RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 PPP4R2Q9NY27 417 aa25.87■■□□□ 1.73
RXRB-204ENST00000483281 ATF5Q9Y2D1 282 aaPredicted RBP25.87■■□□□ 1.73
RXRB-204ENST00000483281 SIRT2Q8IXJ6 389 aa25.86■■□□□ 1.73
RXRB-204ENST00000483281 SSH3Q8TE77 659 aa25.86■■□□□ 1.73
RXRB-204ENST00000483281 RTL9Q8NET4 1388 aa25.84■■□□□ 1.73
RXRB-204ENST00000483281 HDAC1Q13547 482 aaPredicted RBP25.84■■□□□ 1.73
RXRB-204ENST00000483281 POLA2Q14181 598 aa25.84■■□□□ 1.73
RXRB-204ENST00000483281 HMMRO75330 724 aa25.84■■□□□ 1.73
RXRB-204ENST00000483281 ANKRD31Q8N7Z5 1873 aa25.83■■□□□ 1.73
RXRB-204ENST00000483281 CCDC152Q4G0S7 254 aa25.83■■□□□ 1.73
RXRB-204ENST00000483281 CCDC24Q8N4L8 307 aa25.83■■□□□ 1.73
RXRB-204ENST00000483281 PNMA6EA0A0J9YXQ4 647 aa25.82■■□□□ 1.72
RXRB-204ENST00000483281 SRGAP3O43295 1099 aa25.82■■□□□ 1.72
RXRB-204ENST00000483281 RWDD1Q9H446 243 aaPredicted RBP25.82■■□□□ 1.72
RXRB-204ENST00000483281 PDZRN3Q9UPQ7 1066 aa25.82■■□□□ 1.72
RXRB-204ENST00000483281 PDE6BP35913 854 aa25.82■■□□□ 1.72
RXRB-204ENST00000483281 PTGER2P43116 358 aa25.82■■□□□ 1.72
RXRB-204ENST00000483281 CRY2Q49AN0 593 aa25.82■■□□□ 1.72
RXRB-204ENST00000483281 SPON1Q9HCB6 807 aa25.82■■□□□ 1.72
RXRB-204ENST00000483281 C3orf67Q6ZVT6 689 aa25.8■■□□□ 1.72
RXRB-204ENST00000483281 KIF13BQ9NQT8 1826 aa25.8■■□□□ 1.72
RXRB-204ENST00000483281 RFX5P48382 616 aaPredicted RBP25.8■■□□□ 1.72
RXRB-204ENST00000483281 TNRC6CQ9HCJ0 1690 aaKnown RBP25.79■■□□□ 1.72
RXRB-204ENST00000483281 CCDC57Q2TAC2 916 aa25.79■■□□□ 1.72
RXRB-204ENST00000483281 GREM2Q9H772 168 aa25.79■■□□□ 1.72
RXRB-204ENST00000483281 IFIT5Q13325 482 aaKnown RBP25.78■■□□□ 1.72
RXRB-204ENST00000483281 C10orf71Q711Q0 1435 aa25.78■■□□□ 1.72
RXRB-204ENST00000483281 COPRSQ9NQ92 184 aa25.78■■□□□ 1.72
RXRB-204ENST00000483281 ITGA6P23229 1130 aa25.77■■□□□ 1.72
RXRB-204ENST00000483281 HOXA10P31260 410 aaPredicted RBP25.77■■□□□ 1.72
RXRB-204ENST00000483281 CHMP3Q9Y3E7 222 aa25.77■■□□□ 1.72
RXRB-204ENST00000483281 ANKRD18BA2A2Z9 1011 aa25.76■■□□□ 1.72
RXRB-204ENST00000483281 IGHDP01880 384 aa25.76■■□□□ 1.72
RXRB-204ENST00000483281 FAM161AQ3B820 660 aa25.76■■□□□ 1.72
RXRB-204ENST00000483281 CCDC136Q96JN2 1154 aa25.76■■□□□ 1.72
RXRB-204ENST00000483281 DCTPP1Q9H773 170 aa25.76■■□□□ 1.72
RXRB-204ENST00000483281 NOP58Q9Y2X3 529 aaKnown RBP25.76■■□□□ 1.72
RXRB-204ENST00000483281 PTPN12Q05209 780 aaKnown RBP25.76■■□□□ 1.71
RXRB-204ENST00000483281 FBXO3Q9UK99 471 aa25.76■■□□□ 1.71
RXRB-204ENST00000483281 SRGNP10124 158 aa25.74■■□□□ 1.71
RXRB-204ENST00000483281 DDX46Q7L014 1031 aaKnown RBP25.74■■□□□ 1.71
RXRB-204ENST00000483281 CCDC85AQ96PX6 553 aaPredicted RBP25.74■■□□□ 1.71
RXRB-204ENST00000483281 CRAMP1Q96RY5 1269 aa25.74■■□□□ 1.71
RXRB-204ENST00000483281 RPGRQ92834 1020 aaKnown RBP25.73■■□□□ 1.71
RXRB-204ENST00000483281 RBM17Q96I25 401 aaKnown RBP25.73■■□□□ 1.71
RXRB-204ENST00000483281 CDC5LQ99459 802 aaKnown RBP25.73■■□□□ 1.71
RXRB-204ENST00000483281 H0YIN7 160 aa25.73■■□□□ 1.71
RXRB-204ENST00000483281 NPR1P16066 1061 aa25.73■■□□□ 1.71
RXRB-204ENST00000483281 GCC1Q96CN9 775 aa25.73■■□□□ 1.71
RXRB-204ENST00000483281 SEC31BQ9NQW1 1179 aa25.73■■□□□ 1.71
RXRB-204ENST00000483281 CD2APQ9Y5K6 639 aa25.73■■□□□ 1.71
RXRB-204ENST00000483281 TGFB2P61812 414 aa25.72■■□□□ 1.71
RXRB-204ENST00000483281 HSP90AB4PQ58FF6 505 aa25.71■■□□□ 1.71
RXRB-204ENST00000483281 SMC5Q8IY18 1101 aa25.71■■□□□ 1.71
RXRB-204ENST00000483281 MASTLQ96GX5 879 aa25.71■■□□□ 1.71
RXRB-204ENST00000483281 SURF6O75683 361 aaKnown RBP25.7■■□□□ 1.7
RXRB-204ENST00000483281 CIAO1O76071 339 aa25.7■■□□□ 1.7
RXRB-204ENST00000483281 ALDH1B1P30837 517 aa25.7■■□□□ 1.7
RXRB-204ENST00000483281 RPS8P62241 208 aaKnown RBP25.7■■□□□ 1.7
RXRB-204ENST00000483281 STYK1Q6J9G0 422 aa25.7■■□□□ 1.7
RXRB-204ENST00000483281 C2CD5Q86YS7 1000 aa25.7■■□□□ 1.7
RXRB-204ENST00000483281 TAF1P21675 1872 aa25.7■■□□□ 1.7
RXRB-204ENST00000483281 TAF7LQ5H9L4 462 aa25.69■■□□□ 1.7
RXRB-204ENST00000483281 B4GALNT3Q6L9W6 998 aa25.69■■□□□ 1.7
RXRB-204ENST00000483281 PA2G4Q9UQ80 394 aaKnown RBP25.69■■□□□ 1.7
RXRB-204ENST00000483281 KDM2BQ8NHM5 1336 aa25.69■■□□□ 1.7
RXRB-204ENST00000483281 RAB11FIP3O75154 756 aa25.69■■□□□ 1.7
RXRB-204ENST00000483281 GRAPQ13588 217 aa25.69■■□□□ 1.7
RXRB-204ENST00000483281 CENPQQ7L2Z9 268 aaPredicted RBP25.69■■□□□ 1.7
RXRB-204ENST00000483281 ANKRD18AQ8IVF6 992 aa25.69■■□□□ 1.7
RXRB-204ENST00000483281 KLHDC4Q8TBB5 520 aa25.69■■□□□ 1.7
RXRB-204ENST00000483281 GRAPLQ8TC17 118 aaPredicted RBP25.69■■□□□ 1.7
RXRB-204ENST00000483281 ZNF594Q96JF6 807 aaPredicted RBP25.69■■□□□ 1.7
RXRB-204ENST00000483281 EYA2O00167 538 aa25.68■■□□□ 1.7
RXRB-204ENST00000483281 BBOX1O75936 387 aa25.68■■□□□ 1.7
RXRB-204ENST00000483281 COL11A2P13942 1736 aaPredicted RBP25.68■■□□□ 1.7
RXRB-204ENST00000483281 IGHMBP2P38935 993 aaKnown RBP25.68■■□□□ 1.7
RXRB-204ENST00000483281 G3BP1Q13283 466 aaKnown RBP eCLIP25.68■■□□□ 1.78e-8■■■■■ 29.2
RXRB-204ENST00000483281 LDHAL6AQ6ZMR3 332 aa25.67■■□□□ 1.7
RXRB-204ENST00000483281 CELF1Q92879 486 aaKnown RBP25.67■■□□□ 1.7
RXRB-204ENST00000483281 BSDC1Q9NW68 430 aaPredicted RBP25.67■■□□□ 1.7
RXRB-204ENST00000483281 DLEC1Q9Y238 1755 aa25.67■■□□□ 1.7
RXRB-204ENST00000483281 RIPOR2Q9Y4F9 1068 aa25.67■■□□□ 1.7
RXRB-204ENST00000483281 TMC4Q7Z404 712 aa25.66■■□□□ 1.7
RXRB-204ENST00000483281 MPHOSPH8Q99549 860 aa25.66■■□□□ 1.7
RXRB-204ENST00000483281 IL15P40933 162 aaPredicted RBP25.65■■□□□ 1.7
RXRB-204ENST00000483281 ATG9AQ7Z3C6 839 aa25.65■■□□□ 1.7
RXRB-204ENST00000483281 ERC1Q8IUD2 1116 aa25.65■■□□□ 1.7
RXRB-204ENST00000483281 EXOC6BQ9Y2D4 811 aa25.65■■□□□ 1.7
RXRB-204ENST00000483281 KIAA1551Q9HCM1 1747 aa25.65■■□□□ 1.7
RXRB-204ENST00000483281 CNKSR1Q969H4 720 aa25.65■■□□□ 1.7
RXRB-204ENST00000483281 LRP5O75197 1615 aa25.65■■□□□ 1.7
RXRB-204ENST00000483281 KCNA3P22001 575 aa25.64■■□□□ 1.7
RXRB-204ENST00000483281 CHRNA5P30532 468 aa25.64■■□□□ 1.7
RXRB-204ENST00000483281 PUS3Q9BZE2 481 aaKnown RBP25.64■■□□□ 1.7
RXRB-204ENST00000483281 LRRC24Q50LG9 513 aa25.64■■□□□ 1.69
RXRB-204ENST00000483281 SIL1Q9H173 461 aa25.64■■□□□ 1.69
RXRB-204ENST00000483281 COL4A1P02462 1669 aa25.63■■□□□ 1.69
RXRB-204ENST00000483281 CNNM1Q9NRU3 951 aa25.63■■□□□ 1.69
RXRB-204ENST00000483281 SPEF2Q9C093 1822 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms