RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 GPTP24298 496 aa22.22■■□□□ 1.15
MRPL28-209ENST00000481453 LRRC24Q50LG9 513 aa22.22■■□□□ 1.15
MRPL28-209ENST00000481453 SYNE4Q8N205 404 aa22.22■■□□□ 1.15
MRPL28-209ENST00000481453 NGLY1Q96IV0 654 aa22.22■■□□□ 1.15
MRPL28-209ENST00000481453 DDX49Q9Y6V7 483 aaKnown RBP22.22■■□□□ 1.15
MRPL28-209ENST00000481453 LOC102724428A0A0B4J2F2 783 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 ERVV-1B6SEH8 477 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 EYA2O00167 538 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 EIF5P55010 431 aaKnown RBP22.21■■□□□ 1.15
MRPL28-209ENST00000481453 SIK1P57059 783 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 ITPK1Q13572 414 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 HSP90AB3PQ58FF7 597 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 CDHR2Q9BYE9 1310 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 CIAO1O76071 339 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 CSF1RP07333 972 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 IL15P40933 162 aaPredicted RBP22.21■■□□□ 1.15
MRPL28-209ENST00000481453 KLHL40Q2TBA0 621 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 DZIP3Q86Y13 1208 aaKnown RBP22.21■■□□□ 1.15
MRPL28-209ENST00000481453 FNBP4Q8N3X1 1017 aaPredicted RBP22.21■■□□□ 1.15
MRPL28-209ENST00000481453 TBC1D2BQ9UPU7 963 aa22.21■■□□□ 1.15
MRPL28-209ENST00000481453 PALLDQ8WX93 1383 aa22.2■■□□□ 1.14
MRPL28-209ENST00000481453 KCNQ2O43526 872 aa22.2■■□□□ 1.14
MRPL28-209ENST00000481453 CYP2E1P05181 493 aaPredicted RBP22.2■■□□□ 1.14
MRPL28-209ENST00000481453 ATP6V1AP38606 617 aa22.2■■□□□ 1.14
MRPL28-209ENST00000481453 RUFY2Q8WXA3 655 aa22.2■■□□□ 1.14
MRPL28-209ENST00000481453 PUS3Q9BZE2 481 aaKnown RBP22.2■■□□□ 1.14
MRPL28-209ENST00000481453 GPR108Q9NPR9 543 aa22.2■■□□□ 1.14
MRPL28-209ENST00000481453 CCDC87Q9NVE4 849 aa22.2■■□□□ 1.14
MRPL28-209ENST00000481453 MYH14Q7Z406 1995 aaKnown RBP22.2■■□□□ 1.14
MRPL28-209ENST00000481453 ZNF609O15014 1411 aa22.2■■□□□ 1.14
MRPL28-209ENST00000481453 NEK4P51957 841 aa22.19■■□□□ 1.14
MRPL28-209ENST00000481453 MCTP1Q6DN14 999 aa22.19■■□□□ 1.14
MRPL28-209ENST00000481453 CRKLP46109 303 aaKnown RBP22.19■■□□□ 1.14
MRPL28-209ENST00000481453 FAM227BQ96M60 508 aa22.19■■□□□ 1.14
MRPL28-209ENST00000481453 ZGPATQ8N5A5 531 aaKnown RBP22.18■■□□□ 1.14
MRPL28-209ENST00000481453 EDC3Q96F86 508 aaKnown RBP22.18■■□□□ 1.14
MRPL28-209ENST00000481453 SNRKQ9NRH2 765 aa22.18■■□□□ 1.14
MRPL28-209ENST00000481453 COL5A3P25940 1745 aaPredicted RBP22.18■■□□□ 1.14
MRPL28-209ENST00000481453 UBN2Q6ZU65 1347 aa22.18■■□□□ 1.14
MRPL28-209ENST00000481453 NMIQ13287 307 aaPredicted RBP22.18■■□□□ 1.14
MRPL28-209ENST00000481453 PKP1Q13835 747 aa22.18■■□□□ 1.14
MRPL28-209ENST00000481453 ZNF34Q8IZ26 560 aa22.18■■□□□ 1.14
MRPL28-209ENST00000481453 HIP1O00291 1037 aa22.17■■□□□ 1.14
MRPL28-209ENST00000481453 PTH1RQ03431 593 aa22.17■■□□□ 1.14
MRPL28-209ENST00000481453 CCDC57Q2TAC2 916 aa22.16■■□□□ 1.14
MRPL28-209ENST00000481453 KIAA1211Q6ZU35 1233 aa22.16■■□□□ 1.14
MRPL28-209ENST00000481453 FSD1Q9BTV5 496 aa22.16■■□□□ 1.14
MRPL28-209ENST00000481453 ZNF831Q5JPB2 1677 aa22.16■■□□□ 1.14
MRPL28-209ENST00000481453 MYH3P11055 1940 aa22.16■■□□□ 1.14
MRPL28-209ENST00000481453 SNX14Q9Y5W7 946 aa22.16■■□□□ 1.14
MRPL28-209ENST00000481453 THSD7AQ9UPZ6 1657 aa22.15■■□□□ 1.14
MRPL28-209ENST00000481453 A0A0D9SFI3 127 aa22.15■■□□□ 1.14
MRPL28-209ENST00000481453 RASEFQ8IZ41 740 aa22.15■■□□□ 1.14
MRPL28-209ENST00000481453 CCDC85AQ96PX6 553 aaPredicted RBP22.15■■□□□ 1.14
MRPL28-209ENST00000481453 HAUS7Q99871 368 aa22.15■■□□□ 1.14
MRPL28-209ENST00000481453 NDUFB9Q9Y6M9 179 aa22.15■■□□□ 1.14
MRPL28-209ENST00000481453 SPATA31A6Q5VVP1 1343 aa22.15■■□□□ 1.14
MRPL28-209ENST00000481453 TIMM10P62072 90 aa22.15■■□□□ 1.14
MRPL28-209ENST00000481453 MED23Q9ULK4 1368 aa22.15■■□□□ 1.14
MRPL28-209ENST00000481453 TTLL11Q8NHH1 800 aa22.14■■□□□ 1.14
MRPL28-209ENST00000481453 SMARCC1Q92922 1105 aaPredicted RBP22.14■■□□□ 1.14
MRPL28-209ENST00000481453 UPF3BQ9BZI7 483 aaKnown RBP22.14■■□□□ 1.14
MRPL28-209ENST00000481453 FBXO3Q9UK99 471 aa22.14■■□□□ 1.14
MRPL28-209ENST00000481453 CCDC171Q6TFL3 1326 aa22.14■■□□□ 1.13
MRPL28-209ENST00000481453 RFX7Q2KHR2 1363 aa22.13■■□□□ 1.13
MRPL28-209ENST00000481453 CTSWP56202 376 aa22.13■■□□□ 1.13
MRPL28-209ENST00000481453 KCNB2Q92953 911 aa22.13■■□□□ 1.13
MRPL28-209ENST00000481453 TRMT112Q9UI30 125 aaKnown RBP22.13■■□□□ 1.13
MRPL28-209ENST00000481453 IRS4O14654 1257 aaPredicted RBP22.12■■□□□ 1.13
MRPL28-209ENST00000481453 NCLP19338 710 aaKnown RBP22.12■■□□□ 1.13
MRPL28-209ENST00000481453 NEUROD6Q96NK8 337 aa22.12■■□□□ 1.13
MRPL28-209ENST00000481453 LMBRD1Q9NUN5 540 aa22.12■■□□□ 1.13
MRPL28-209ENST00000481453 A0A1B0GUL7 405 aa22.12■■□□□ 1.13
MRPL28-209ENST00000481453 CAMTA2O94983 1202 aa22.12■■□□□ 1.13
MRPL28-209ENST00000481453 IFIT5Q13325 482 aaKnown RBP22.12■■□□□ 1.13
MRPL28-209ENST00000481453 TMX3Q96JJ7 454 aa22.12■■□□□ 1.13
MRPL28-209ENST00000481453 GREM2Q9H772 168 aa22.12■■□□□ 1.13
MRPL28-209ENST00000481453 RIC1Q4ADV7 1423 aa22.12■■□□□ 1.13
MRPL28-209ENST00000481453 CLCN1P35523 988 aa22.11■■□□□ 1.13
MRPL28-209ENST00000481453 MCM2P49736 904 aa22.11■■□□□ 1.13
MRPL28-209ENST00000481453 TRIM44Q96DX7 344 aaPredicted RBP22.11■■□□□ 1.13
MRPL28-209ENST00000481453 DNAJC2Q99543 621 aaKnown RBP22.11■■□□□ 1.13
MRPL28-209ENST00000481453 USP21Q9UK80 565 aa22.11■■□□□ 1.13
MRPL28-209ENST00000481453 CEP126Q9P2H0 1117 aa22.11■■□□□ 1.13
MRPL28-209ENST00000481453 NECTIN1Q15223 517 aa22.1■■□□□ 1.13
MRPL28-209ENST00000481453 PTF1AQ7RTS3 328 aa22.1■■□□□ 1.13
MRPL28-209ENST00000481453 ZDHHC9Q9Y397 364 aa22.1■■□□□ 1.13
MRPL28-209ENST00000481453 ITGA6P23229 1130 aa22.1■■□□□ 1.13
MRPL28-209ENST00000481453 ZNF589Q86UQ0 364 aaPredicted RBP22.1■■□□□ 1.13
MRPL28-209ENST00000481453 MAP4K1Q92918 833 aa22.1■■□□□ 1.13
MRPL28-209ENST00000481453 BCORQ6W2J9 1755 aa22.1■■□□□ 1.13
MRPL28-209ENST00000481453 LRP5O75197 1615 aa22.09■■□□□ 1.13
MRPL28-209ENST00000481453 CAVIN1Q6NZI2 390 aaKnown RBP22.09■■□□□ 1.13
MRPL28-209ENST00000481453 TTC14Q96N46 770 aa22.09■■□□□ 1.13
MRPL28-209ENST00000481453 PDE8AO60658 829 aa22.08■■□□□ 1.13
MRPL28-209ENST00000481453 CHGBP05060 677 aa22.08■■□□□ 1.13
MRPL28-209ENST00000481453 NASPP49321 788 aaPredicted RBP22.08■■□□□ 1.13
MRPL28-209ENST00000481453 CUL4AQ13619 759 aa22.08■■□□□ 1.13
MRPL28-209ENST00000481453 SUSD4Q5VX71 490 aa22.08■■□□□ 1.13
MRPL28-209ENST00000481453 LINC00116Q8NCU8 138 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms