RNA–Protein interactions for RNA: ENST00000483904.5

NCOA1-208, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 3

Gene NCOA1, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-208ENST00000483904 OPLAHO14841 1288 aa7.46□□□□□ -1.22
NCOA1-208ENST00000483904 ZIC2O95409 532 aaPredicted RBP7.46□□□□□ -1.22
NCOA1-208ENST00000483904 TEAD4Q15561 434 aa7.46□□□□□ -1.22
NCOA1-208ENST00000483904 TBCELQ5QJ74 424 aa7.46□□□□□ -1.22
NCOA1-208ENST00000483904 TTC16Q8NEE8 873 aa7.46□□□□□ -1.22
NCOA1-208ENST00000483904 AGBL1Q96MI9 1066 aa7.46□□□□□ -1.22
NCOA1-208ENST00000483904 FAM8A1Q9UBU6 413 aa7.46□□□□□ -1.22
NCOA1-208ENST00000483904 USP3Q9Y6I4 520 aa7.46□□□□□ -1.22
NCOA1-208ENST00000483904 TIMP2P16035 220 aa7.45□□□□□ -1.22
NCOA1-208ENST00000483904 CERS3Q8IU89 383 aa7.45□□□□□ -1.22
NCOA1-208ENST00000483904 SLC16A10Q8TF71 515 aa7.45□□□□□ -1.22
NCOA1-208ENST00000483904 IFT43Q96FT9 208 aa7.45□□□□□ -1.22
NCOA1-208ENST00000483904 WDR4P57081 412 aaKnown RBP7.44□□□□□ -1.22
NCOA1-208ENST00000483904 DGKZQ13574 1117 aa7.44□□□□□ -1.22
NCOA1-208ENST00000483904 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.44□□□□□ -1.22
NCOA1-208ENST00000483904 ALDH16A1Q8IZ83 802 aa7.44□□□□□ -1.22
NCOA1-208ENST00000483904 CNKSR1Q969H4 720 aa7.44□□□□□ -1.22
NCOA1-208ENST00000483904 SIRPGQ9P1W8 387 aa7.44□□□□□ -1.22
NCOA1-208ENST00000483904 PPME1Q9Y570 386 aa7.44□□□□□ -1.22
NCOA1-208ENST00000483904 PTGIRP43119 386 aa7.43□□□□□ -1.22
NCOA1-208ENST00000483904 PLEKHG4Q58EX7 1191 aa7.43□□□□□ -1.22
NCOA1-208ENST00000483904 HPS1Q92902 700 aa7.43□□□□□ -1.22
NCOA1-208ENST00000483904 NUDT16Q96DE0 195 aaKnown RBP7.43□□□□□ -1.22
NCOA1-208ENST00000483904 ESYT1Q9BSJ8 1104 aa7.43□□□□□ -1.22
NCOA1-208ENST00000483904 OSBPL7Q9BZF2 842 aa7.43□□□□□ -1.22
NCOA1-208ENST00000483904 STRIP2Q9ULQ0 834 aa7.43□□□□□ -1.22
NCOA1-208ENST00000483904 PRKAB1Q9Y478 270 aa7.43□□□□□ -1.22
NCOA1-208ENST00000483904 COL4A3BPQ9Y5P4 624 aa7.43□□□□□ -1.22
NCOA1-208ENST00000483904 SSBP05455 408 aaKnown RBP eCLIP7.42□□□□□ -1.22
NCOA1-208ENST00000483904 CLN3Q13286 438 aa7.42□□□□□ -1.22
NCOA1-208ENST00000483904 TLR1Q15399 786 aa7.42□□□□□ -1.22
NCOA1-208ENST00000483904 LRP10Q7Z4F1 713 aa7.42□□□□□ -1.22
NCOA1-208ENST00000483904 ZSCAN1Q8NBB4 408 aa7.42□□□□□ -1.22
NCOA1-208ENST00000483904 NGLY1Q96IV0 654 aa7.42□□□□□ -1.22
NCOA1-208ENST00000483904 NOC4LQ9BVI4 516 aaKnown RBP7.42□□□□□ -1.22
NCOA1-208ENST00000483904 FHDC1Q9C0D6 1143 aaPredicted RBP7.42□□□□□ -1.22
NCOA1-208ENST00000483904 DNAJC6O75061 913 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
NCOA1-208ENST00000483904 NOS2P35228 1153 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 RELBQ01201 579 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 CENPCQ03188 943 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 MEI1Q5TIA1 1274 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 C1orf53Q5VUE5 145 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 TREML1Q86YW5 311 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 ZNF295-AS1Q8N0V1 137 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 GPR152Q8TDT2 470 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 CCDC74AQ96AQ1 378 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 GGNBP2Q9H3C7 697 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
NCOA1-208ENST00000483904 PCDH12Q9NPG4 1184 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 KLHL42Q9P2K6 505 aa7.41□□□□□ -1.22
NCOA1-208ENST00000483904 NXF1Q9UBU9 619 aaKnown RBP7.41□□□□□ -1.22
NCOA1-208ENST00000483904 PLEKHD1A6NEE1 506 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 USP17L7P0C7H9 530 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 PWP1Q13610 501 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 C8orf34Q49A92 452 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 KIAA0825Q8IV33 1275 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 NPAS3Q8IXF0 933 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 DHX37Q8IY37 1157 aaKnown RBP7.4□□□□□ -1.22
NCOA1-208ENST00000483904 ZDHHC1Q8WTX9 485 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 RNPC3Q96LT9 517 aaKnown RBP7.4□□□□□ -1.22
NCOA1-208ENST00000483904 RSRP1Q9BUV0 290 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 ZNF408Q9H9D4 720 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 SPC25Q9HBM1 224 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 IFT57Q9NWB7 429 aa7.4□□□□□ -1.22
NCOA1-208ENST00000483904 MEN1O00255 615 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 GMPRP36959 345 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 COL9A2Q14055 689 aaPredicted RBP7.39□□□□□ -1.23
NCOA1-208ENST00000483904 HIF1AQ16665 826 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 SH3PXD2AQ5TCZ1 1133 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 FILIP1Q7Z7B0 1213 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 MEIOBQ8N635 442 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 SNX29Q8TEQ0 813 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 SPON2Q9BUD6 331 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 KLK14Q9P0G3 267 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 ZNF232Q9UNY5 417 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 SUGT1Q9Y2Z0 365 aa7.39□□□□□ -1.23
NCOA1-208ENST00000483904 PPP1R12AO14974 1030 aaPredicted RBP7.38□□□□□ -1.23
NCOA1-208ENST00000483904 U2SURPO15042 1029 aaKnown RBP7.38□□□□□ -1.23
NCOA1-208ENST00000483904 IRF7Q92985 503 aa7.38□□□□□ -1.23
NCOA1-208ENST00000483904 L3MBTL2Q969R5 705 aa7.38□□□□□ -1.23
NCOA1-208ENST00000483904 SRPK1Q96SB4 655 aaKnown RBP7.38□□□□□ -1.23
NCOA1-208ENST00000483904 TNFRSF21O75509 655 aa7.37□□□□□ -1.23
NCOA1-208ENST00000483904 EPS8L3Q8TE67 593 aaKnown RBP7.37□□□□□ -1.23
NCOA1-208ENST00000483904 NLRP3Q96P20 1036 aa7.37□□□□□ -1.23
NCOA1-208ENST00000483904 TRIM55Q9BYV6 548 aa7.37□□□□□ -1.23
NCOA1-208ENST00000483904 SLKQ9H2G2 1235 aaPredicted RBP7.37□□□□□ -1.23
NCOA1-208ENST00000483904 COPRSQ9NQ92 184 aa7.37□□□□□ -1.23
NCOA1-208ENST00000483904 CABP1Q9NZU7 370 aa7.37□□□□□ -1.23
NCOA1-208ENST00000483904 HCN4Q9Y3Q4 1203 aa7.37□□□□□ -1.23
NCOA1-208ENST00000483904 KLF4O43474 513 aa7.36□□□□□ -1.23
NCOA1-208ENST00000483904 PARNO95453 639 aaKnown RBP7.36□□□□□ -1.23
NCOA1-208ENST00000483904 NASPP49321 788 aaPredicted RBP7.36□□□□□ -1.23
NCOA1-208ENST00000483904 RAB33AQ14088 237 aa7.36□□□□□ -1.23
NCOA1-208ENST00000483904 HSP90AB2PQ58FF8 381 aa7.36□□□□□ -1.23
NCOA1-208ENST00000483904 PDE12Q6L8Q7 609 aaKnown RBP7.36□□□□□ -1.23
NCOA1-208ENST00000483904 PI16Q6UXB8 463 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms