RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 MAP3K10Q02779 954 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 DALRD3Q5D0E6 543 aaKnown RBP9.62□□□□□ -0.87
RBM39-233ENST00000482563 POTEEQ6S8J3 1075 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 NXPE4Q6UWF7 544 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 LAPTM4BQ86VI4 370 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 GPR152Q8TDT2 470 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 TRIM56Q9BRZ2 755 aaKnown RBP9.62□□□□□ -0.87
RBM39-233ENST00000482563 ATP8A1Q9Y2Q0 1164 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 ERBB3P21860 1342 aa9.61□□□□□ -0.87
RBM39-233ENST00000482563 ERVH48-1M5A8F1 160 aa9.61□□□□□ -0.87
RBM39-233ENST00000482563 SMAD7O15105 426 aaKnown RBP9.61□□□□□ -0.87
RBM39-233ENST00000482563 TSPAN6O43657 245 aa9.61□□□□□ -0.87
RBM39-233ENST00000482563 PSMA6P60900 246 aaKnown RBP9.61□□□□□ -0.87
RBM39-233ENST00000482563 DGKZQ13574 1117 aa9.61□□□□□ -0.87
RBM39-233ENST00000482563 LRRC41Q15345 812 aa9.61□□□□□ -0.87
RBM39-233ENST00000482563 DMRTA1Q5VZB9 504 aa9.61□□□□□ -0.87
RBM39-233ENST00000482563 NGLY1Q96IV0 654 aa9.61□□□□□ -0.87
RBM39-233ENST00000482563 PRDM10Q9NQV6 1147 aa9.61□□□□□ -0.87
RBM39-233ENST00000482563 KLK14Q9P0G3 267 aa9.61□□□□□ -0.87
RBM39-233ENST00000482563 AGERQ15109 404 aa9.6□□□□□ -0.87
RBM39-233ENST00000482563 MTFR1Q15390 333 aa9.6□□□□□ -0.87
RBM39-233ENST00000482563 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
RBM39-233ENST00000482563 C8orf34Q49A92 452 aa9.6□□□□□ -0.87
RBM39-233ENST00000482563 FAM169BQ8N8A8 192 aa9.6□□□□□ -0.87
RBM39-233ENST00000482563 SHDQ96IW2 340 aa9.6□□□□□ -0.87
RBM39-233ENST00000482563 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
RBM39-233ENST00000482563 PRR14Q9BWN1 585 aa9.6□□□□□ -0.87
RBM39-233ENST00000482563 FOXD3Q9UJU5 478 aaPredicted RBP9.6□□□□□ -0.87
RBM39-233ENST00000482563 COMMD10Q9Y6G5 202 aa9.6□□□□□ -0.87
RBM39-233ENST00000482563 A6NJY4 79 aa9.59□□□□□ -0.87
RBM39-233ENST00000482563 MINDY4BA8MYZ0 360 aa9.59□□□□□ -0.87
RBM39-233ENST00000482563 PDE6BP35913 854 aa9.59□□□□□ -0.87
RBM39-233ENST00000482563 EIF4A3P38919 411 aaKnown RBP9.59□□□□□ -0.87
RBM39-233ENST00000482563 TRMT44Q8IYL2 757 aaKnown RBP9.59□□□□□ -0.87
RBM39-233ENST00000482563 ZNF296Q8WUU4 475 aaPredicted RBP9.59□□□□□ -0.87
RBM39-233ENST00000482563 NOC4LQ9BVI4 516 aaKnown RBP9.59□□□□□ -0.87
RBM39-233ENST00000482563 POTECB2RU33 542 aa9.59□□□□□ -0.87
RBM39-233ENST00000482563 KIF3BO15066 747 aa9.59□□□□□ -0.87
RBM39-233ENST00000482563 LDHAP00338 332 aaKnown RBP9.59□□□□□ -0.87
RBM39-233ENST00000482563 C11orf91Q3C1V1 193 aa9.59□□□□□ -0.87
RBM39-233ENST00000482563 IFT43Q96FT9 208 aa9.59□□□□□ -0.87
RBM39-233ENST00000482563 ST7Q9NRC1 585 aa9.59□□□□□ -0.87
RBM39-233ENST00000482563 BSDC1Q9NW68 430 aaPredicted RBP9.59□□□□□ -0.87
RBM39-233ENST00000482563 C2orf27AQ580R0 203 aa9.58□□□□□ -0.88
RBM39-233ENST00000482563 INTS6LQ5JSJ4 861 aaKnown RBP9.58□□□□□ -0.88
RBM39-233ENST00000482563 SYCP2LQ5T4T6 812 aa9.58□□□□□ -0.88
RBM39-233ENST00000482563 MAMSTRQ6ZN01 415 aa9.58□□□□□ -0.88
RBM39-233ENST00000482563 ZNF511Q8NB15 262 aa9.58□□□□□ -0.88
RBM39-233ENST00000482563 KCTD15Q96SI1 283 aaPredicted RBP9.58□□□□□ -0.88
RBM39-233ENST00000482563 SPSB2Q99619 263 aa9.58□□□□□ -0.88
RBM39-233ENST00000482563 VPS9D1Q9Y2B5 631 aa9.58□□□□□ -0.88
RBM39-233ENST00000482563 PCDHB3Q9Y5E6 796 aa9.58□□□□□ -0.88
RBM39-233ENST00000482563 RPS6KL1Q9Y6S9 549 aa9.58□□□□□ -0.88
RBM39-233ENST00000482563 HMGB1P1B2RPK0 211 aaPredicted RBP9.57□□□□□ -0.88
RBM39-233ENST00000482563 EML1O00423 815 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 PDPK1O15530 556 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 ALDH1L1O75891 902 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 NEFLP07196 543 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 SETQ01105 290 aaPredicted RBP9.57□□□□□ -0.88
RBM39-233ENST00000482563 RASGRF1Q13972 1273 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 DHX8Q14562 1220 aaKnown RBP9.57□□□□□ -0.88
RBM39-233ENST00000482563 DDR2Q16832 855 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 PCNX4Q63HM2 1172 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 FBXL19Q6PCT2 694 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 CCDC24Q8N4L8 307 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 JMYQ8N9B5 988 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 PNISRQ8TF01 805 aaKnown RBP9.57□□□□□ -0.88
RBM39-233ENST00000482563 MPHOSPH6Q99547 160 aaKnown RBP9.57□□□□□ -0.88
RBM39-233ENST00000482563 ARNT2Q9HBZ2 717 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 CD2APQ9Y5K6 639 aa9.57□□□□□ -0.88
RBM39-233ENST00000482563 WDHD1O75717 1129 aaPredicted RBP9.56□□□□□ -0.88
RBM39-233ENST00000482563 TTF1Q15361 905 aaPredicted RBP9.56□□□□□ -0.88
RBM39-233ENST00000482563 NT5C1AQ9BXI3 368 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 BCO2Q9BYV7 579 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 KCNQ5Q9NR82 932 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 R3HCC1Q9Y3T6 440 aaKnown RBP9.56□□□□□ -0.88
RBM39-233ENST00000482563 TNFRSF21O75509 655 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 RGS20O76081 388 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 GARTP22102 1010 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 SMTNP53814 917 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 IFRD2Q12894 506 aaPredicted RBP9.56□□□□□ -0.88
RBM39-233ENST00000482563 C1orf53Q5VUE5 145 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 CCDC81Q6ZN84 652 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 DDX42Q86XP3 938 aaKnown RBP eCLIP9.56□□□□□ -0.88
RBM39-233ENST00000482563 CPLX3Q8WVH0 158 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 TMEM74Q96NL1 305 aa9.56□□□□□ -0.88
RBM39-233ENST00000482563 BHMG1C9JSJ3 638 aaPredicted RBP9.55□□□□□ -0.88
RBM39-233ENST00000482563 COL9A2Q14055 689 aaPredicted RBP9.55□□□□□ -0.88
RBM39-233ENST00000482563 C21orf62-AS1Q17RA5 79 aa9.55□□□□□ -0.88
RBM39-233ENST00000482563 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
RBM39-233ENST00000482563 THNSL2Q86YJ6 484 aa9.55□□□□□ -0.88
RBM39-233ENST00000482563 ALDH16A1Q8IZ83 802 aa9.55□□□□□ -0.88
RBM39-233ENST00000482563 ZDHHC1Q8WTX9 485 aa9.55□□□□□ -0.88
RBM39-233ENST00000482563 SRRTQ9BXP5 876 aaKnown RBP9.55□□□□□ -0.88
RBM39-233ENST00000482563 SRCIN1Q9C0H9 1055 aa9.55□□□□□ -0.88
RBM39-233ENST00000482563 NPHS2Q9NP85 383 aa9.55□□□□□ -0.88
RBM39-233ENST00000482563 UBP1Q9NZI7 540 aa9.55□□□□□ -0.88
RBM39-233ENST00000482563 GBP2P32456 591 aaPredicted RBP9.54□□□□□ -0.88
RBM39-233ENST00000482563 TREML1Q86YW5 311 aa9.54□□□□□ -0.88
RBM39-233ENST00000482563 LRCH3Q96II8 777 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms