RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SUPT20HQ8NEM7 779 aa14.46□□□□□ -0.09
SMARCC1-205ENST00000483847 ZC3H15Q8WU90 426 aaKnown RBP14.46□□□□□ -0.09
SMARCC1-205ENST00000483847 NLRP3Q96P20 1036 aa14.46□□□□□ -0.09
SMARCC1-205ENST00000483847 CDHR2Q9BYE9 1310 aa14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 YDJCA8MPS7 323 aa14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 FAM155AB1AL88 458 aaPredicted RBP14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 TAF1P21675 1872 aa14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 PPP2R1AP30153 589 aa14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 KIAA2012Q0VF49 1180 aa14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 SLC10A5Q5PT55 438 aa14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 DPP8Q6V1X1 898 aaPredicted RBP14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 THUMPD2Q9BTF0 503 aaKnown RBP14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 TMX4Q9H1E5 349 aaPredicted RBP14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 DUOX1Q9NRD9 1551 aa14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 CNOT7Q9UIV1 285 aaKnown RBP14.45□□□□□ -0.1
SMARCC1-205ENST00000483847 PPP1R42Q7Z4L9 355 aa14.44□□□□□ -0.1
SMARCC1-205ENST00000483847 SP8Q8IXZ3 490 aa14.44□□□□□ -0.1
SMARCC1-205ENST00000483847 MPNDQ8N594 471 aa14.44□□□□□ -0.1
SMARCC1-205ENST00000483847 ANKRD36CQ5JPF3 1778 aa14.43□□□□□ -0.1
SMARCC1-205ENST00000483847 EGFRP00533 1210 aa14.43□□□□□ -0.1
SMARCC1-205ENST00000483847 TNIP1Q15025 636 aa14.43□□□□□ -0.1
SMARCC1-205ENST00000483847 PARP10Q53GL7 1025 aa14.43□□□□□ -0.1
SMARCC1-205ENST00000483847 SAMD7Q7Z3H4 446 aa14.43□□□□□ -0.1
SMARCC1-205ENST00000483847 LRP10Q7Z4F1 713 aa14.43□□□□□ -0.1
SMARCC1-205ENST00000483847 MICALL2Q8IY33 904 aa14.43□□□□□ -0.1
SMARCC1-205ENST00000483847 UTP14AQ9BVJ6 771 aaKnown RBP14.43□□□□□ -0.1
SMARCC1-205ENST00000483847 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
SMARCC1-205ENST00000483847 BBOX1O75936 387 aa14.42□□□□□ -0.1
SMARCC1-205ENST00000483847 HCLS1P14317 486 aaPredicted RBP14.42□□□□□ -0.1
SMARCC1-205ENST00000483847 KIF23Q02241 960 aaPredicted RBP14.42□□□□□ -0.1
SMARCC1-205ENST00000483847 CCER1Q8TC90 406 aaPredicted RBP14.42□□□□□ -0.1
SMARCC1-205ENST00000483847 PNISRQ8TF01 805 aaKnown RBP14.42□□□□□ -0.1
SMARCC1-205ENST00000483847 POLR2AP24928 1970 aaKnown RBP14.42□□□□□ -0.1
SMARCC1-205ENST00000483847 ADM5C9JUS6 153 aa14.41□□□□□ -0.1
SMARCC1-205ENST00000483847 H7C1D1 291 aa14.41□□□□□ -0.1
SMARCC1-205ENST00000483847 ANXA1P04083 346 aa14.41□□□□□ -0.1
SMARCC1-205ENST00000483847 PDIA6Q15084 440 aa14.41□□□□□ -0.1
SMARCC1-205ENST00000483847 PROSER3Q2NL68 480 aa14.41□□□□□ -0.1
SMARCC1-205ENST00000483847 TBC1D10BQ4KMP7 808 aaPredicted RBP14.41□□□□□ -0.1
SMARCC1-205ENST00000483847 RGMBQ6NW40 437 aa14.41□□□□□ -0.1
SMARCC1-205ENST00000483847 LRRC37AA6NMS7 1700 aa14.41□□□□□ -0.1
SMARCC1-205ENST00000483847 TRPA1O75762 1119 aa14.4□□□□□ -0.1
SMARCC1-205ENST00000483847 KRT26Q7Z3Y9 468 aa14.4□□□□□ -0.1
SMARCC1-205ENST00000483847 ZNF428Q96B54 188 aa14.4□□□□□ -0.1
SMARCC1-205ENST00000483847 GBA2Q9HCG7 927 aaPredicted RBP14.4□□□□□ -0.1
SMARCC1-205ENST00000483847 RNF186Q9NXI6 227 aa14.4□□□□□ -0.1
SMARCC1-205ENST00000483847 SAGE1Q9NXZ1 904 aa14.4□□□□□ -0.1
SMARCC1-205ENST00000483847 ERBB4Q15303 1308 aa14.4□□□□□ -0.1
SMARCC1-205ENST00000483847 PSMD14O00487 310 aa14.39□□□□□ -0.11
SMARCC1-205ENST00000483847 NLRP10Q86W26 655 aa14.39□□□□□ -0.11
SMARCC1-205ENST00000483847 COL4A1P02462 1669 aa14.39□□□□□ -0.11
SMARCC1-205ENST00000483847 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 GRAPQ13588 217 aa14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 RBM26Q5T8P6 1007 aaKnown RBP14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 DDX46Q7L014 1031 aaKnown RBP14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 C2orf69Q8N8R5 385 aa14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 GRAPLQ8TC17 118 aaPredicted RBP14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 DPF2Q92785 391 aa14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 CCDC102AQ96A19 550 aa14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 DBNDD1Q9H9R9 158 aa14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 KCNQ5Q9NR82 932 aa14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 AKAP11Q9UKA4 1901 aa14.38□□□□□ -0.11
SMARCC1-205ENST00000483847 EIF2S2P20042 333 aaKnown RBP14.37□□□□□ -0.11
SMARCC1-205ENST00000483847 NFE2L2Q16236 605 aa14.37□□□□□ -0.11
SMARCC1-205ENST00000483847 CSRNP1Q96S65 589 aa14.37□□□□□ -0.11
SMARCC1-205ENST00000483847 PLEKHF1Q96S99 279 aa14.37□□□□□ -0.11
SMARCC1-205ENST00000483847 ASTN2O75129 1339 aaPredicted RBP14.37□□□□□ -0.11
SMARCC1-205ENST00000483847 RTL9Q8NET4 1388 aa14.36□□□□□ -0.11
SMARCC1-205ENST00000483847 DDX60Q8IY21 1712 aaKnown RBP14.36□□□□□ -0.11
SMARCC1-205ENST00000483847 RIMBP2O15034 1052 aa14.36□□□□□ -0.11
SMARCC1-205ENST00000483847 SLC10A3P09131 477 aa14.36□□□□□ -0.11
SMARCC1-205ENST00000483847 WASHC4Q2M389 1173 aa14.36□□□□□ -0.11
SMARCC1-205ENST00000483847 PRPF38BQ5VTL8 546 aaKnown RBP14.36□□□□□ -0.11
SMARCC1-205ENST00000483847 DCPSQ96C86 337 aaKnown RBP14.36□□□□□ -0.11
SMARCC1-205ENST00000483847 TRMT112Q9UI30 125 aaKnown RBP14.36□□□□□ -0.11
SMARCC1-205ENST00000483847 AIMP1Q12904 312 aaKnown RBP14.35□□□□□ -0.11
SMARCC1-205ENST00000483847 COPS6Q7L5N1 327 aa14.35□□□□□ -0.11
SMARCC1-205ENST00000483847 CTU1Q7Z7A3 348 aaKnown RBP14.35□□□□□ -0.11
SMARCC1-205ENST00000483847 NECTIN2Q92692 538 aa14.35□□□□□ -0.11
SMARCC1-205ENST00000483847 NSFL1CQ9UNZ2 370 aaKnown RBP14.35□□□□□ -0.11
SMARCC1-205ENST00000483847 SH3TC1Q8TE82 1336 aa14.35□□□□□ -0.11
SMARCC1-205ENST00000483847 DOK7Q18PE1 504 aa14.34□□□□□ -0.11
SMARCC1-205ENST00000483847 XAGE3Q8WTP9 111 aa14.34□□□□□ -0.11
SMARCC1-205ENST00000483847 CELF1Q92879 486 aaKnown RBP14.34□□□□□ -0.11
SMARCC1-205ENST00000483847 GGA3Q9NZ52 723 aa14.34□□□□□ -0.11
SMARCC1-205ENST00000483847 POLLQ9UGP5 575 aa14.34□□□□□ -0.11
SMARCC1-205ENST00000483847 TSPYL4Q9UJ04 414 aa14.34□□□□□ -0.11
SMARCC1-205ENST00000483847 SCN9AQ15858 1988 aa14.34□□□□□ -0.11
SMARCC1-205ENST00000483847 ECE2O60344 883 aa14.33□□□□□ -0.12
SMARCC1-205ENST00000483847 NEFMP07197 916 aa14.33□□□□□ -0.12
SMARCC1-205ENST00000483847 GPSM2P81274 684 aa14.33□□□□□ -0.12
SMARCC1-205ENST00000483847 TCIRG1Q13488 830 aa14.33□□□□□ -0.12
SMARCC1-205ENST00000483847 KIF4BQ2VIQ3 1234 aa14.33□□□□□ -0.12
SMARCC1-205ENST00000483847 HSP90AB3PQ58FF7 597 aa14.33□□□□□ -0.12
SMARCC1-205ENST00000483847 TMC4Q7Z404 712 aa14.33□□□□□ -0.12
SMARCC1-205ENST00000483847 CDCA5Q96FF9 252 aa14.33□□□□□ -0.12
SMARCC1-205ENST00000483847 HPS5Q9UPZ3 1129 aa14.33□□□□□ -0.12
SMARCC1-205ENST00000483847 C6orf229H3BNL8 230 aa14.32□□□□□ -0.12
SMARCC1-205ENST00000483847 RPS12P25398 132 aaKnown RBP14.32□□□□□ -0.12
SMARCC1-205ENST00000483847 RASAL3Q86YV0 1011 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 296.1 ms