RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CERKQ8TCT0 537 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 ZNF594Q96JF6 807 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-225ENST00000483495 HAUS7Q99871 368 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 USP21Q9UK80 565 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 THSD7AQ9UPZ6 1657 aa16.03■□□□□ 0.16
CPNE1-225ENST00000483495 UBN2Q6ZU65 1347 aa16.02■□□□□ 0.16
CPNE1-225ENST00000483495 A0A0G2JS52 829 aa16.02■□□□□ 0.16
CPNE1-225ENST00000483495 HSP90AA1P07900 732 aaKnown RBP16.01■□□□□ 0.15
CPNE1-225ENST00000483495 IFIT5Q13325 482 aaKnown RBP16.01■□□□□ 0.15
CPNE1-225ENST00000483495 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
CPNE1-225ENST00000483495 TTLL11Q8NHH1 800 aa16.01■□□□□ 0.15
CPNE1-225ENST00000483495 KCNB2Q92953 911 aa16.01■□□□□ 0.15
CPNE1-225ENST00000483495 AK7Q96M32 723 aa16.01■□□□□ 0.15
CPNE1-225ENST00000483495 FSD1Q9BTV5 496 aa16.01■□□□□ 0.15
CPNE1-225ENST00000483495 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
CPNE1-225ENST00000483495 IRS4O14654 1257 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-225ENST00000483495 CAMTA2O94983 1202 aa16.01■□□□□ 0.15
CPNE1-225ENST00000483495 NEK4P51957 841 aa16.01■□□□□ 0.15
CPNE1-225ENST00000483495 CTSWP56202 376 aa16.01■□□□□ 0.15
CPNE1-225ENST00000483495 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
CPNE1-225ENST00000483495 TRMT112Q9UI30 125 aaKnown RBP16.01■□□□□ 0.15
CPNE1-225ENST00000483495 PDE8AO60658 829 aa16■□□□□ 0.15
CPNE1-225ENST00000483495 NMIQ13287 307 aaPredicted RBP16■□□□□ 0.15
CPNE1-225ENST00000483495 CEP126Q9P2H0 1117 aa16■□□□□ 0.15
CPNE1-225ENST00000483495 COL5A3P25940 1745 aaPredicted RBP16■□□□□ 0.15
CPNE1-225ENST00000483495 MED23Q9ULK4 1368 aa16■□□□□ 0.15
CPNE1-225ENST00000483495 FAM227BQ96M60 508 aa15.99■□□□□ 0.15
CPNE1-225ENST00000483495 SNX14Q9Y5W7 946 aa15.99■□□□□ 0.15
CPNE1-225ENST00000483495 MYH14Q7Z406 1995 aaKnown RBP15.99■□□□□ 0.15
CPNE1-225ENST00000483495 TIMM10P62072 90 aa15.99■□□□□ 0.15
CPNE1-225ENST00000483495 PTH1RQ03431 593 aa15.99■□□□□ 0.15
CPNE1-225ENST00000483495 RAB3GAP1Q15042 981 aa15.99■□□□□ 0.15
CPNE1-225ENST00000483495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.99■□□□□ 0.15
CPNE1-225ENST00000483495 AKAP2Q9Y2D5 859 aa15.99■□□□□ 0.15
CPNE1-225ENST00000483495 CCDC171Q6TFL3 1326 aa15.99■□□□□ 0.15
CPNE1-225ENST00000483495 A0A0D9SFI3 127 aa15.98■□□□□ 0.15
CPNE1-225ENST00000483495 A0A1B0GUL7 405 aa15.98■□□□□ 0.15
CPNE1-225ENST00000483495 PARP10Q53GL7 1025 aa15.98■□□□□ 0.15
CPNE1-225ENST00000483495 MAP4K1Q92918 833 aa15.98■□□□□ 0.15
CPNE1-225ENST00000483495 NEUROD6Q96NK8 337 aa15.98■□□□□ 0.15
CPNE1-225ENST00000483495 GREM2Q9H772 168 aa15.98■□□□□ 0.15
CPNE1-225ENST00000483495 RIPOR2Q9Y4F9 1068 aa15.98■□□□□ 0.15
CPNE1-225ENST00000483495 ITGA6P23229 1130 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 NECTIN1Q15223 517 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 EDC3Q96F86 508 aaKnown RBP15.97■□□□□ 0.15
CPNE1-225ENST00000483495 CWC22Q9HCG8 908 aaKnown RBP15.97■□□□□ 0.15
CPNE1-225ENST00000483495 ANKRD18BA2A2Z9 1011 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 RGL2O15211 777 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 TAF7LQ5H9L4 462 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 KBTBD3Q8NAB2 608 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 LINC00116Q8NCU8 138 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 SH3TC1Q8TE82 1336 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 RIC1Q4ADV7 1423 aa15.97■□□□□ 0.15
CPNE1-225ENST00000483495 CUL4AQ13619 759 aa15.96■□□□□ 0.15
CPNE1-225ENST00000483495 TMX3Q96JJ7 454 aa15.96■□□□□ 0.15
CPNE1-225ENST00000483495 CCDC85AQ96PX6 553 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-225ENST00000483495 UTP14AQ9BVJ6 771 aaKnown RBP15.96■□□□□ 0.15
CPNE1-225ENST00000483495 FOXD4L1Q9NU39 408 aa15.96■□□□□ 0.15
CPNE1-225ENST00000483495 LRP5O75197 1615 aa15.96■□□□□ 0.15
CPNE1-225ENST00000483495 MYH3P11055 1940 aa15.96■□□□□ 0.15
CPNE1-225ENST00000483495 MCM4P33991 863 aa15.95■□□□□ 0.14
CPNE1-225ENST00000483495 CLEC4GQ6UXB4 293 aa15.95■□□□□ 0.14
CPNE1-225ENST00000483495 GJD4Q96KN9 370 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-225ENST00000483495 DNAJC2Q99543 621 aaKnown RBP15.95■□□□□ 0.14
CPNE1-225ENST00000483495 TM6SF1Q9BZW5 370 aa15.95■□□□□ 0.14
CPNE1-225ENST00000483495 NHSQ6T4R5 1651 aa15.95■□□□□ 0.14
CPNE1-225ENST00000483495 ONECUT3O60422 494 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-225ENST00000483495 HSPA1LP34931 641 aa15.95■□□□□ 0.14
CPNE1-225ENST00000483495 TNPO1Q92973 898 aaKnown RBP15.95■□□□□ 0.14
CPNE1-225ENST00000483495 TTC14Q96N46 770 aa15.95■□□□□ 0.14
CPNE1-225ENST00000483495 UPF3BQ9BZI7 483 aaKnown RBP15.95■□□□□ 0.14
CPNE1-225ENST00000483495 PAG1Q9NWQ8 432 aa15.95■□□□□ 0.14
CPNE1-225ENST00000483495 SPEF2Q9C093 1822 aa15.94■□□□□ 0.14
CPNE1-225ENST00000483495 ATRNO75882 1429 aa15.94■□□□□ 0.14
CPNE1-225ENST00000483495 ABCC12Q96J65 1359 aa15.94■□□□□ 0.14
CPNE1-225ENST00000483495 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
CPNE1-225ENST00000483495 LDHAL6AQ6ZMR3 332 aa15.94■□□□□ 0.14
CPNE1-225ENST00000483495 VGLL2Q8N8G2 317 aa15.94■□□□□ 0.14
CPNE1-225ENST00000483495 ZNF652Q9Y2D9 606 aa15.94■□□□□ 0.14
CPNE1-225ENST00000483495 RBM8AQ9Y5S9 174 aaKnown RBP15.94■□□□□ 0.14
CPNE1-225ENST00000483495 NDUFB9Q9Y6M9 179 aa15.94■□□□□ 0.14
CPNE1-225ENST00000483495 BCORQ6W2J9 1755 aa15.94■□□□□ 0.14
CPNE1-225ENST00000483495 NTSR2O95665 410 aa15.93■□□□□ 0.14
CPNE1-225ENST00000483495 HSP90B1P14625 803 aaKnown RBP15.93■□□□□ 0.14
CPNE1-225ENST00000483495 PRPF40BQ6NWY9 871 aaKnown RBP15.93■□□□□ 0.14
CPNE1-225ENST00000483495 CLEC17AQ6ZS10 378 aa15.93■□□□□ 0.14
CPNE1-225ENST00000483495 DDX46Q7L014 1031 aaKnown RBP15.93■□□□□ 0.14
CPNE1-225ENST00000483495 PTF1AQ7RTS3 328 aa15.93■□□□□ 0.14
CPNE1-225ENST00000483495 ZNF589Q86UQ0 364 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-225ENST00000483495 XAGE2Q96GT9 111 aa15.93■□□□□ 0.14
CPNE1-225ENST00000483495 INTS4Q96HW7 963 aaKnown RBP15.93■□□□□ 0.14
CPNE1-225ENST00000483495 RTL9Q8NET4 1388 aa15.93■□□□□ 0.14
CPNE1-225ENST00000483495 TAF5LO75529 589 aa15.93■□□□□ 0.14
CPNE1-225ENST00000483495 CYP2E1P05181 493 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-225ENST00000483495 IFIT1P09914 478 aaKnown RBP15.93■□□□□ 0.14
CPNE1-225ENST00000483495 METTL24Q5JXM2 366 aa15.93■□□□□ 0.14
CPNE1-225ENST00000483495 CCDC158Q5M9N0 1113 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms