RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 RTL9Q8NET4 1388 aa11.98□□□□□ -0.49
KDM4A-204ENST00000481296 FOXO4P98177 505 aa11.98□□□□□ -0.49
KDM4A-204ENST00000481296 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
KDM4A-204ENST00000481296 SLC10A5Q5PT55 438 aa11.98□□□□□ -0.49
KDM4A-204ENST00000481296 CHMP3Q9Y3E7 222 aa11.98□□□□□ -0.49
KDM4A-204ENST00000481296 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
KDM4A-204ENST00000481296 MTX1Q13505 466 aa11.97□□□□□ -0.49
KDM4A-204ENST00000481296 CCDC152Q4G0S7 254 aa11.97□□□□□ -0.49
KDM4A-204ENST00000481296 LMBR1LQ6UX01 489 aa11.97□□□□□ -0.49
KDM4A-204ENST00000481296 NLRP3Q96P20 1036 aa11.97□□□□□ -0.49
KDM4A-204ENST00000481296 CCDC85AQ96PX6 553 aaPredicted RBP11.97□□□□□ -0.49
KDM4A-204ENST00000481296 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
KDM4A-204ENST00000481296 SPON1Q9HCB6 807 aa11.97□□□□□ -0.49
KDM4A-204ENST00000481296 SLX4Q8IY92 1834 aa11.97□□□□□ -0.49
KDM4A-204ENST00000481296 PNMA6EA0A0J9YXQ4 647 aa11.96□□□□□ -0.49
KDM4A-204ENST00000481296 SRGAP3O43295 1099 aa11.96□□□□□ -0.49
KDM4A-204ENST00000481296 HMMRO75330 724 aa11.96□□□□□ -0.49
KDM4A-204ENST00000481296 PTGER2P43116 358 aa11.96□□□□□ -0.49
KDM4A-204ENST00000481296 C3orf67Q6ZVT6 689 aa11.96□□□□□ -0.49
KDM4A-204ENST00000481296 RPAP2Q8IXW5 612 aaPredicted RBP11.96□□□□□ -0.49
KDM4A-204ENST00000481296 BRIP1Q9BX63 1249 aa11.96□□□□□ -0.49
KDM4A-204ENST00000481296 GREM2Q9H772 168 aa11.96□□□□□ -0.49
KDM4A-204ENST00000481296 PCDHB15Q9Y5E8 787 aa11.96□□□□□ -0.49
KDM4A-204ENST00000481296 CSF1RP07333 972 aa11.95□□□□□ -0.5
KDM4A-204ENST00000481296 PDE6BP35913 854 aa11.95□□□□□ -0.5
KDM4A-204ENST00000481296 SF3B3Q15393 1217 aaKnown RBP11.95□□□□□ -0.5
KDM4A-204ENST00000481296 TTLL11Q8NHH1 800 aa11.95□□□□□ -0.5
KDM4A-204ENST00000481296 RPGRQ92834 1020 aaKnown RBP11.95□□□□□ -0.5
KDM4A-204ENST00000481296 ANKRD18BA2A2Z9 1011 aa11.94□□□□□ -0.5
KDM4A-204ENST00000481296 ITGA6P23229 1130 aa11.94□□□□□ -0.5
KDM4A-204ENST00000481296 ATP8B2P98198 1209 aa11.94□□□□□ -0.5
KDM4A-204ENST00000481296 IFIT5Q13325 482 aaKnown RBP11.94□□□□□ -0.5
KDM4A-204ENST00000481296 POLA2Q14181 598 aa11.94□□□□□ -0.5
KDM4A-204ENST00000481296 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
KDM4A-204ENST00000481296 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
KDM4A-204ENST00000481296 SIRT2Q8IXJ6 389 aa11.94□□□□□ -0.5
KDM4A-204ENST00000481296 SSH3Q8TE77 659 aa11.94□□□□□ -0.5
KDM4A-204ENST00000481296 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
KDM4A-204ENST00000481296 HDAC1Q13547 482 aaPredicted RBP11.93□□□□□ -0.5
KDM4A-204ENST00000481296 TAF7LQ5H9L4 462 aa11.93□□□□□ -0.5
KDM4A-204ENST00000481296 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
KDM4A-204ENST00000481296 CCDC136Q96JN2 1154 aa11.93□□□□□ -0.5
KDM4A-204ENST00000481296 CDC5LQ99459 802 aaKnown RBP11.93□□□□□ -0.5
KDM4A-204ENST00000481296 PPP4R2Q9NY27 417 aa11.93□□□□□ -0.5
KDM4A-204ENST00000481296 PDZRN3Q9UPQ7 1066 aa11.93□□□□□ -0.5
KDM4A-204ENST00000481296 FER1L6Q2WGJ9 1857 aa11.93□□□□□ -0.5
KDM4A-204ENST00000481296 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
KDM4A-204ENST00000481296 KLRG2A4D1S0 409 aaPredicted RBP11.92□□□□□ -0.5
KDM4A-204ENST00000481296 RFX5P48382 616 aaPredicted RBP11.92□□□□□ -0.5
KDM4A-204ENST00000481296 DDX46Q7L014 1031 aaKnown RBP11.92□□□□□ -0.5
KDM4A-204ENST00000481296 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
KDM4A-204ENST00000481296 SEC31BQ9NQW1 1179 aa11.92□□□□□ -0.5
KDM4A-204ENST00000481296 CCDC88AQ3V6T2 1871 aa11.91□□□□□ -0.5
KDM4A-204ENST00000481296 H0YIN7 160 aa11.91□□□□□ -0.5
KDM4A-204ENST00000481296 SRGNP10124 158 aa11.91□□□□□ -0.5
KDM4A-204ENST00000481296 NPR1P16066 1061 aa11.91□□□□□ -0.5
KDM4A-204ENST00000481296 CHRNA5P30532 468 aa11.91□□□□□ -0.5
KDM4A-204ENST00000481296 KLHDC4Q8TBB5 520 aa11.91□□□□□ -0.5
KDM4A-204ENST00000481296 MASTLQ96GX5 879 aa11.91□□□□□ -0.5
KDM4A-204ENST00000481296 RBM17Q96I25 401 aaKnown RBP11.91□□□□□ -0.5
KDM4A-204ENST00000481296 ZNF594Q96JF6 807 aaPredicted RBP11.91□□□□□ -0.5
KDM4A-204ENST00000481296 RWDD1Q9H446 243 aaPredicted RBP11.91□□□□□ -0.5
KDM4A-204ENST00000481296 PPP1R1BQ9UD71 204 aaPredicted RBP11.91□□□□□ -0.5
KDM4A-204ENST00000481296 PA2G4Q9UQ80 394 aaKnown RBP11.91□□□□□ -0.5
KDM4A-204ENST00000481296 IGHMBP2P38935 993 aaKnown RBP11.9□□□□□ -0.5
KDM4A-204ENST00000481296 PTPN12Q05209 780 aaKnown RBP11.9□□□□□ -0.5
KDM4A-204ENST00000481296 OS9Q13438 667 aaPredicted RBP11.9□□□□□ -0.5
KDM4A-204ENST00000481296 GRAPQ13588 217 aa11.9□□□□□ -0.5
KDM4A-204ENST00000481296 STYK1Q6J9G0 422 aa11.9□□□□□ -0.5
KDM4A-204ENST00000481296 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
KDM4A-204ENST00000481296 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
KDM4A-204ENST00000481296 GRAPLQ8TC17 118 aaPredicted RBP11.9□□□□□ -0.5
KDM4A-204ENST00000481296 CELF1Q92879 486 aaKnown RBP11.9□□□□□ -0.5
KDM4A-204ENST00000481296 SIL1Q9H173 461 aa11.9□□□□□ -0.5
KDM4A-204ENST00000481296 COPRSQ9NQ92 184 aa11.9□□□□□ -0.5
KDM4A-204ENST00000481296 DUOX1Q9NRD9 1551 aa11.9□□□□□ -0.5
KDM4A-204ENST00000481296 EXOC6BQ9Y2D4 811 aa11.9□□□□□ -0.5
KDM4A-204ENST00000481296 CD2APQ9Y5K6 639 aa11.9□□□□□ -0.5
KDM4A-204ENST00000481296 ZNF609O15014 1411 aa11.89□□□□□ -0.51
KDM4A-204ENST00000481296 SURF6O75683 361 aaKnown RBP11.89□□□□□ -0.51
KDM4A-204ENST00000481296 IGHDP01880 384 aa11.89□□□□□ -0.51
KDM4A-204ENST00000481296 HOXA10P31260 410 aaPredicted RBP11.89□□□□□ -0.51
KDM4A-204ENST00000481296 ZNF622Q969S3 477 aaKnown RBP eCLIP11.89□□□□□ -0.51
KDM4A-204ENST00000481296 CRAMP1Q96RY5 1269 aa11.89□□□□□ -0.51
KDM4A-204ENST00000481296 MPHOSPH8Q99549 860 aa11.89□□□□□ -0.51
KDM4A-204ENST00000481296 CNNM1Q9NRU3 951 aa11.89□□□□□ -0.51
KDM4A-204ENST00000481296 KDM2BQ8NHM5 1336 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 EYA2O00167 538 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 PPEF1O14829 653 aaPredicted RBP11.88□□□□□ -0.51
KDM4A-204ENST00000481296 CIAO1O76071 339 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 DPEP1P16444 411 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 TGFB2P61812 414 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 HSP90AB4PQ58FF6 505 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 LDHAL6AQ6ZMR3 332 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 CENPQQ7L2Z9 268 aaPredicted RBP11.88□□□□□ -0.51
KDM4A-204ENST00000481296 GCC1Q96CN9 775 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 NOP58Q9Y2X3 529 aaKnown RBP11.88□□□□□ -0.51
KDM4A-204ENST00000481296 PSME4Q14997 1843 aa11.88□□□□□ -0.51
KDM4A-204ENST00000481296 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms