RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SYKP43405 635 aa10.88□□□□□ -0.67
VEGFA-212ENST00000480614 IMPG2Q9BZV3 1241 aa10.88□□□□□ -0.67
VEGFA-212ENST00000480614 SMC6Q96SB8 1091 aa10.88□□□□□ -0.67
VEGFA-212ENST00000480614 RTL9Q8NET4 1388 aa10.88□□□□□ -0.67
VEGFA-212ENST00000480614 JADE2Q9NQC1 790 aa10.88□□□□□ -0.67
VEGFA-212ENST00000480614 IBSPP21815 317 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-212ENST00000480614 ALDH3A1P30838 453 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 CEP135Q66GS9 1140 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 USP16Q9Y5T5 823 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 IDEP14735 1019 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 ZNF165P49910 485 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 PIP4K2BP78356 416 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 MAGI1Q96QZ7 1491 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-212ENST00000480614 ZWINTO95229 277 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 ST5P78524 1137 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 BMP2KLQ5H9B9 411 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 KIF21AQ7Z4S6 1674 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 ATP2A2P16615 1042 aaKnown RBP10.87□□□□□ -0.67
VEGFA-212ENST00000480614 CHMP4BP1P59074 171 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 ORC3Q9UBD5 711 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-212ENST00000480614 CALML3P27482 149 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 LRSAM1Q6UWE0 723 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 SSH1Q8WYL5 1049 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 SPAG5Q96R06 1193 aa10.87□□□□□ -0.67
VEGFA-212ENST00000480614 TACC1O75410 805 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 UQCRFS1P1P0C7P4 283 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 ARFGAP3Q9NP61 516 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 TSPY2A6NKD2 308 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 NOL3O60936 208 aaKnown RBP10.86□□□□□ -0.67
VEGFA-212ENST00000480614 STAT6P42226 847 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 PSMA7O14818 248 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 RBM25P49756 843 aaKnown RBP10.86□□□□□ -0.67
VEGFA-212ENST00000480614 KRT222Q8N1A0 295 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 DNA2P51530 1060 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 TICAM2Q86XR7 235 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 ESR2Q92731 530 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 IL16Q14005 1332 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 BICDL2A1A5D9 508 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 CTAGE9A4FU28 777 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 GNG11P61952 73 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 PLCG2P16885 1265 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 WTAPQ15007 396 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 USP25Q9UHP3 1055 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 CCDC6Q16204 474 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 MSL1Q68DK7 614 aa10.86□□□□□ -0.67
VEGFA-212ENST00000480614 CCDC152Q4G0S7 254 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 CCDC110Q8TBZ0 833 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 TSGA10Q9BZW7 698 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 MAP3K1Q13233 1512 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 GAS8O95995 478 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 C6orf229H3BNL8 230 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 RTN1Q16799 776 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 ZMYND15Q9H091 742 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 NESP48681 1621 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 SWAP70Q9UH65 585 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 MCM10Q7L590 875 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 GMNNO75496 209 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 MKRN1Q9UHC7 482 aaKnown RBP10.85□□□□□ -0.67
VEGFA-212ENST00000480614 SCAF11Q99590 1463 aaKnown RBP10.85□□□□□ -0.67
VEGFA-212ENST00000480614 ADCY5O95622 1261 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 MXRA7P84157 204 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 ZBTB16Q05516 673 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 ODF2LQ9ULJ1 636 aa10.85□□□□□ -0.67
VEGFA-212ENST00000480614 CKAP2LQ8IYA6 745 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 CCDC129Q6ZRS4 1044 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 RARSP54136 660 aaKnown RBP10.84□□□□□ -0.67
VEGFA-212ENST00000480614 MICU3Q86XE3 530 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 CLCN1P35523 988 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 C6orf50Q9HD87 102 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 CALM1P0DP23 149 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 CALM2P0DP24 149 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 CALM3P0DP25 149 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 MAP7D1Q3KQU3 841 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 TNPO1Q92973 898 aaKnown RBP10.84□□□□□ -0.67
VEGFA-212ENST00000480614 GNAT2P19087 354 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 HS1BP3Q53T59 392 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 TRMT1Q9NXH9 659 aaKnown RBP10.84□□□□□ -0.67
VEGFA-212ENST00000480614 CCT2P78371 535 aaKnown RBP10.84□□□□□ -0.67
VEGFA-212ENST00000480614 KRT83P78385 493 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 LAMC3Q9Y6N6 1575 aa10.84□□□□□ -0.67
VEGFA-212ENST00000480614 ZBTB43O43298 467 aa10.83□□□□□ -0.67
VEGFA-212ENST00000480614 MNAT1P51948 309 aa10.83□□□□□ -0.67
VEGFA-212ENST00000480614 CCDC117Q8IWD4 279 aaPredicted RBP10.83□□□□□ -0.67
VEGFA-212ENST00000480614 PSMD1Q99460 953 aa10.83□□□□□ -0.67
VEGFA-212ENST00000480614 HDAC9Q9UKV0 1011 aa10.83□□□□□ -0.67
VEGFA-212ENST00000480614 ADGRL1O94910 1474 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 SLC26A6Q9BXS9 759 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 ASXL1Q8IXJ9 1541 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 CTAGE15A4D2H0 777 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 PHACTR2O75167 634 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 CTAGE8P0CG41 777 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 CTAGE6Q86UF2 777 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 CTAGE4Q8IX94 777 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 ANKRD24Q8TF21 1146 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 OTUD6BQ8N6M0 293 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 MYH10P35580 1976 aa10.83□□□□□ -0.68
VEGFA-212ENST00000480614 PTCD1O75127 700 aaKnown RBP10.83□□□□□ -0.68
VEGFA-212ENST00000480614 CNGA1P29973 690 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms