RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 KRTAP4-6Q9BYQ5 205 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 C14orf93Q9H972 538 aaKnown RBP9.51□□□□□ -0.89
LRCH3-216ENST00000481048 USP21Q9UK80 565 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 DHX57Q6P158 1386 aaKnown RBP9.5□□□□□ -0.89
LRCH3-216ENST00000481048 YTHDC2Q9H6S0 1430 aaKnown RBP9.5□□□□□ -0.89
LRCH3-216ENST00000481048 GPR25O00155 361 aa9.5□□□□□ -0.89
LRCH3-216ENST00000481048 CELA2BP08218 269 aaPredicted RBP9.5□□□□□ -0.89
LRCH3-216ENST00000481048 STK26Q9P289 416 aa9.5□□□□□ -0.89
LRCH3-216ENST00000481048 KIF1AQ12756 1690 aa9.49□□□□□ -0.89
LRCH3-216ENST00000481048 PXDNQ92626 1479 aa9.49□□□□□ -0.89
LRCH3-216ENST00000481048 FMN2Q9NZ56 1722 aa9.49□□□□□ -0.89
LRCH3-216ENST00000481048 NR1H3Q13133 447 aa9.49□□□□□ -0.89
LRCH3-216ENST00000481048 TMEM132EQ6IEE7 984 aa9.49□□□□□ -0.89
LRCH3-216ENST00000481048 GAS2L1Q99501 681 aaPredicted RBP9.49□□□□□ -0.89
LRCH3-216ENST00000481048 MBIPQ9NS73 344 aa9.49□□□□□ -0.89
LRCH3-216ENST00000481048 DYRK1BQ9Y463 629 aa9.49□□□□□ -0.89
LRCH3-216ENST00000481048 RGPD8O14715 1765 aaPredicted RBP9.49□□□□□ -0.89
LRCH3-216ENST00000481048 MYOM2P54296 1465 aa9.48□□□□□ -0.89
LRCH3-216ENST00000481048 NRXN1Q9ULB1 1477 aa9.48□□□□□ -0.89
LRCH3-216ENST00000481048 SCTRP47872 440 aa9.48□□□□□ -0.89
LRCH3-216ENST00000481048 MCCD1P59942 119 aaPredicted RBP9.48□□□□□ -0.89
LRCH3-216ENST00000481048 PSME1Q06323 249 aa9.48□□□□□ -0.89
LRCH3-216ENST00000481048 KANK3Q6NY19 840 aa9.48□□□□□ -0.89
LRCH3-216ENST00000481048 CYP2U1Q7Z449 544 aa9.48□□□□□ -0.89
LRCH3-216ENST00000481048 ENAMQ9NRM1 1142 aa9.48□□□□□ -0.89
LRCH3-216ENST00000481048 PCDHB11Q9Y5F2 797 aa9.48□□□□□ -0.89
LRCH3-216ENST00000481048 DNMT3AQ9Y6K1 912 aaPredicted RBP9.48□□□□□ -0.89
LRCH3-216ENST00000481048 RGS12O14924 1447 aa9.48□□□□□ -0.89
LRCH3-216ENST00000481048 CLN3Q13286 438 aa9.47□□□□□ -0.89
LRCH3-216ENST00000481048 GPAT2Q6NUI2 795 aa9.47□□□□□ -0.89
LRCH3-216ENST00000481048 GTPBP3Q969Y2 492 aaKnown RBP9.47□□□□□ -0.89
LRCH3-216ENST00000481048 GRIP2Q9C0E4 1043 aa9.47□□□□□ -0.89
LRCH3-216ENST00000481048 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-216ENST00000481048 SPATA31A3Q5VYP0 1347 aa9.47□□□□□ -0.89
LRCH3-216ENST00000481048 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
LRCH3-216ENST00000481048 ATRNO75882 1429 aa9.47□□□□□ -0.89
LRCH3-216ENST00000481048 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.46□□□□□ -0.89
LRCH3-216ENST00000481048 H7C1W4 665 aa9.46□□□□□ -0.9
LRCH3-216ENST00000481048 CFAP70Q5T0N1 1121 aa9.46□□□□□ -0.9
LRCH3-216ENST00000481048 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.9
LRCH3-216ENST00000481048 KRT28Q7Z3Y7 464 aa9.46□□□□□ -0.9
LRCH3-216ENST00000481048 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
LRCH3-216ENST00000481048 ZNF592Q92610 1267 aa9.46□□□□□ -0.9
LRCH3-216ENST00000481048 ARHGEF10LQ9HCE6 1279 aa9.46□□□□□ -0.9
LRCH3-216ENST00000481048 PLEKHH1Q9ULM0 1364 aa9.46□□□□□ -0.9
LRCH3-216ENST00000481048 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
LRCH3-216ENST00000481048 BCL9LQ86UU0 1499 aa9.45□□□□□ -0.9
LRCH3-216ENST00000481048 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
LRCH3-216ENST00000481048 XPCQ01831 940 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-216ENST00000481048 UNC5CLQ8IV45 518 aa9.44□□□□□ -0.9
LRCH3-216ENST00000481048 TRERF1Q96PN7 1200 aa9.44□□□□□ -0.9
LRCH3-216ENST00000481048 POGKQ9P215 609 aa9.44□□□□□ -0.9
LRCH3-216ENST00000481048 SBNO1A3KN83 1393 aa9.44□□□□□ -0.9
LRCH3-216ENST00000481048 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
LRCH3-216ENST00000481048 ANKARQ7Z5J8 1434 aa9.43□□□□□ -0.9
LRCH3-216ENST00000481048 TRAK2O60296 914 aa9.43□□□□□ -0.9
LRCH3-216ENST00000481048 BANK1Q8NDB2 785 aa9.43□□□□□ -0.9
LRCH3-216ENST00000481048 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
LRCH3-216ENST00000481048 TIMMDC1Q9NPL8 285 aa9.43□□□□□ -0.9
LRCH3-216ENST00000481048 SLIT2O94813 1529 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 ARHGEF10O15013 1369 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 EIF3AQ14152 1382 aaKnown RBP9.42□□□□□ -0.9
LRCH3-216ENST00000481048 SPATA31C2B4DYI2 1134 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 IGHA1P01876 353 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 BCRP11274 1271 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 WDR44Q5JSH3 913 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 TAS1R3Q7RTX0 852 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 MTMR14Q8NCE2 650 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 RAB6BQ9NRW1 208 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 NDUFB9Q9Y6M9 179 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 NWD2Q9ULI1 1742 aa9.42□□□□□ -0.9
LRCH3-216ENST00000481048 TNS3Q68CZ2 1445 aa9.41□□□□□ -0.9
LRCH3-216ENST00000481048 CNTNAP5Q8WYK1 1306 aa9.41□□□□□ -0.9
LRCH3-216ENST00000481048 WASLO00401 505 aaPredicted RBP9.41□□□□□ -0.9
LRCH3-216ENST00000481048 GPR37L1O60883 481 aa9.41□□□□□ -0.9
LRCH3-216ENST00000481048 NEDD1Q8NHV4 660 aa9.41□□□□□ -0.9
LRCH3-216ENST00000481048 ACDQ96AP0 544 aa9.41□□□□□ -0.9
LRCH3-216ENST00000481048 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
LRCH3-216ENST00000481048 USP32Q8NFA0 1604 aa9.41□□□□□ -0.9
LRCH3-216ENST00000481048 ADGRB2O60241 1585 aa9.41□□□□□ -0.9
LRCH3-216ENST00000481048 F11P03951 625 aa9.4□□□□□ -0.9
LRCH3-216ENST00000481048 MX2P20592 715 aa9.4□□□□□ -0.9
LRCH3-216ENST00000481048 FOXK2Q01167 660 aa9.4□□□□□ -0.9
LRCH3-216ENST00000481048 DCAF11Q8TEB1 546 aa9.4□□□□□ -0.9
LRCH3-216ENST00000481048 ADGRB1O14514 1584 aa9.4□□□□□ -0.9
LRCH3-216ENST00000481048 GPRASP1Q5JY77 1395 aa9.39□□□□□ -0.91
LRCH3-216ENST00000481048 PHF20L1A8MW92 1017 aa9.39□□□□□ -0.91
LRCH3-216ENST00000481048 GNRH1P01148 92 aa9.39□□□□□ -0.91
LRCH3-216ENST00000481048 SAFB2Q14151 953 aaKnown RBP eCLIP9.39□□□□□ -0.91
LRCH3-216ENST00000481048 VPS72Q15906 364 aa9.39□□□□□ -0.91
LRCH3-216ENST00000481048 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
LRCH3-216ENST00000481048 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
LRCH3-216ENST00000481048 SNRKQ9NRH2 765 aa9.39□□□□□ -0.91
LRCH3-216ENST00000481048 NSFL1CQ9UNZ2 370 aaKnown RBP9.39□□□□□ -0.91
LRCH3-216ENST00000481048 TRAK1Q9UPV9 953 aa9.39□□□□□ -0.91
LRCH3-216ENST00000481048 BRWD3Q6RI45 1802 aa9.39□□□□□ -0.91
LRCH3-216ENST00000481048 BRPF1P55201 1214 aaPredicted RBP9.38□□□□□ -0.91
LRCH3-216ENST00000481048 CENPCQ03188 943 aa9.38□□□□□ -0.91
LRCH3-216ENST00000481048 PODNQ7Z5L7 613 aa9.38□□□□□ -0.91
LRCH3-216ENST00000481048 BEND7Q8N7W2 519 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms