RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
PHGDH-205ENST00000482968 DDX60Q8IY21 1712 aaKnown RBP18.66■□□□□ 0.58
PHGDH-205ENST00000482968 MMP10P09238 476 aa18.66■□□□□ 0.58
PHGDH-205ENST00000482968 CCDC57Q2TAC2 916 aa18.66■□□□□ 0.58
PHGDH-205ENST00000482968 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
PHGDH-205ENST00000482968 BCL11AQ9H165 835 aa18.66■□□□□ 0.58
PHGDH-205ENST00000482968 GREM2Q9H772 168 aa18.66■□□□□ 0.58
PHGDH-205ENST00000482968 PDZRN3Q9UPQ7 1066 aa18.66■□□□□ 0.58
PHGDH-205ENST00000482968 ABCC12Q96J65 1359 aa18.66■□□□□ 0.58
PHGDH-205ENST00000482968 RFX5P48382 616 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-205ENST00000482968 PRR5LQ6MZQ0 368 aa18.65■□□□□ 0.58
PHGDH-205ENST00000482968 SKAP1Q86WV1 359 aa18.65■□□□□ 0.58
PHGDH-205ENST00000482968 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
PHGDH-205ENST00000482968 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
PHGDH-205ENST00000482968 IFIT5Q13325 482 aaKnown RBP18.65■□□□□ 0.58
PHGDH-205ENST00000482968 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
PHGDH-205ENST00000482968 NLRP3Q96P20 1036 aa18.65■□□□□ 0.58
PHGDH-205ENST00000482968 SIL1Q9H173 461 aa18.65■□□□□ 0.58
PHGDH-205ENST00000482968 ITGA6P23229 1130 aa18.64■□□□□ 0.57
PHGDH-205ENST00000482968 C3orf67Q6ZVT6 689 aa18.64■□□□□ 0.57
PHGDH-205ENST00000482968 ZNF594Q96JF6 807 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-205ENST00000482968 ANP32EQ9BTT0 268 aa18.64■□□□□ 0.57
PHGDH-205ENST00000482968 NOP58Q9Y2X3 529 aaKnown RBP18.64■□□□□ 0.57
PHGDH-205ENST00000482968 ST5P78524 1137 aa18.63■□□□□ 0.57
PHGDH-205ENST00000482968 NUCB1Q02818 461 aa18.63■□□□□ 0.57
PHGDH-205ENST00000482968 OS9Q13438 667 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-205ENST00000482968 CCDC152Q4G0S7 254 aa18.63■□□□□ 0.57
PHGDH-205ENST00000482968 COPRSQ9NQ92 184 aa18.63■□□□□ 0.57
PHGDH-205ENST00000482968 G3BP1Q13283 466 aaKnown RBP eCLIP18.63■□□□□ 0.572e-6■■□□□ 13.8
PHGDH-205ENST00000482968 SLC16A10Q8TF71 515 aa18.63■□□□□ 0.57
PHGDH-205ENST00000482968 ANKRD18BA2A2Z9 1011 aa18.62■□□□□ 0.57
PHGDH-205ENST00000482968 SMARCA5O60264 1052 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-205ENST00000482968 SF3B3Q15393 1217 aaKnown RBP18.62■□□□□ 0.57
PHGDH-205ENST00000482968 HSP90AB4PQ58FF6 505 aa18.62■□□□□ 0.57
PHGDH-205ENST00000482968 TAF7LQ5H9L4 462 aa18.62■□□□□ 0.57
PHGDH-205ENST00000482968 CHD1LQ86WJ1 897 aa18.62■□□□□ 0.57
PHGDH-205ENST00000482968 LNPKQ9C0E8 428 aa18.62■□□□□ 0.57
PHGDH-205ENST00000482968 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-205ENST00000482968 LAMB2P55268 1798 aa18.62■□□□□ 0.57
PHGDH-205ENST00000482968 RAB11FIP3O75154 756 aa18.61■□□□□ 0.57
PHGDH-205ENST00000482968 SEC31BQ9NQW1 1179 aa18.61■□□□□ 0.57
PHGDH-205ENST00000482968 LRRCC1Q9C099 1032 aa18.6■□□□□ 0.57
PHGDH-205ENST00000482968 PSDA5PKW4 1024 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-205ENST00000482968 ZBTB7AO95365 584 aa18.59■□□□□ 0.57
PHGDH-205ENST00000482968 RHPN1Q8TCX5 695 aa18.59■□□□□ 0.57
PHGDH-205ENST00000482968 PUS3Q9BZE2 481 aaKnown RBP18.59■□□□□ 0.57
PHGDH-205ENST00000482968 CASZ1Q86V15 1759 aa18.59■□□□□ 0.57
PHGDH-205ENST00000482968 RGS3P49796 1198 aa18.58■□□□□ 0.57
PHGDH-205ENST00000482968 LRRC24Q50LG9 513 aa18.58■□□□□ 0.57
PHGDH-205ENST00000482968 KIF1BPQ96EK5 621 aa18.58■□□□□ 0.57
PHGDH-205ENST00000482968 IL1RAPL2Q9NP60 686 aa18.58■□□□□ 0.57
PHGDH-205ENST00000482968 SASH1O94885 1247 aa18.58■□□□□ 0.56
PHGDH-205ENST00000482968 LDHAL6AQ6ZMR3 332 aa18.58■□□□□ 0.56
PHGDH-205ENST00000482968 ERC1Q8IUD2 1116 aa18.58■□□□□ 0.56
PHGDH-205ENST00000482968 C16orf71Q8IYS4 520 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-205ENST00000482968 ATF5Q9Y2D1 282 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-205ENST00000482968 EYA2O00167 538 aa18.57■□□□□ 0.56
PHGDH-205ENST00000482968 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
PHGDH-205ENST00000482968 NRXN2Q9P2S2 1712 aa18.57■□□□□ 0.56
PHGDH-205ENST00000482968 RTL9Q8NET4 1388 aa18.56■□□□□ 0.56
PHGDH-205ENST00000482968 TNRC6CQ9HCJ0 1690 aaKnown RBP18.56■□□□□ 0.56
PHGDH-205ENST00000482968 TAF1P21675 1872 aa18.56■□□□□ 0.56
PHGDH-205ENST00000482968 PDE4AP27815 886 aa18.56■□□□□ 0.56
PHGDH-205ENST00000482968 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
PHGDH-205ENST00000482968 DDX46Q7L014 1031 aaKnown RBP18.55■□□□□ 0.56
PHGDH-205ENST00000482968 CDC5LQ99459 802 aaKnown RBP18.55■□□□□ 0.56
PHGDH-205ENST00000482968 MPHOSPH8Q99549 860 aa18.55■□□□□ 0.56
PHGDH-205ENST00000482968 CNNM1Q9NRU3 951 aa18.55■□□□□ 0.56
PHGDH-205ENST00000482968 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-205ENST00000482968 CIAO1O76071 339 aa18.55■□□□□ 0.56
PHGDH-205ENST00000482968 IGHMBP2P38935 993 aaKnown RBP18.55■□□□□ 0.56
PHGDH-205ENST00000482968 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-205ENST00000482968 TFCP2Q12800 502 aa18.55■□□□□ 0.56
PHGDH-205ENST00000482968 ANKRD18AQ8IVF6 992 aa18.55■□□□□ 0.56
PHGDH-205ENST00000482968 MTFR1LQ9H019 292 aa18.55■□□□□ 0.56
PHGDH-205ENST00000482968 FBXO3Q9UK99 471 aa18.55■□□□□ 0.56
PHGDH-205ENST00000482968 RIC1Q4ADV7 1423 aa18.54■□□□□ 0.56
PHGDH-205ENST00000482968 RPGRQ92834 1020 aaKnown RBP18.54■□□□□ 0.56
PHGDH-205ENST00000482968 CELF1Q92879 486 aaKnown RBP18.54■□□□□ 0.56
PHGDH-205ENST00000482968 RIPOR2Q9Y4F9 1068 aa18.54■□□□□ 0.56
PHGDH-205ENST00000482968 CRY2Q49AN0 593 aa18.53■□□□□ 0.56
PHGDH-205ENST00000482968 CLASRPQ8N2M8 674 aaKnown RBP18.53■□□□□ 0.56
PHGDH-205ENST00000482968 KLRG2A4D1S0 409 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-205ENST00000482968 PDE6BP35913 854 aa18.53■□□□□ 0.56
PHGDH-205ENST00000482968 RPS8P62241 208 aaKnown RBP18.53■□□□□ 0.56
PHGDH-205ENST00000482968 OTUD7AQ8TE49 926 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-205ENST00000482968 ANKRD31Q8N7Z5 1873 aa18.52■□□□□ 0.56
PHGDH-205ENST00000482968 CEP126Q9P2H0 1117 aa18.52■□□□□ 0.55
PHGDH-205ENST00000482968 COL4A1P02462 1669 aa18.51■□□□□ 0.55
PHGDH-205ENST00000482968 SPEF2Q9C093 1822 aa18.51■□□□□ 0.55
PHGDH-205ENST00000482968 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
PHGDH-205ENST00000482968 RBM17Q96I25 401 aaKnown RBP18.51■□□□□ 0.55
PHGDH-205ENST00000482968 POLD1P28340 1107 aa18.5■□□□□ 0.55
PHGDH-205ENST00000482968 AACSQ86V21 672 aa18.5■□□□□ 0.55
PHGDH-205ENST00000482968 EAF2Q96CJ1 260 aaPredicted RBP18.5■□□□□ 0.55
PHGDH-205ENST00000482968 BSDC1Q9NW68 430 aaPredicted RBP18.5■□□□□ 0.55
PHGDH-205ENST00000482968 SRGNP10124 158 aa18.5■□□□□ 0.55
PHGDH-205ENST00000482968 GRAPQ13588 217 aa18.5■□□□□ 0.55
PHGDH-205ENST00000482968 PLEKHM2Q8IWE5 1019 aa18.5■□□□□ 0.55
PHGDH-205ENST00000482968 HELBQ8NG08 1087 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms