RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 KLHDC4Q8TBB5 520 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-220ENST00000482507 MTMR6Q9Y217 621 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 CCDC183Q5T5S1 534 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 NECAB1Q8N987 351 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 ZNF496Q96IT1 587 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-220ENST00000482507 TM6SF1Q9BZW5 370 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 RBM8AQ9Y5S9 174 aaKnown RBP17.81■□□□□ 0.44
ATG4B-220ENST00000482507 TAF6LQ9Y6J9 622 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 SIPA1L3O60292 1781 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-220ENST00000482507 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
ATG4B-220ENST00000482507 PTCD1O75127 700 aaKnown RBP17.8■□□□□ 0.44
ATG4B-220ENST00000482507 PHF14O94880 888 aa17.8■□□□□ 0.44
ATG4B-220ENST00000482507 HSP90AA2PQ14568 343 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-220ENST00000482507 PIGBQ92521 554 aa17.8■□□□□ 0.44
ATG4B-220ENST00000482507 SIL1Q9H173 461 aa17.8■□□□□ 0.44
ATG4B-220ENST00000482507 TRPC5Q9UL62 973 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-220ENST00000482507 R3HCC1Q9Y3T6 440 aaKnown RBP17.8■□□□□ 0.44
ATG4B-220ENST00000482507 CYP46A1Q9Y6A2 500 aa17.8■□□□□ 0.44
ATG4B-220ENST00000482507 PARP4Q9UKK3 1724 aaKnown RBP17.8■□□□□ 0.44
ATG4B-220ENST00000482507 ERVV-2B6SEH9 535 aa17.8■□□□□ 0.44
ATG4B-220ENST00000482507 RRP9O43818 475 aaKnown RBP17.8■□□□□ 0.44
ATG4B-220ENST00000482507 UBE2HP62256 183 aa17.8■□□□□ 0.44
ATG4B-220ENST00000482507 DNM1Q05193 864 aaKnown RBP17.8■□□□□ 0.44
ATG4B-220ENST00000482507 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
ATG4B-220ENST00000482507 GPATCH3Q96I76 525 aa17.8■□□□□ 0.44
ATG4B-220ENST00000482507 DDX21Q9NR30 783 aaKnown RBP eCLIP17.8■□□□□ 0.44
ATG4B-220ENST00000482507 EP400Q96L91 3159 aa17.8■□□□□ 0.44
ATG4B-220ENST00000482507 NWD2Q9ULI1 1742 aa17.79■□□□□ 0.44
ATG4B-220ENST00000482507 A0A0D9SFI3 127 aa17.79■□□□□ 0.44
ATG4B-220ENST00000482507 MPNDQ8N594 471 aa17.79■□□□□ 0.44
ATG4B-220ENST00000482507 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
ATG4B-220ENST00000482507 TTC5Q8N0Z6 440 aa17.79■□□□□ 0.44
ATG4B-220ENST00000482507 MAP4K1Q92918 833 aa17.79■□□□□ 0.44
ATG4B-220ENST00000482507 TMOD3Q9NYL9 352 aa17.79■□□□□ 0.44
ATG4B-220ENST00000482507 ASAP1Q9ULH1 1129 aa17.79■□□□□ 0.44
ATG4B-220ENST00000482507 MCM5P33992 734 aa17.78■□□□□ 0.44
ATG4B-220ENST00000482507 EPHA10Q5JZY3 1008 aa17.78■□□□□ 0.44
ATG4B-220ENST00000482507 PLEKHG2Q9H7P9 1386 aa17.78■□□□□ 0.44
ATG4B-220ENST00000482507 KAT6BQ8WYB5 2073 aa17.78■□□□□ 0.44
ATG4B-220ENST00000482507 HCLS1P14317 486 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-220ENST00000482507 BOLA2Q9H3K6 86 aa17.78■□□□□ 0.44
ATG4B-220ENST00000482507 USP25Q9UHP3 1055 aa17.78■□□□□ 0.44
ATG4B-220ENST00000482507 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.78■□□□□ 0.44
ATG4B-220ENST00000482507 SLC27A2O14975 620 aa17.77■□□□□ 0.44
ATG4B-220ENST00000482507 KCNQ2O43526 872 aa17.77■□□□□ 0.44
ATG4B-220ENST00000482507 G3BP1Q13283 466 aaKnown RBP eCLIP17.77■□□□□ 0.44
ATG4B-220ENST00000482507 TCEANC2Q96MN5 208 aa17.77■□□□□ 0.44
ATG4B-220ENST00000482507 ZSCAN31Q96LW9 406 aaPredicted RBP17.77■□□□□ 0.43
ATG4B-220ENST00000482507 FUCA2Q9BTY2 467 aa17.77■□□□□ 0.43
ATG4B-220ENST00000482507 SH2B1Q9NRF2 756 aaPredicted RBP17.77■□□□□ 0.43
ATG4B-220ENST00000482507 SNRKQ9NRH2 765 aa17.77■□□□□ 0.43
ATG4B-220ENST00000482507 ADAMTS7Q9UKP4 1686 aa17.77■□□□□ 0.43
ATG4B-220ENST00000482507 TNS2Q63HR2 1409 aa17.76■□□□□ 0.43
ATG4B-220ENST00000482507 PIP4K2AP48426 406 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-220ENST00000482507 PTF1AQ7RTS3 328 aa17.76■□□□□ 0.43
ATG4B-220ENST00000482507 USP16Q9Y5T5 823 aa17.76■□□□□ 0.43
ATG4B-220ENST00000482507 SHANK3Q9BYB0 1731 aa17.76■□□□□ 0.43
ATG4B-220ENST00000482507 MYL6BP14649 208 aa17.76■□□□□ 0.43
ATG4B-220ENST00000482507 GIMAP6Q6P9H5 292 aa17.76■□□□□ 0.43
ATG4B-220ENST00000482507 SEPT12Q8IYM1 358 aa17.76■□□□□ 0.43
ATG4B-220ENST00000482507 EDC3Q96F86 508 aaKnown RBP17.76■□□□□ 0.43
ATG4B-220ENST00000482507 C5P01031 1676 aa17.75■□□□□ 0.43
ATG4B-220ENST00000482507 VPS37CA5D8V6 355 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-220ENST00000482507 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
ATG4B-220ENST00000482507 TERF1P54274 439 aa17.75■□□□□ 0.43
ATG4B-220ENST00000482507 ZNF589Q86UQ0 364 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-220ENST00000482507 FAM184AQ8NB25 1140 aa17.75■□□□□ 0.43
ATG4B-220ENST00000482507 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-220ENST00000482507 NEURL1BA8MQ27 555 aa17.74■□□□□ 0.43
ATG4B-220ENST00000482507 PTMAP06454 111 aaKnown RBP17.74■□□□□ 0.43
ATG4B-220ENST00000482507 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-220ENST00000482507 UVSSAQ2YD98 709 aa17.74■□□□□ 0.43
ATG4B-220ENST00000482507 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
ATG4B-220ENST00000482507 ZNF830Q96NB3 372 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-220ENST00000482507 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
ATG4B-220ENST00000482507 MED23Q9ULK4 1368 aa17.74■□□□□ 0.43
ATG4B-220ENST00000482507 KCNJ4P48050 445 aa17.74■□□□□ 0.43
ATG4B-220ENST00000482507 XAGE3Q8WTP9 111 aa17.74■□□□□ 0.43
ATG4B-220ENST00000482507 ATP6V1DQ9Y5K8 247 aa17.74■□□□□ 0.43
ATG4B-220ENST00000482507 SCN11AQ9UI33 1791 aa17.74■□□□□ 0.43
ATG4B-220ENST00000482507 GCKRQ14397 625 aa17.73■□□□□ 0.43
ATG4B-220ENST00000482507 FAM173BQ6P4H8 233 aa17.73■□□□□ 0.43
ATG4B-220ENST00000482507 FSD1Q9BTV5 496 aa17.73■□□□□ 0.43
ATG4B-220ENST00000482507 ATG3Q9NT62 314 aa17.73■□□□□ 0.43
ATG4B-220ENST00000482507 ATRNO75882 1429 aa17.73■□□□□ 0.43
ATG4B-220ENST00000482507 ADCY5O95622 1261 aa17.73■□□□□ 0.43
ATG4B-220ENST00000482507 CDC37L1Q7L3B6 337 aa17.73■□□□□ 0.43
ATG4B-220ENST00000482507 MRC1P22897 1456 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 AP5Z1O43299 807 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 CHGBP05060 677 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 COPS6Q7L5N1 327 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 FMNL2Q96PY5 1086 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 MYD88Q99836 296 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 COL15A1P39059 1388 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 GLI3P10071 1580 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 HIP1O00291 1037 aa17.72■□□□□ 0.43
ATG4B-220ENST00000482507 LETM1O95202 739 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-220ENST00000482507 TOB2Q14106 344 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-220ENST00000482507 LRP10Q7Z4F1 713 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms