RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 ZFYVE16Q7Z3T8 1539 aa9.67□□□□□ -0.86
RIF1-210ENST00000484077 MAPTP10636 758 aaKnown RBP9.67□□□□□ -0.86
RIF1-210ENST00000484077 SCG3Q8WXD2 468 aaKnown RBP9.67□□□□□ -0.86
RIF1-210ENST00000484077 KLRG1Q96E93 195 aa9.67□□□□□ -0.86
RIF1-210ENST00000484077 SYCP2Q9BX26 1530 aa9.66□□□□□ -0.86
RIF1-210ENST00000484077 EFSO43281 561 aa9.66□□□□□ -0.86
RIF1-210ENST00000484077 OIP5O43482 229 aa9.66□□□□□ -0.86
RIF1-210ENST00000484077 FOXO3O43524 673 aa9.66□□□□□ -0.86
RIF1-210ENST00000484077 SWI5Q1ZZU3 235 aa9.66□□□□□ -0.86
RIF1-210ENST00000484077 PHACTR1Q9C0D0 580 aa9.66□□□□□ -0.86
RIF1-210ENST00000484077 NOVA2Q9UNW9 492 aaKnown RBP9.66□□□□□ -0.86
RIF1-210ENST00000484077 ZNF518AQ6AHZ1 1483 aa9.66□□□□□ -0.86
RIF1-210ENST00000484077 ATG7O95352 703 aa9.65□□□□□ -0.86
RIF1-210ENST00000484077 RAPGEF3O95398 923 aa9.65□□□□□ -0.86
RIF1-210ENST00000484077 ARAFP10398 606 aa9.65□□□□□ -0.86
RIF1-210ENST00000484077 SRPK2P78362 688 aaKnown RBP9.65□□□□□ -0.86
RIF1-210ENST00000484077 SH3PXD2AQ5TCZ1 1133 aa9.65□□□□□ -0.86
RIF1-210ENST00000484077 LRRC9Q6ZRR7 1453 aa9.65□□□□□ -0.87
RIF1-210ENST00000484077 SIGLEC1Q9BZZ2 1709 aa9.65□□□□□ -0.87
RIF1-210ENST00000484077 ABCA6Q8N139 1617 aa9.64□□□□□ -0.87
RIF1-210ENST00000484077 KHNYNO15037 678 aaKnown RBP9.64□□□□□ -0.87
RIF1-210ENST00000484077 WEE1P30291 646 aa9.64□□□□□ -0.87
RIF1-210ENST00000484077 CTBSQ01459 385 aa9.64□□□□□ -0.87
RIF1-210ENST00000484077 KCNMA1Q12791 1236 aa9.64□□□□□ -0.87
RIF1-210ENST00000484077 ALDH16A1Q8IZ83 802 aa9.64□□□□□ -0.87
RIF1-210ENST00000484077 SCARF2Q96GP6 870 aaPredicted RBP9.64□□□□□ -0.87
RIF1-210ENST00000484077 MARK1Q9P0L2 795 aa9.64□□□□□ -0.87
RIF1-210ENST00000484077 HCN4Q9Y3Q4 1203 aa9.64□□□□□ -0.87
RIF1-210ENST00000484077 GPATCH8Q9UKJ3 1502 aaKnown RBP9.64□□□□□ -0.87
RIF1-210ENST00000484077 NCOA2Q15596 1464 aa9.64□□□□□ -0.87
RIF1-210ENST00000484077 INO80Q9ULG1 1556 aaPredicted RBP9.63□□□□□ -0.87
RIF1-210ENST00000484077 DIP2CQ9Y2E4 1556 aa9.63□□□□□ -0.87
RIF1-210ENST00000484077 ACIN1Q9UKV3 1341 aaKnown RBP9.63□□□□□ -0.87
RIF1-210ENST00000484077 BCORL1Q5H9F3 1711 aa9.63□□□□□ -0.87
RIF1-210ENST00000484077 DCDC2BA2VCK2 349 aa9.63□□□□□ -0.87
RIF1-210ENST00000484077 C2CD2LO14523 706 aa9.63□□□□□ -0.87
RIF1-210ENST00000484077 MARSP56192 900 aaKnown RBP9.63□□□□□ -0.87
RIF1-210ENST00000484077 LRRC69Q6ZNQ3 347 aa9.63□□□□□ -0.87
RIF1-210ENST00000484077 SLCO4C1Q6ZQN7 724 aa9.63□□□□□ -0.87
RIF1-210ENST00000484077 PBXIP1Q96AQ6 731 aa9.63□□□□□ -0.87
RIF1-210ENST00000484077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.63□□□□□ -0.87
RIF1-210ENST00000484077 SCAPERQ9BY12 1400 aa9.63□□□□□ -0.87
RIF1-210ENST00000484077 MAGI2Q86UL8 1455 aa9.62□□□□□ -0.87
RIF1-210ENST00000484077 RTN1Q16799 776 aa9.62□□□□□ -0.87
RIF1-210ENST00000484077 IER5Q5VY09 327 aa9.62□□□□□ -0.87
RIF1-210ENST00000484077 CCNB3Q8WWL7 1395 aa9.62□□□□□ -0.87
RIF1-210ENST00000484077 PLEKHH2Q8IVE3 1493 aa9.61□□□□□ -0.87
RIF1-210ENST00000484077 KIDINS220Q9ULH0 1771 aa9.61□□□□□ -0.87
RIF1-210ENST00000484077 C14orf37Q86TY3 774 aa9.61□□□□□ -0.87
RIF1-210ENST00000484077 NEDD1Q8NHV4 660 aa9.61□□□□□ -0.87
RIF1-210ENST00000484077 ARHGEF12Q9NZN5 1544 aa9.61□□□□□ -0.87
RIF1-210ENST00000484077 MADDQ8WXG6 1647 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 CAMSAP2Q08AD1 1489 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 REREQ9P2R6 1566 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 YEATS2Q9ULM3 1422 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 KCNQ4P56696 695 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 CDCA8Q53HL2 280 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 EFCAB2Q5VUJ9 269 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 SUSD3Q96L08 255 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 CROCC2H7BZ55 1655 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 ADAMTSL3P82987 1691 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 FER1L4A9Z1Z3 1794 aa9.6□□□□□ -0.87
RIF1-210ENST00000484077 ADGBQ8N7X0 1667 aa9.59□□□□□ -0.87
RIF1-210ENST00000484077 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.59□□□□□ -0.87
RIF1-210ENST00000484077 ADH6P28332 368 aa9.59□□□□□ -0.87
RIF1-210ENST00000484077 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
RIF1-210ENST00000484077 GALNT6Q8NCL4 622 aa9.59□□□□□ -0.87
RIF1-210ENST00000484077 EDARADDQ8WWZ3 215 aa9.59□□□□□ -0.87
RIF1-210ENST00000484077 VTI1AQ96AJ9 217 aa9.59□□□□□ -0.87
RIF1-210ENST00000484077 ZMIZ1Q9ULJ6 1067 aa9.59□□□□□ -0.87
RIF1-210ENST00000484077 ATP7AQ04656 1500 aa9.59□□□□□ -0.87
RIF1-210ENST00000484077 RIMS1Q86UR5 1692 aaKnown RBP9.58□□□□□ -0.88
RIF1-210ENST00000484077 C9orf84Q5VXU9 1444 aa9.58□□□□□ -0.88
RIF1-210ENST00000484077 PHF20L1A8MW92 1017 aa9.58□□□□□ -0.88
RIF1-210ENST00000484077 CD33P20138 364 aa9.58□□□□□ -0.88
RIF1-210ENST00000484077 ZNF468Q5VIY5 522 aaPredicted RBP9.58□□□□□ -0.88
RIF1-210ENST00000484077 PODNQ7Z5L7 613 aa9.58□□□□□ -0.88
RIF1-210ENST00000484077 BEND7Q8N7W2 519 aaPredicted RBP9.58□□□□□ -0.88
RIF1-210ENST00000484077 MYO19Q96H55 970 aa9.58□□□□□ -0.88
RIF1-210ENST00000484077 EFCC1Q9HA90 598 aa9.58□□□□□ -0.88
RIF1-210ENST00000484077 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
RIF1-210ENST00000484077 HCN2Q9UL51 889 aa9.58□□□□□ -0.88
RIF1-210ENST00000484077 ARHGEF5Q12774 1597 aa9.58□□□□□ -0.88
RIF1-210ENST00000484077 TRAPPC8Q9Y2L5 1435 aa9.57□□□□□ -0.88
RIF1-210ENST00000484077 TYRO3Q06418 890 aa9.57□□□□□ -0.88
RIF1-210ENST00000484077 BRD7Q9NPI1 651 aa9.57□□□□□ -0.88
RIF1-210ENST00000484077 PRR12Q9ULL5 1215 aa9.57□□□□□ -0.88
RIF1-210ENST00000484077 DNMT3AQ9Y6K1 912 aaPredicted RBP9.57□□□□□ -0.88
RIF1-210ENST00000484077 MLH3Q9UHC1 1453 aa9.57□□□□□ -0.88
RIF1-210ENST00000484077 PLXNC1O60486 1568 aa9.56□□□□□ -0.88
RIF1-210ENST00000484077 TGFBR3LH3BV60 316 aa9.56□□□□□ -0.88
RIF1-210ENST00000484077 PPP1R15AO75807 674 aaPredicted RBP9.56□□□□□ -0.88
RIF1-210ENST00000484077 EPXP11678 715 aa9.56□□□□□ -0.88
RIF1-210ENST00000484077 NEUROD1Q13562 356 aa9.56□□□□□ -0.88
RIF1-210ENST00000484077 NGLY1Q96IV0 654 aa9.56□□□□□ -0.88
RIF1-210ENST00000484077 CEP63Q96MT8 703 aa9.56□□□□□ -0.88
RIF1-210ENST00000484077 PTPN23Q9H3S7 1636 aa9.56□□□□□ -0.88
RIF1-210ENST00000484077 MYOM3Q5VTT5 1437 aa9.56□□□□□ -0.88
RIF1-210ENST00000484077 KIAA1107Q9UPP5 1409 aa9.56□□□□□ -0.88
RIF1-210ENST00000484077 CCDC141Q6ZP82 1450 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms