RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 PROCP04070 461 aa10.15□□□□□ -0.78
SNX13-208ENST00000482558 RAB15P59190 212 aa10.15□□□□□ -0.78
SNX13-208ENST00000482558 NEDD1Q8NHV4 660 aa10.15□□□□□ -0.78
SNX13-208ENST00000482558 SLC52A1Q9NWF4 448 aa10.15□□□□□ -0.78
SNX13-208ENST00000482558 DYRK1BQ9Y463 629 aa10.15□□□□□ -0.78
SNX13-208ENST00000482558 NOS1P29475 1434 aa10.15□□□□□ -0.79
SNX13-208ENST00000482558 NPATQ14207 1427 aa10.15□□□□□ -0.79
SNX13-208ENST00000482558 ABCA6Q8N139 1617 aa10.15□□□□□ -0.79
SNX13-208ENST00000482558 MYO3AQ8NEV4 1616 aa10.15□□□□□ -0.79
SNX13-208ENST00000482558 DBN1Q16643 649 aa10.14□□□□□ -0.79
SNX13-208ENST00000482558 KDM5AP29375 1690 aaKnown RBP10.14□□□□□ -0.79
SNX13-208ENST00000482558 ZFYVE9O95405 1425 aa10.14□□□□□ -0.79
SNX13-208ENST00000482558 DIP2CQ9Y2E4 1556 aa10.14□□□□□ -0.79
SNX13-208ENST00000482558 RICTORQ6R327 1708 aa10.13□□□□□ -0.79
SNX13-208ENST00000482558 RHOQP17081 205 aa10.13□□□□□ -0.79
SNX13-208ENST00000482558 NGEFQ8N5V2 710 aa10.13□□□□□ -0.79
SNX13-208ENST00000482558 ACDQ96AP0 544 aa10.13□□□□□ -0.79
SNX13-208ENST00000482558 NSFL1CQ9UNZ2 370 aaKnown RBP10.13□□□□□ -0.79
SNX13-208ENST00000482558 CAMSAP1Q5T5Y3 1602 aa10.13□□□□□ -0.79
SNX13-208ENST00000482558 REREQ9P2R6 1566 aa10.13□□□□□ -0.79
SNX13-208ENST00000482558 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
SNX13-208ENST00000482558 RNF123Q5XPI4 1314 aa10.12□□□□□ -0.79
SNX13-208ENST00000482558 RBM47A0AV96 593 aaKnown RBP10.12□□□□□ -0.79
SNX13-208ENST00000482558 GGT6Q6P531 493 aa10.12□□□□□ -0.79
SNX13-208ENST00000482558 GALNT6Q8NCL4 622 aa10.12□□□□□ -0.79
SNX13-208ENST00000482558 TRERF1Q96PN7 1200 aa10.12□□□□□ -0.79
SNX13-208ENST00000482558 C14orf93Q9H972 538 aaKnown RBP10.12□□□□□ -0.79
SNX13-208ENST00000482558 PIK3C2GO75747 1445 aa10.12□□□□□ -0.79
SNX13-208ENST00000482558 PPLO60437 1756 aa10.11□□□□□ -0.79
SNX13-208ENST00000482558 PIK3C2BO00750 1634 aa10.11□□□□□ -0.79
SNX13-208ENST00000482558 ATP5J2-PTCD1G3V325 749 aa10.11□□□□□ -0.79
SNX13-208ENST00000482558 GPR25O00155 361 aa10.11□□□□□ -0.79
SNX13-208ENST00000482558 BRD2P25440 801 aaKnown RBP10.11□□□□□ -0.79
SNX13-208ENST00000482558 RIPOR1Q6ZS17 1223 aa10.11□□□□□ -0.79
SNX13-208ENST00000482558 CYLDQ9NQC7 956 aa10.11□□□□□ -0.79
SNX13-208ENST00000482558 SOX11P35716 441 aa10.1□□□□□ -0.79
SNX13-208ENST00000482558 AGLP35573 1532 aa10.1□□□□□ -0.79
SNX13-208ENST00000482558 ADGRF5Q8IZF2 1346 aa10.09□□□□□ -0.79
SNX13-208ENST00000482558 CENPJQ9HC77 1338 aaPredicted RBP10.09□□□□□ -0.79
SNX13-208ENST00000482558 BLMP54132 1417 aaPredicted RBP10.09□□□□□ -0.79
SNX13-208ENST00000482558 ZBBXA8MT70 800 aa10.09□□□□□ -0.79
SNX13-208ENST00000482558 NR1H3Q13133 447 aa10.09□□□□□ -0.79
SNX13-208ENST00000482558 WDR44Q5JSH3 913 aa10.09□□□□□ -0.79
SNX13-208ENST00000482558 CFAP70Q5T0N1 1121 aa10.09□□□□□ -0.79
SNX13-208ENST00000482558 HDGFL1Q5TGJ6 251 aa10.09□□□□□ -0.79
SNX13-208ENST00000482558 ALYREFQ86V81 257 aaKnown RBP10.09□□□□□ -0.79
SNX13-208ENST00000482558 GTPBP3Q969Y2 492 aaKnown RBP10.09□□□□□ -0.79
SNX13-208ENST00000482558 OIP5O43482 229 aa10.08□□□□□ -0.8
SNX13-208ENST00000482558 RAPGEF3O95398 923 aa10.08□□□□□ -0.8
SNX13-208ENST00000482558 FBXO45P0C2W1 286 aa10.08□□□□□ -0.8
SNX13-208ENST00000482558 MX2P20592 715 aa10.08□□□□□ -0.8
SNX13-208ENST00000482558 ADAMTS19Q8TE59 1207 aa10.08□□□□□ -0.8
SNX13-208ENST00000482558 NINLQ9Y2I6 1382 aa10.08□□□□□ -0.8
SNX13-208ENST00000482558 UGGT1Q9NYU2 1555 aa10.08□□□□□ -0.8
SNX13-208ENST00000482558 MROH2AA6NES4 1674 aa10.08□□□□□ -0.8
SNX13-208ENST00000482558 DIP2BQ9P265 1576 aa10.07□□□□□ -0.8
SNX13-208ENST00000482558 ERVK-7P63135 1459 aa10.07□□□□□ -0.8
SNX13-208ENST00000482558 K7ELQ4 463 aaPredicted RBP10.07□□□□□ -0.8
SNX13-208ENST00000482558 CC2D1BQ5T0F9 858 aaKnown RBP10.07□□□□□ -0.8
SNX13-208ENST00000482558 RIMBP3CA6NJZ7 1639 aa10.07□□□□□ -0.8
SNX13-208ENST00000482558 RIMBP3BA6NNM3 1639 aa10.07□□□□□ -0.8
SNX13-208ENST00000482558 RIMBP3Q9UFD9 1639 aa10.07□□□□□ -0.8
SNX13-208ENST00000482558 MEN1O00255 615 aa10.06□□□□□ -0.8
SNX13-208ENST00000482558 SEMA3FQ13275 785 aa10.06□□□□□ -0.8
SNX13-208ENST00000482558 WDR43Q15061 677 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNX13-208ENST00000482558 CYB5RLQ6IPT4 315 aa10.06□□□□□ -0.8
SNX13-208ENST00000482558 MYOM1P52179 1685 aa10.06□□□□□ -0.8
SNX13-208ENST00000482558 ADGRB1O14514 1584 aa10.05□□□□□ -0.8
SNX13-208ENST00000482558 A0A1W2PRU2 124 aa10.05□□□□□ -0.8
SNX13-208ENST00000482558 PPP2R1AP30153 589 aa10.05□□□□□ -0.8
SNX13-208ENST00000482558 MAP2K3P46734 347 aa10.05□□□□□ -0.8
SNX13-208ENST00000482558 FAM69CQ0P6D2 419 aa10.05□□□□□ -0.8
SNX13-208ENST00000482558 DHX37Q8IY37 1157 aaKnown RBP10.05□□□□□ -0.8
SNX13-208ENST00000482558 ALG2Q9H553 416 aa10.05□□□□□ -0.8
SNX13-208ENST00000482558 EVC2Q86UK5 1308 aa10.05□□□□□ -0.8
SNX13-208ENST00000482558 NSD2O96028 1365 aa10.04□□□□□ -0.8
SNX13-208ENST00000482558 NEXMIFQ5QGS0 1516 aa10.04□□□□□ -0.8
SNX13-208ENST00000482558 SPATA31C2B4DYI2 1134 aa10.04□□□□□ -0.8
SNX13-208ENST00000482558 NBPF10Q6P3W6 841 aaKnown RBP10.04□□□□□ -0.8
SNX13-208ENST00000482558 NBPF15Q8N660 670 aa10.04□□□□□ -0.8
SNX13-208ENST00000482558 GAS2L1Q99501 681 aaPredicted RBP10.04□□□□□ -0.8
SNX13-208ENST00000482558 GRIP2Q9C0E4 1043 aa10.04□□□□□ -0.8
SNX13-208ENST00000482558 USP32Q8NFA0 1604 aa10.04□□□□□ -0.8
SNX13-208ENST00000482558 ERVK-9P63128 1117 aa10.03□□□□□ -0.8
SNX13-208ENST00000482558 POU4F2Q12837 409 aa10.03□□□□□ -0.8
SNX13-208ENST00000482558 CNGB1Q14028 1251 aaPredicted RBP10.03□□□□□ -0.8
SNX13-208ENST00000482558 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
SNX13-208ENST00000482558 NLRP3Q96P20 1036 aa10.03□□□□□ -0.8
SNX13-208ENST00000482558 OXCT2Q9BYC2 517 aaPredicted RBP10.03□□□□□ -0.8
SNX13-208ENST00000482558 PREX1Q8TCU6 1659 aa10.02□□□□□ -0.8
SNX13-208ENST00000482558 YEATS2Q9ULM3 1422 aa10.02□□□□□ -0.81
SNX13-208ENST00000482558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.02□□□□□ -0.81
SNX13-208ENST00000482558 CLN3Q13286 438 aa10.02□□□□□ -0.81
SNX13-208ENST00000482558 ZNF592Q92610 1267 aa10.02□□□□□ -0.81
SNX13-208ENST00000482558 DRC1Q96MC2 740 aa10.02□□□□□ -0.81
SNX13-208ENST00000482558 CFHR5Q9BXR6 569 aa10.02□□□□□ -0.81
SNX13-208ENST00000482558 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
SNX13-208ENST00000482558 MKL2Q9ULH7 1088 aa10.02□□□□□ -0.81
SNX13-208ENST00000482558 QRICH2Q9H0J4 1663 aa10.02□□□□□ -0.81
SNX13-208ENST00000482558 F11P03951 625 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms