RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 NUP98P52948 1817 aa14.96□□□□□ -0.01
TTC28-206ENST00000480563 CDHR2Q9BYE9 1310 aa14.95□□□□□ -0.02
TTC28-206ENST00000480563 KIAA2012Q0VF49 1180 aa14.95□□□□□ -0.02
TTC28-206ENST00000480563 TRPM4Q8TD43 1214 aa14.95□□□□□ -0.02
TTC28-206ENST00000480563 THUMPD2Q9BTF0 503 aaKnown RBP14.95□□□□□ -0.02
TTC28-206ENST00000480563 PCDH10Q9P2E7 1040 aa14.95□□□□□ -0.02
TTC28-206ENST00000480563 CNOT7Q9UIV1 285 aaKnown RBP14.95□□□□□ -0.02
TTC28-206ENST00000480563 ERBB4Q15303 1308 aa14.94□□□□□ -0.02
TTC28-206ENST00000480563 LAMB4A4D0S4 1761 aa14.94□□□□□ -0.02
TTC28-206ENST00000480563 NOGQ13253 232 aa14.94□□□□□ -0.02
TTC28-206ENST00000480563 USP48Q86UV5 1035 aa14.94□□□□□ -0.02
TTC28-206ENST00000480563 ZIC5Q96T25 663 aa14.94□□□□□ -0.02
TTC28-206ENST00000480563 H7C1D1 291 aa14.93□□□□□ -0.02
TTC28-206ENST00000480563 HUNKP57058 714 aa14.93□□□□□ -0.02
TTC28-206ENST00000480563 SHTN1A0MZ66 631 aa14.92□□□□□ -0.02
TTC28-206ENST00000480563 HCLS1P14317 486 aaPredicted RBP14.92□□□□□ -0.02
TTC28-206ENST00000480563 PDIA6Q15084 440 aa14.92□□□□□ -0.02
TTC28-206ENST00000480563 NFE2L2Q16236 605 aa14.92□□□□□ -0.02
TTC28-206ENST00000480563 DLK2Q6UY11 383 aa14.92□□□□□ -0.02
TTC28-206ENST00000480563 DDX46Q7L014 1031 aaKnown RBP14.92□□□□□ -0.02
TTC28-206ENST00000480563 LRP10Q7Z4F1 713 aa14.92□□□□□ -0.02
TTC28-206ENST00000480563 CASP8AP2Q9UKL3 1982 aa14.91□□□□□ -0.02
TTC28-206ENST00000480563 YDJCA8MPS7 323 aa14.91□□□□□ -0.02
TTC28-206ENST00000480563 EIF2S2P20042 333 aaKnown RBP14.91□□□□□ -0.02
TTC28-206ENST00000480563 MICALL2Q8IY33 904 aa14.91□□□□□ -0.02
TTC28-206ENST00000480563 PLEKHF1Q96S99 279 aa14.91□□□□□ -0.02
TTC28-206ENST00000480563 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
TTC28-206ENST00000480563 ANXA1P04083 346 aa14.9□□□□□ -0.02
TTC28-206ENST00000480563 GRAPQ13588 217 aa14.9□□□□□ -0.02
TTC28-206ENST00000480563 RGMBQ6NW40 437 aa14.9□□□□□ -0.02
TTC28-206ENST00000480563 NLRP10Q86W26 655 aa14.9□□□□□ -0.02
TTC28-206ENST00000480563 GRAPLQ8TC17 118 aaPredicted RBP14.9□□□□□ -0.02
TTC28-206ENST00000480563 KDM3BQ7LBC6 1761 aa14.9□□□□□ -0.02
TTC28-206ENST00000480563 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
TTC28-206ENST00000480563 HSP90AB3PQ58FF7 597 aa14.89□□□□□ -0.03
TTC28-206ENST00000480563 SAMD7Q7Z3H4 446 aa14.89□□□□□ -0.03
TTC28-206ENST00000480563 DPF2Q92785 391 aa14.89□□□□□ -0.03
TTC28-206ENST00000480563 TRMT112Q9UI30 125 aaKnown RBP14.89□□□□□ -0.03
TTC28-206ENST00000480563 TSPYL4Q9UJ04 414 aa14.89□□□□□ -0.03
TTC28-206ENST00000480563 FAM155AB1AL88 458 aaPredicted RBP14.88□□□□□ -0.03
TTC28-206ENST00000480563 KIF23Q02241 960 aaPredicted RBP14.88□□□□□ -0.03
TTC28-206ENST00000480563 AIMP1Q12904 312 aaKnown RBP14.88□□□□□ -0.03
TTC28-206ENST00000480563 WASHC4Q2M389 1173 aa14.88□□□□□ -0.03
TTC28-206ENST00000480563 TBC1D10BQ4KMP7 808 aaPredicted RBP14.88□□□□□ -0.03
TTC28-206ENST00000480563 COPS6Q7L5N1 327 aa14.88□□□□□ -0.03
TTC28-206ENST00000480563 KRT26Q7Z3Y9 468 aa14.88□□□□□ -0.03
TTC28-206ENST00000480563 TMC4Q7Z404 712 aa14.88□□□□□ -0.03
TTC28-206ENST00000480563 C2orf69Q8N8R5 385 aa14.88□□□□□ -0.03
TTC28-206ENST00000480563 CCDC102AQ96A19 550 aa14.88□□□□□ -0.03
TTC28-206ENST00000480563 SH3TC1Q8TE82 1336 aa14.88□□□□□ -0.03
TTC28-206ENST00000480563 PSMD14O00487 310 aa14.87□□□□□ -0.03
TTC28-206ENST00000480563 TCIRG1Q13488 830 aa14.87□□□□□ -0.03
TTC28-206ENST00000480563 GBA2Q9HCG7 927 aaPredicted RBP14.87□□□□□ -0.03
TTC28-206ENST00000480563 SAGE1Q9NXZ1 904 aa14.87□□□□□ -0.03
TTC28-206ENST00000480563 RIMBP2O15034 1052 aa14.86□□□□□ -0.03
TTC28-206ENST00000480563 EGFRP00533 1210 aa14.86□□□□□ -0.03
TTC28-206ENST00000480563 ZNF157P51786 506 aaPredicted RBP14.86□□□□□ -0.03
TTC28-206ENST00000480563 RBM26Q5T8P6 1007 aaKnown RBP14.86□□□□□ -0.03
TTC28-206ENST00000480563 XAGE3Q8WTP9 111 aa14.86□□□□□ -0.03
TTC28-206ENST00000480563 DCPSQ96C86 337 aaKnown RBP14.86□□□□□ -0.03
TTC28-206ENST00000480563 PNNQ9H307 717 aaKnown RBP14.86□□□□□ -0.03
TTC28-206ENST00000480563 DBNDD1Q9H9R9 158 aa14.86□□□□□ -0.03
TTC28-206ENST00000480563 RNF186Q9NXI6 227 aa14.86□□□□□ -0.03
TTC28-206ENST00000480563 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
TTC28-206ENST00000480563 MAPK8IP3Q9UPT6 1336 aa14.86□□□□□ -0.03
TTC28-206ENST00000480563 ADM5C9JUS6 153 aa14.85□□□□□ -0.03
TTC28-206ENST00000480563 TRPA1O75762 1119 aa14.85□□□□□ -0.03
TTC28-206ENST00000480563 SOX10P56693 466 aa14.85□□□□□ -0.03
TTC28-206ENST00000480563 NECTIN2Q92692 538 aa14.85□□□□□ -0.03
TTC28-206ENST00000480563 ZNF428Q96B54 188 aa14.85□□□□□ -0.03
TTC28-206ENST00000480563 C6orf229H3BNL8 230 aa14.84□□□□□ -0.03
TTC28-206ENST00000480563 RPS12P25398 132 aaKnown RBP14.84□□□□□ -0.03
TTC28-206ENST00000480563 KCNQ5Q9NR82 932 aa14.84□□□□□ -0.03
TTC28-206ENST00000480563 DLG5Q8TDM6 1919 aa14.84□□□□□ -0.03
TTC28-206ENST00000480563 DOK7Q18PE1 504 aa14.83□□□□□ -0.04
TTC28-206ENST00000480563 CELF1Q92879 486 aaKnown RBP14.83□□□□□ -0.04
TTC28-206ENST00000480563 CSRNP1Q96S65 589 aa14.83□□□□□ -0.04
TTC28-206ENST00000480563 BABAM1Q9NWV8 329 aa14.83□□□□□ -0.04
TTC28-206ENST00000480563 POLLQ9UGP5 575 aa14.83□□□□□ -0.04
TTC28-206ENST00000480563 TNRC18O15417 2968 aaPredicted RBP14.83□□□□□ -0.04
TTC28-206ENST00000480563 PDE4DIPQ5VU43 2346 aa14.83□□□□□ -0.04
TTC28-206ENST00000480563 DUOX1Q9NRD9 1551 aa14.82□□□□□ -0.04
TTC28-206ENST00000480563 ECE2O60344 883 aa14.82□□□□□ -0.04
TTC28-206ENST00000480563 RIPK4P57078 832 aa14.82□□□□□ -0.04
TTC28-206ENST00000480563 GPSM2P81274 684 aa14.82□□□□□ -0.04
TTC28-206ENST00000480563 SULF1Q8IWU6 871 aa14.82□□□□□ -0.04
TTC28-206ENST00000480563 EYA3Q99504 573 aa14.82□□□□□ -0.04
TTC28-206ENST00000480563 ANKRD36CQ5JPF3 1778 aa14.81□□□□□ -0.04
TTC28-206ENST00000480563 SLC10A3P09131 477 aa14.81□□□□□ -0.04
TTC28-206ENST00000480563 SF3B3Q15393 1217 aaKnown RBP14.81□□□□□ -0.04
TTC28-206ENST00000480563 KIF4BQ2VIQ3 1234 aa14.81□□□□□ -0.04
TTC28-206ENST00000480563 FAM89AQ96GI7 184 aa14.81□□□□□ -0.04
TTC28-206ENST00000480563 RTL9Q8NET4 1388 aa14.81□□□□□ -0.04
TTC28-206ENST00000480563 LAMB2P55268 1798 aa14.8□□□□□ -0.04
TTC28-206ENST00000480563 CTU1Q7Z7A3 348 aaKnown RBP14.8□□□□□ -0.04
TTC28-206ENST00000480563 TBC1D16Q8TBP0 767 aa14.8□□□□□ -0.04
TTC28-206ENST00000480563 CDCA5Q96FF9 252 aa14.8□□□□□ -0.04
TTC28-206ENST00000480563 ZC3H12CQ9C0D7 883 aaKnown RBP14.8□□□□□ -0.04
TTC28-206ENST00000480563 GGA3Q9NZ52 723 aa14.8□□□□□ -0.04
TTC28-206ENST00000480563 ASTN2O75129 1339 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms