RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 BCS1LQ9Y276 419 aa6.27□□□□□ -1.41
LRCH3-217ENST00000483442 MAFBQ9Y5Q3 323 aaPredicted RBP6.27□□□□□ -1.41
LRCH3-217ENST00000483442 GLI2P10070 1586 aa6.27□□□□□ -1.41
LRCH3-217ENST00000483442 PPRC1Q5VV67 1664 aaKnown RBP6.26□□□□□ -1.41
LRCH3-217ENST00000483442 ARID4BQ4LE39 1312 aaPredicted RBP6.26□□□□□ -1.41
LRCH3-217ENST00000483442 TOP2BQ02880 1626 aa6.26□□□□□ -1.41
LRCH3-217ENST00000483442 RASA1P20936 1047 aa6.26□□□□□ -1.41
LRCH3-217ENST00000483442 GATA4P43694 442 aa6.26□□□□□ -1.41
LRCH3-217ENST00000483442 GRIK4Q16099 956 aa6.26□□□□□ -1.41
LRCH3-217ENST00000483442 BHMTQ93088 406 aa6.26□□□□□ -1.41
LRCH3-217ENST00000483442 TEX14Q8IWB6 1497 aa6.26□□□□□ -1.41
LRCH3-217ENST00000483442 CARMIL2Q6F5E8 1435 aa6.25□□□□□ -1.41
LRCH3-217ENST00000483442 UACAQ9BZF9 1416 aa6.25□□□□□ -1.41
LRCH3-217ENST00000483442 EPRSP07814 1512 aaKnown RBP6.25□□□□□ -1.41
LRCH3-217ENST00000483442 RUSC2Q8N2Y8 1516 aa6.25□□□□□ -1.41
LRCH3-217ENST00000483442 RSPO4Q2I0M5 234 aaPredicted RBP6.25□□□□□ -1.41
LRCH3-217ENST00000483442 CRTC2Q53ET0 693 aaPredicted RBP6.25□□□□□ -1.41
LRCH3-217ENST00000483442 KANK4Q5T7N3 995 aaPredicted RBP6.25□□□□□ -1.41
LRCH3-217ENST00000483442 BTLAQ7Z6A9 289 aa6.25□□□□□ -1.41
LRCH3-217ENST00000483442 PRDM6Q9NQX0 595 aa6.25□□□□□ -1.41
LRCH3-217ENST00000483442 ANKIB1Q9P2G1 1089 aa6.25□□□□□ -1.41
LRCH3-217ENST00000483442 FOXD4L6Q3SYB3 417 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-217ENST00000483442 NKAPLQ5M9Q1 402 aa6.24□□□□□ -1.41
LRCH3-217ENST00000483442 FOXD4L3Q6VB84 417 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-217ENST00000483442 PROSER2Q86WR7 435 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-217ENST00000483442 STAG2Q8N3U4 1231 aa6.24□□□□□ -1.41
LRCH3-217ENST00000483442 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
LRCH3-217ENST00000483442 DMGDHQ9UI17 866 aaKnown RBP6.24□□□□□ -1.41
LRCH3-217ENST00000483442 CD109Q6YHK3 1445 aa6.24□□□□□ -1.41
LRCH3-217ENST00000483442 PTPRMP28827 1452 aa6.23□□□□□ -1.41
LRCH3-217ENST00000483442 SEC13P55735 322 aa6.23□□□□□ -1.41
LRCH3-217ENST00000483442 TBC1D8BQ0IIM8 1120 aa6.23□□□□□ -1.41
LRCH3-217ENST00000483442 DPYDQ12882 1025 aa6.23□□□□□ -1.41
LRCH3-217ENST00000483442 PTK7Q13308 1070 aa6.23□□□□□ -1.41
LRCH3-217ENST00000483442 GSX2Q9BZM3 304 aa6.23□□□□□ -1.41
LRCH3-217ENST00000483442 IGFLR1Q9H665 355 aa6.23□□□□□ -1.41
LRCH3-217ENST00000483442 CHMP3Q9Y3E7 222 aa6.23□□□□□ -1.41
LRCH3-217ENST00000483442 RAPGEF3O95398 923 aa6.22□□□□□ -1.41
LRCH3-217ENST00000483442 HINFPQ9BQA5 517 aa6.22□□□□□ -1.41
LRCH3-217ENST00000483442 PPP1R12CQ9BZL4 782 aa6.22□□□□□ -1.41
LRCH3-217ENST00000483442 NAGPAQ9UK23 515 aa6.22□□□□□ -1.41
LRCH3-217ENST00000483442 SLC6A14Q9UN76 642 aa6.22□□□□□ -1.41
LRCH3-217ENST00000483442 UHRF1BP1LA0JNW5 1464 aa6.22□□□□□ -1.41
LRCH3-217ENST00000483442 CARMIL1Q5VZK9 1371 aa6.21□□□□□ -1.41
LRCH3-217ENST00000483442 TRIM28Q13263 835 aaKnown RBP6.21□□□□□ -1.42
LRCH3-217ENST00000483442 PRRT3Q5FWE3 981 aa6.21□□□□□ -1.42
LRCH3-217ENST00000483442 NUDT8Q8WV74 236 aa6.21□□□□□ -1.42
LRCH3-217ENST00000483442 UBE2OQ9C0C9 1292 aaKnown RBP6.21□□□□□ -1.42
LRCH3-217ENST00000483442 KLK14Q9P0G3 267 aa6.21□□□□□ -1.42
LRCH3-217ENST00000483442 MAP3K4Q9Y6R4 1608 aa6.21□□□□□ -1.42
LRCH3-217ENST00000483442 CUL7Q14999 1698 aa6.2□□□□□ -1.42
LRCH3-217ENST00000483442 ARID3CA6NKF2 412 aa6.2□□□□□ -1.42
LRCH3-217ENST00000483442 SELPP16109 830 aa6.2□□□□□ -1.42
LRCH3-217ENST00000483442 PLAURQ03405 335 aa6.2□□□□□ -1.42
LRCH3-217ENST00000483442 SHISA2Q6UWI4 295 aa6.2□□□□□ -1.42
LRCH3-217ENST00000483442 ARXQ96QS3 562 aa6.2□□□□□ -1.42
LRCH3-217ENST00000483442 DNAJB12Q9NXW2 375 aaKnown RBP6.2□□□□□ -1.42
LRCH3-217ENST00000483442 BIVM-ERCC5R4GMW8 1640 aa6.2□□□□□ -1.42
LRCH3-217ENST00000483442 KDM5BQ9UGL1 1544 aa6.2□□□□□ -1.42
LRCH3-217ENST00000483442 A0A0A0MRY4 1105 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 SPDYE3A6NKU9 549 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 ZBTB42B2RXF5 422 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L15C9J2P7 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L10C9JJH3 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L13C9JLJ4 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L12C9JPN9 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L11C9JVI0 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L21D6R901 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L18D6R9N7 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L22D6RA61 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L17D6RBQ6 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L19D6RCP7 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L20D6RJB6 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 LILRB5O75023 590 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 APBA3O96018 575 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 NFKB1P19838 968 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 AFF1P51825 1210 aaKnown RBP6.19□□□□□ -1.42
LRCH3-217ENST00000483442 USP17L24Q0WX57 530 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 NEUROD1Q13562 356 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 RTN1Q16799 776 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 TRAPPC3LQ5T215 181 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 LARP1Q6PKG0 1096 aaKnown RBP6.19□□□□□ -1.42
LRCH3-217ENST00000483442 JPH1Q9HDC5 661 aaPredicted RBP6.19□□□□□ -1.42
LRCH3-217ENST00000483442 ZFATQ9P243 1243 aa6.19□□□□□ -1.42
LRCH3-217ENST00000483442 RBM19Q9Y4C8 960 aaKnown RBP6.19□□□□□ -1.42
LRCH3-217ENST00000483442 TGFBR3LH3BV60 316 aa6.18□□□□□ -1.42
LRCH3-217ENST00000483442 DYRK3O43781 588 aa6.18□□□□□ -1.42
LRCH3-217ENST00000483442 LMOD1P29536 600 aaPredicted RBP6.18□□□□□ -1.42
LRCH3-217ENST00000483442 INPP5BP32019 993 aa6.18□□□□□ -1.42
LRCH3-217ENST00000483442 CCINQ13939 588 aa6.18□□□□□ -1.42
LRCH3-217ENST00000483442 IER5Q5VY09 327 aa6.18□□□□□ -1.42
LRCH3-217ENST00000483442 PSAPL1Q6NUJ1 521 aa6.18□□□□□ -1.42
LRCH3-217ENST00000483442 ANKMY2Q8IV38 441 aa6.18□□□□□ -1.42
LRCH3-217ENST00000483442 CALR3Q96L12 384 aaKnown RBP6.18□□□□□ -1.42
LRCH3-217ENST00000483442 QTRT2Q9H974 415 aaKnown RBP6.18□□□□□ -1.42
LRCH3-217ENST00000483442 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.18□□□□□ -1.42
LRCH3-217ENST00000483442 KIF21BO75037 1637 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 KIF27Q86VH2 1401 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 WDR7Q9Y4E6 1490 aa6.17□□□□□ -1.42
LRCH3-217ENST00000483442 MAGI3Q5TCQ9 1506 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms