RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 ARL10Q8N8L6 244 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 FBF1Q8TES7 1133 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 PAIP2BQ9ULR5 123 aaKnown RBP5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 LMTK3Q96Q04 1460 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 CDKL5O76039 1030 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 CCDC192P0DO97 292 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 RFC1P35251 1148 aaPredicted RBP5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 PCK1P35558 622 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 RIPK4P57078 832 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 HDGFL1Q5TGJ6 251 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 SPECC1LQ69YQ0 1117 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 ODF2LQ9ULJ1 636 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 RNF17Q9BXT8 1623 aaKnown RBP5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 hCG_2014768A0A024R1R8 64 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 CCDC6Q16204 474 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 SPTY2D1Q68D10 685 aaPredicted RBP5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 GOLGA5Q8TBA6 731 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 CDK5RAP3Q96JB5 506 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 TSPYL2Q9H2G4 693 aaPredicted RBP5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 ARFGAP3Q9NP61 516 aa5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 RBM27Q9P2N5 1060 aaKnown RBP5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 BIN2Q9UBW5 565 aaPredicted RBP5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 TMA7Q9Y2S6 64 aaKnown RBP5.22□□□□□ -1.57
GPCPD1-205ENST00000481038 ASXL1Q8IXJ9 1541 aa5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 EDC4Q6P2E9 1401 aaKnown RBP5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 ANKARQ7Z5J8 1434 aa5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 FAM177BA6PVY3 158 aa5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 ATP2C2O75185 946 aa5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 STK10O94804 968 aaKnown RBP5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 SSBP05455 408 aaKnown RBP eCLIP5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 B4GALNT4Q76KP1 1039 aa5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 DDX46Q7L014 1031 aaKnown RBP5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 BICD2Q8TD16 824 aa5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 SMARCE1Q969G3 411 aa5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 TACO1Q9BSH4 297 aaKnown RBP5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 NEURL4Q96JN8 1562 aa5.21□□□□□ -1.57
GPCPD1-205ENST00000481038 SMTNL1A8MU46 457 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 BAG4O95429 457 aaKnown RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 PSMA4P25789 261 aaKnown RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 VASPP50552 380 aaPredicted RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 MAP3K7CLP57077 242 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 HOOK3Q86VS8 718 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 SPATS2Q86XZ4 545 aaKnown RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 CCDC110Q8TBZ0 833 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 TEX13AQ9BXU3 409 aaPredicted RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 PRDM4Q9UKN5 801 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 LUC7L3O95232 432 aaKnown RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 DEUP1Q05D60 604 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 CCDC40Q4G0X9 1142 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 ZKSCAN2Q63HK3 967 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 MMS22LQ6ZRQ5 1243 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 SOS1Q07889 1333 aaPredicted RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 SPATA31E1Q6ZUB1 1445 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 DCAF8L1A6NGE4 600 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 UBAP1LF5GYI3 381 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 URI1O94763 535 aaPredicted RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 ACBD5Q5T8D3 534 aaPredicted RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 GKAP1Q5VSY0 366 aaPredicted RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 CCDC30Q5VVM6 783 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 WAPLQ7Z5K2 1190 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 PROCA1Q8NCQ7 364 aaPredicted RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 ABTB1Q969K4 478 aaPredicted RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 SYCE3A1L190 88 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 SLC8A1P32418 973 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 EP400NLQ6ZTU2 488 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 SREK1Q8WXA9 508 aaKnown RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 PRDM16Q9HAZ2 1276 aa5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 NOL7Q9UMY1 257 aaKnown RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 ARIH1Q9Y4X5 557 aaPredicted RBP5.21□□□□□ -1.58
GPCPD1-205ENST00000481038 GMNNO75496 209 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 ARHGAP25P42331 645 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 RWDD2BP57060 319 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 MIER3Q7Z3K6 550 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 DTNBP1Q96EV8 351 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 CCDC85AQ96PX6 553 aaPredicted RBP5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 RABEP2Q9H5N1 569 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 USP25Q9UHP3 1055 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 G3BP2Q9UN86 482 aaKnown RBP5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 ACEP12821 1306 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 LRRD1A4D1F6 860 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 DNAJC8O75937 253 aaPredicted RBP5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 CEP85LQ5SZL2 805 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 CCDC171Q6TFL3 1326 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 EFCAB13Q8IY85 973 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 ZNF280CQ8ND82 737 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 TTC14Q96N46 770 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 NCKAP5LQ9HCH0 1330 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 TCEAL9Q9UHQ7 104 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 NCOA3Q9Y6Q9 1424 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 CAMSAP1Q5T5Y3 1602 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 COL17A1Q9UMD9 1497 aaPredicted RBP5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 PLEKHG3A1L390 1219 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 CAND2O75155 1236 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 IMMTQ16891 758 aaKnown RBP5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 GBP5Q96PP8 586 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 TSPYL4Q9UJ04 414 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 IKBKGQ9Y6K9 419 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 SPHKAPQ2M3C7 1700 aa5.2□□□□□ -1.58
GPCPD1-205ENST00000481038 INSRP06213 1382 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms