 C21orf2O43822 256 aa8.8□□□□□ -1
BRCA1-216ENST00000484087 SEC24BO95487 1268 aa8.8□□□□□ -1
BRCA1-216ENST00000484087 NTSR2O95665 410 aa8.8□□□□□ -1
BRCA1-216ENST00000484087 PDE3AQ14432 1141 aa8.8□□□□□ -1
BRCA1-216ENST00000484087 CLEC4GQ6UXB4 293 aa8.8□□□□□ -1
BRCA1-216ENST00000484087 GIGYF2Q6Y7W6 1299 aaKnown RBP8.8□□□□□ -1
BRCA1-216ENST00000484087 ZNF34Q8IZ26 560 aa8.8□□□□□ -1
BRCA1-216ENST00000484087 JARID2Q92833 1246 aaPredicted RBP8.8□□□□□ -1
BRCA1-216ENST00000484087 CIZ1Q9ULV3 898 aaPredicted RBP8.8□□□□□ -1
BRCA1-216ENST00000484087 SPEF2Q9C093 1822 aa8.8□□□□□ -1
BRCA1-216ENST00000484087 ERVV-1B6SEH8 477 aa8.79□□□□□ -1
BRCA1-216ENST00000484087 BCAR3O75815 825 aa8.79□□□□□ -1
BRCA1-216ENST00000484087 SRGNP10124 158 aa8.79□□□□□ -1
BRCA1-216ENST00000484087 GTF2E1P29083 439 aaPredicted RBP8.79□□□□□ -1
BRCA1-216ENST00000484087 RARSP54136 660 aaKnown RBP8.79□□□□□ -1
BRCA1-216ENST00000484087 MMRN1Q13201 1228 aa8.79□□□□□ -1
BRCA1-216ENST00000484087 PRPF40BQ6NWY9 871 aaKnown RBP8.79□□□□□ -1
BRCA1-216ENST00000484087 G2E3Q7L622 706 aa8.79□□□□□ -1
BRCA1-216ENST00000484087 BRIP1Q9BX63 1249 aa8.79□□□□□ -1
BRCA1-216ENST00000484087 NFKBIEO00221 500 aa8.78□□□□□ -1
BRCA1-216ENST00000484087 HCLS1P14317 486 aaPredicted RBP8.78□□□□□ -1
BRCA1-216ENST00000484087 PDE6BP35913 854 aa8.78□□□□□ -1
BRCA1-216ENST00000484087 EXOSC9Q06265 439 aaKnown RBP8.78□□□□□ -1
BRCA1-216ENST00000484087 AAMPQ13685 434 aa8.78□□□□□ -1
BRCA1-216ENST00000484087 TWISTNBQ3B726 338 aaPredicted RBP8.78□□□□□ -1
BRCA1-216ENST00000484087 C9orf131Q5VYM1 1079 aa8.78□□□□□ -1
BRCA1-216ENST00000484087 TTLL6Q8N841 843 aa8.78□□□□□ -1
BRCA1-216ENST00000484087 FRAT1Q92837 279 aaPredicted RBP8.78□□□□□ -1
BRCA1-216ENST00000484087 RNF181Q9P0P0 153 aa8.78□□□□□ -1
BRCA1-216ENST00000484087 DBF4Q9UBU7 674 aaPredicted RBP8.78□□□□□ -1
BRCA1-216ENST00000484087 PCDHB13Q9Y5F0 798 aa8.78□□□□□ -1
BRCA1-216ENST00000484087 DICER1Q9UPY3 1922 aaKnown RBP8.78□□□□□ -1
BRCA1-216ENST00000484087 HOXB7P09629 217 aa8.77□□□□□ -1
BRCA1-216ENST00000484087 TPTE2Q6XPS3 522 aa8.77□□□□□ -1
BRCA1-216ENST00000484087 NLRP10Q86W26 655 aa8.77□□□□□ -1
BRCA1-216ENST00000484087 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1
BRCA1-216ENST00000484087 COL4A5P29400 1685 aa8.77□□□□□ -1.01
BRCA1-216ENST00000484087 IPO8O15397 1037 aaKnown RBP8.77□□□□□ -1.01
BRCA1-216ENST00000484087 ST18O60284 1047 aa8.77□□□□□ -1.01
BRCA1-216ENST00000484087 NUBP1P53384 320 aa8.77□□□□□ -1.01
BRCA1-216ENST00000484087 C20orf194Q5TEA3 1177 aa8.77□□□□□ -1.01
BRCA1-216ENST00000484087 ZKSCAN2Q63HK3 967 aa8.77□□□□□ -1.01
BRCA1-216ENST00000484087 MYD88Q99836 296 aa8.77□□□□□ -1.01
BRCA1-216ENST00000484087 SMC4Q9NTJ3 1288 aa8.77□□□□□ -1.01
BRCA1-216ENST00000484087 KIF16BQ96L93 1317 aa8.76□□□□□ -1.01
BRCA1-216ENST00000484087 CEP350Q5VT06 3117 aa8.76□□□□□ -1.01
BRCA1-216ENST00000484087 TCIRG1Q13488 830 aa8.76□□□□□ -1.01
BRCA1-216ENST00000484087 ALDH1L2Q3SY69 923 aa8.76□□□□□ -1.01
BRCA1-216ENST00000484087 ANKRD13DQ6ZTN6 518 aa8.76□□□□□ -1.01
BRCA1-216ENST00000484087 RIC3Q7Z5B4 369 aa8.76□□□□□ -1.01
BRCA1-216ENST00000484087 FTSJ3Q8IY81 847 aaKnown RBP8.76□□□□□ -1.01
BRCA1-216ENST00000484087 PLBD2Q8NHP8 589 aa8.76□□□□□ -1.01
BRCA1-216ENST00000484087 FAM89AQ96GI7 184 aa8.76□□□□□ -1.01
BRCA1-216ENST00000484087 MASTLQ96GX5 879 aa8.76□□□□□ -1.01
BRCA1-216ENST00000484087 TRMT112Q9UI30 125 aaKnown RBP8.76□□□□□ -1.01
BRCA1-216ENST00000484087 IBTKQ9P2D0 1353 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-216ENST00000484087 MYH3P11055 1940 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 NPR1P16066 1061 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 CWF19L2Q2TBE0 894 aaKnown RBP8.75□□□□□ -1.01
BRCA1-216ENST00000484087 STYK1Q6J9G0 422 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 SPNS2Q8IVW8 549 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 CCDC85AQ96PX6 553 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-216ENST00000484087 ISCA1Q9BUE6 129 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 UTP14AQ9BVJ6 771 aaKnown RBP8.75□□□□□ -1.01
BRCA1-216ENST00000484087 NYXQ9GZU5 481 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 NMRK2Q9NPI5 230 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 HYPKQ9NX55 129 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 MAP3K2Q9Y2U5 619 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 RIC1Q4ADV7 1423 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 SNED1Q8TER0 1413 aa8.75□□□□□ -1.01
BRCA1-216ENST00000484087 ABCC4O15439 1325 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 LRRC37AA6NMS7 1700 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 DUOX1Q9NRD9 1551 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 KLRG2A4D1S0 409 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-216ENST00000484087 VAMP4O75379 141 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 CRY2Q49AN0 593 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 PARP10Q53GL7 1025 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 CCDC30Q5VVM6 783 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 CENPQQ7L2Z9 268 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-216ENST00000484087 PPP1R42Q7Z4L9 355 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 RPGRQ92834 1020 aaKnown RBP8.74□□□□□ -1.01
BRCA1-216ENST00000484087 BCL2L13Q9BXK5 485 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 GPBP1L1Q9HC44 474 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms