RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 UQCRHLA0A096LP55 91 aa20.21■□□□□ 0.83
SH3D21-203ENST00000480549 UQCRHP07919 91 aa20.21■□□□□ 0.83
SH3D21-203ENST00000480549 TNPO1Q92973 898 aaKnown RBP20.21■□□□□ 0.83
SH3D21-203ENST00000480549 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
SH3D21-203ENST00000480549 DMTNQ08495 405 aa20.21■□□□□ 0.83
SH3D21-203ENST00000480549 GIGYF2Q6Y7W6 1299 aaKnown RBP20.21■□□□□ 0.83
SH3D21-203ENST00000480549 RUFY2Q8WXA3 655 aa20.21■□□□□ 0.83
SH3D21-203ENST00000480549 MARCH10Q8NA82 808 aaPredicted RBP20.2■□□□□ 0.82
SH3D21-203ENST00000480549 CICQ96RK0 1608 aaPredicted RBP20.2■□□□□ 0.82
SH3D21-203ENST00000480549 ATP5JP18859 108 aa20.2■□□□□ 0.82
SH3D21-203ENST00000480549 HLFQ16534 295 aa20.2■□□□□ 0.82
SH3D21-203ENST00000480549 ZSCAN30Q86W11 494 aa20.2■□□□□ 0.82
SH3D21-203ENST00000480549 RREB1Q92766 1687 aa20.19■□□□□ 0.82
SH3D21-203ENST00000480549 PCCAP05165 728 aaPredicted RBP20.19■□□□□ 0.82
SH3D21-203ENST00000480549 DBNDD2Q9BQY9 259 aa20.19■□□□□ 0.82
SH3D21-203ENST00000480549 NCLP19338 710 aaKnown RBP20.19■□□□□ 0.82
SH3D21-203ENST00000480549 BARGINQ6ZT62 677 aa20.19■□□□□ 0.82
SH3D21-203ENST00000480549 PAXIP1Q6ZW49 1069 aaPredicted RBP20.19■□□□□ 0.82
SH3D21-203ENST00000480549 ANP32BQ92688 251 aaKnown RBP20.19■□□□□ 0.82
SH3D21-203ENST00000480549 SNRKQ9NRH2 765 aa20.19■□□□□ 0.82
SH3D21-203ENST00000480549 SNX14Q9Y5W7 946 aa20.19■□□□□ 0.82
SH3D21-203ENST00000480549 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
SH3D21-203ENST00000480549 MCM2P49736 904 aa20.18■□□□□ 0.82
SH3D21-203ENST00000480549 PTH1RQ03431 593 aa20.18■□□□□ 0.82
SH3D21-203ENST00000480549 ZNF594Q96JF6 807 aaPredicted RBP20.18■□□□□ 0.82
SH3D21-203ENST00000480549 FAM227BQ96M60 508 aa20.18■□□□□ 0.82
SH3D21-203ENST00000480549 PLA2G12BQ9BX93 195 aa20.18■□□□□ 0.82
SH3D21-203ENST00000480549 VGLL3A8MV65 326 aa20.18■□□□□ 0.82
SH3D21-203ENST00000480549 HIP1O00291 1037 aa20.18■□□□□ 0.82
SH3D21-203ENST00000480549 NMIQ13287 307 aaPredicted RBP20.18■□□□□ 0.82
SH3D21-203ENST00000480549 ZBTB38Q8NAP3 1195 aaPredicted RBP20.18■□□□□ 0.82
SH3D21-203ENST00000480549 MYH3P11055 1940 aa20.17■□□□□ 0.82
SH3D21-203ENST00000480549 EYA2O00167 538 aa20.17■□□□□ 0.82
SH3D21-203ENST00000480549 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
SH3D21-203ENST00000480549 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
SH3D21-203ENST00000480549 RASEFQ8IZ41 740 aa20.17■□□□□ 0.82
SH3D21-203ENST00000480549 FAM89AQ96GI7 184 aa20.17■□□□□ 0.82
SH3D21-203ENST00000480549 TMX3Q96JJ7 454 aa20.17■□□□□ 0.82
SH3D21-203ENST00000480549 GPR108Q9NPR9 543 aa20.17■□□□□ 0.82
SH3D21-203ENST00000480549 CIAO1O76071 339 aa20.16■□□□□ 0.82
SH3D21-203ENST00000480549 PLCD3Q8N3E9 789 aa20.16■□□□□ 0.82
SH3D21-203ENST00000480549 ZGPATQ8N5A5 531 aaKnown RBP20.16■□□□□ 0.82
SH3D21-203ENST00000480549 UPF3BQ9BZI7 483 aaKnown RBP20.16■□□□□ 0.82
SH3D21-203ENST00000480549 ZNF609O15014 1411 aa20.16■□□□□ 0.82
SH3D21-203ENST00000480549 IL6STP40189 918 aaPredicted RBP20.16■□□□□ 0.82
SH3D21-203ENST00000480549 UTP14CQ5TAP6 766 aaKnown RBP20.16■□□□□ 0.82
SH3D21-203ENST00000480549 NLRP10Q86W26 655 aa20.16■□□□□ 0.82
SH3D21-203ENST00000480549 EDC3Q96F86 508 aaKnown RBP20.16■□□□□ 0.82
SH3D21-203ENST00000480549 FSD1Q9BTV5 496 aa20.16■□□□□ 0.82
SH3D21-203ENST00000480549 ACSBG1Q96GR2 724 aa20.16■□□□□ 0.82
SH3D21-203ENST00000480549 CDHR2Q9BYE9 1310 aa20.15■□□□□ 0.82
SH3D21-203ENST00000480549 A0A0D9SFI3 127 aa20.15■□□□□ 0.82
SH3D21-203ENST00000480549 SSFA2P28290 1259 aa20.15■□□□□ 0.82
SH3D21-203ENST00000480549 MED23Q9ULK4 1368 aa20.15■□□□□ 0.82
SH3D21-203ENST00000480549 CCDC171Q6TFL3 1326 aa20.15■□□□□ 0.82
SH3D21-203ENST00000480549 CSF1RP07333 972 aa20.15■□□□□ 0.82
SH3D21-203ENST00000480549 CWC22Q9HCG8 908 aaKnown RBP20.15■□□□□ 0.82
SH3D21-203ENST00000480549 CYP2E1P05181 493 aaPredicted RBP20.14■□□□□ 0.82
SH3D21-203ENST00000480549 HSP90AB3PQ58FF7 597 aa20.14■□□□□ 0.82
SH3D21-203ENST00000480549 KCNB2Q92953 911 aa20.14■□□□□ 0.82
SH3D21-203ENST00000480549 PUS3Q9BZE2 481 aaKnown RBP20.14■□□□□ 0.82
SH3D21-203ENST00000480549 GPTP24298 496 aa20.14■□□□□ 0.81
SH3D21-203ENST00000480549 CUL4AQ13619 759 aa20.14■□□□□ 0.81
SH3D21-203ENST00000480549 IPO4Q8TEX9 1081 aaKnown RBP20.14■□□□□ 0.81
SH3D21-203ENST00000480549 HAUS7Q99871 368 aa20.14■□□□□ 0.81
SH3D21-203ENST00000480549 ISY1Q9ULR0 285 aaKnown RBP20.14■□□□□ 0.81
SH3D21-203ENST00000480549 ZSCAN20P17040 1043 aaPredicted RBP20.14■□□□□ 0.81
SH3D21-203ENST00000480549 TERF1P54274 439 aa20.14■□□□□ 0.81
SH3D21-203ENST00000480549 SYNE4Q8N205 404 aa20.14■□□□□ 0.81
SH3D21-203ENST00000480549 CCDC9Q9Y3X0 531 aaKnown RBP20.13■□□□□ 0.81
SH3D21-203ENST00000480549 NDUFB9Q9Y6M9 179 aa20.13■□□□□ 0.81
SH3D21-203ENST00000480549 MYH14Q7Z406 1995 aaKnown RBP20.13■□□□□ 0.81
SH3D21-203ENST00000480549 RFX7Q2KHR2 1363 aa20.13■□□□□ 0.81
SH3D21-203ENST00000480549 ERVV-1B6SEH8 477 aa20.13■□□□□ 0.81
SH3D21-203ENST00000480549 INTS5Q6P9B9 1019 aaKnown RBP20.13■□□□□ 0.81
SH3D21-203ENST00000480549 JCADQ9P266 1359 aa20.13■□□□□ 0.81
SH3D21-203ENST00000480549 DDX11L8A8MPP1 907 aa20.12■□□□□ 0.81
SH3D21-203ENST00000480549 NECTIN1Q15223 517 aa20.12■□□□□ 0.81
SH3D21-203ENST00000480549 CLEC17AQ6ZS10 378 aa20.12■□□□□ 0.81
SH3D21-203ENST00000480549 TTC14Q96N46 770 aa20.12■□□□□ 0.81
SH3D21-203ENST00000480549 BCL9LQ86UU0 1499 aa20.12■□□□□ 0.81
SH3D21-203ENST00000480549 COL5A3P25940 1745 aaPredicted RBP20.12■□□□□ 0.81
SH3D21-203ENST00000480549 CCDC57Q2TAC2 916 aa20.12■□□□□ 0.81
SH3D21-203ENST00000480549 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
SH3D21-203ENST00000480549 TIMM10P62072 90 aa20.11■□□□□ 0.81
SH3D21-203ENST00000480549 CCDC173Q0VFZ6 552 aa20.11■□□□□ 0.81
SH3D21-203ENST00000480549 MTERF4Q7Z6M4 381 aaKnown RBP20.11■□□□□ 0.81
SH3D21-203ENST00000480549 MAP4K1Q92918 833 aa20.11■□□□□ 0.81
SH3D21-203ENST00000480549 TBC1D2BQ9UPU7 963 aa20.11■□□□□ 0.81
SH3D21-203ENST00000480549 UBAP1LF5GYI3 381 aa20.11■□□□□ 0.81
SH3D21-203ENST00000480549 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
SH3D21-203ENST00000480549 PKP1Q13835 747 aa20.11■□□□□ 0.81
SH3D21-203ENST00000480549 GBP4Q96PP9 640 aa20.11■□□□□ 0.81
SH3D21-203ENST00000480549 FBXO3Q9UK99 471 aa20.11■□□□□ 0.81
SH3D21-203ENST00000480549 NUCB2P80303 420 aa20.11■□□□□ 0.81
SH3D21-203ENST00000480549 PRPF40BQ6NWY9 871 aaKnown RBP20.1■□□□□ 0.81
SH3D21-203ENST00000480549 NEUROD6Q96NK8 337 aa20.1■□□□□ 0.81
SH3D21-203ENST00000480549 TMEM51Q9NW97 253 aa20.1■□□□□ 0.81
SH3D21-203ENST00000480549 UBN2Q6ZU65 1347 aa20.1■□□□□ 0.81
SH3D21-203ENST00000480549 ZNF831Q5JPB2 1677 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms