RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 NAT10Q9H0A0 1025 aaKnown RBP12.45□□□□□ -0.42
SIK3-210ENST00000480468 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
SIK3-210ENST00000480468 CFAP45Q9UL16 551 aa12.45□□□□□ -0.42
SIK3-210ENST00000480468 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
SIK3-210ENST00000480468 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
SIK3-210ENST00000480468 GTF2A1P52655 376 aaPredicted RBP12.45□□□□□ -0.42
SIK3-210ENST00000480468 NOM1Q5C9Z4 860 aaKnown RBP12.45□□□□□ -0.42
SIK3-210ENST00000480468 CC2D1AQ6P1N0 951 aaPredicted RBP12.45□□□□□ -0.42
SIK3-210ENST00000480468 REXO1L1PQ8IX06 675 aa12.45□□□□□ -0.42
SIK3-210ENST00000480468 C10orf67Q8IYJ2 551 aa12.45□□□□□ -0.42
SIK3-210ENST00000480468 MNS1Q8NEH6 495 aa12.45□□□□□ -0.42
SIK3-210ENST00000480468 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
SIK3-210ENST00000480468 RRP15Q9Y3B9 282 aaKnown RBP12.45□□□□□ -0.42
SIK3-210ENST00000480468 GLRX3O76003 335 aaKnown RBP12.44□□□□□ -0.42
SIK3-210ENST00000480468 IVLP07476 585 aa12.44□□□□□ -0.42
SIK3-210ENST00000480468 SFPQP23246 707 aaKnown RBP eCLIP12.44□□□□□ -0.42
SIK3-210ENST00000480468 PTH1RQ03431 593 aa12.44□□□□□ -0.42
SIK3-210ENST00000480468 RESTQ13127 1097 aa12.44□□□□□ -0.42
SIK3-210ENST00000480468 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
SIK3-210ENST00000480468 LARP1Q6PKG0 1096 aaKnown RBP12.44□□□□□ -0.42
SIK3-210ENST00000480468 CERS3Q8IU89 383 aa12.44□□□□□ -0.42
SIK3-210ENST00000480468 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
SIK3-210ENST00000480468 ZSCAN16Q9H4T2 348 aaPredicted RBP12.44□□□□□ -0.42
SIK3-210ENST00000480468 FAM208AQ9UK61 1670 aaKnown RBP12.44□□□□□ -0.42
SIK3-210ENST00000480468 TRIM66O15016 1216 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 MCM10Q7L590 875 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 GPR161Q8N6U8 529 aaKnown RBP12.43□□□□□ -0.42
SIK3-210ENST00000480468 SLC26A8Q96RN1 970 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 BPIFA3Q9BQP9 254 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 LCMT1Q9UIC8 334 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 A0A1B0GUL7 405 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 RPS6KA5O75582 802 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 SASH3O75995 380 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 MAP4K4O95819 1239 aaPredicted RBP12.43□□□□□ -0.42
SIK3-210ENST00000480468 ACTN2P35609 894 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 FLIIQ13045 1269 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 ARMCX5Q6P1M9 558 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
SIK3-210ENST00000480468 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
SIK3-210ENST00000480468 GUCY2CP25092 1073 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 PSME1Q06323 249 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 JAKMIP3Q5VZ66 844 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 SNRKQ9NRH2 765 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 UBTFL1P0CB47 393 aaPredicted RBP12.42□□□□□ -0.42
SIK3-210ENST00000480468 HSP90AB4PQ58FF6 505 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 CREB3L3Q68CJ9 461 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 TRIM65Q6PJ69 517 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 MSL3Q8N5Y2 521 aaKnown RBP12.42□□□□□ -0.42
SIK3-210ENST00000480468 COG3Q96JB2 828 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 USP44Q9H0E7 712 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 ARFGAP3Q9NP61 516 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 RCOR1Q9UKL0 485 aa12.42□□□□□ -0.42
SIK3-210ENST00000480468 SURF6O75683 361 aaKnown RBP12.41□□□□□ -0.42
SIK3-210ENST00000480468 SEC31AO94979 1220 aaKnown RBP12.41□□□□□ -0.42
SIK3-210ENST00000480468 MAGEA9P43362 315 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 ATL3Q6DD88 541 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 SULT6B1Q6IMI4 303 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 CCDC73Q6ZRK6 1079 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 FCHSD1Q86WN1 690 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 NME9Q86XW9 330 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 NCAPGQ9BPX3 1015 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 ADAM21Q9UKJ8 722 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 MLH3Q9UHC1 1453 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 EVCP57679 992 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 FAM160A1Q05DH4 1040 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 HOMER1Q86YM7 354 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 AOPEPQ8N6M6 819 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 ENGASEQ8NFI3 743 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 MAP4K1Q92918 833 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 FUT8Q9BYC5 575 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 ZCCHC17Q9NP64 241 aaKnown RBP12.41□□□□□ -0.42
SIK3-210ENST00000480468 SLC52A1Q9NWF4 448 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 TSPYL4Q9UJ04 414 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 RBM8AQ9Y5S9 174 aaKnown RBP12.41□□□□□ -0.42
SIK3-210ENST00000480468 PARP3Q9Y6F1 533 aa12.41□□□□□ -0.42
SIK3-210ENST00000480468 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
SIK3-210ENST00000480468 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.42
SIK3-210ENST00000480468 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
SIK3-210ENST00000480468 CCDC30Q5VVM6 783 aa12.4□□□□□ -0.42
SIK3-210ENST00000480468 BLOC1S2Q6QNY1 142 aa12.4□□□□□ -0.42
SIK3-210ENST00000480468 CCAR1Q8IX12 1150 aaKnown RBP12.4□□□□□ -0.42
SIK3-210ENST00000480468 RABGGTAQ92696 567 aa12.4□□□□□ -0.42
SIK3-210ENST00000480468 MYCBPQ99417 103 aaPredicted RBP12.4□□□□□ -0.42
SIK3-210ENST00000480468 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
SIK3-210ENST00000480468 ALKQ9UM73 1620 aa12.4□□□□□ -0.43
SIK3-210ENST00000480468 HIP1O00291 1037 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 DTNBO60941 627 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 RPS6KB1P23443 525 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 IDI1Q13907 227 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 LEKR1Q6ZMV7 388 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 RSRC2Q7L4I2 434 aaKnown RBP12.39□□□□□ -0.43
SIK3-210ENST00000480468 PPP1R42Q7Z4L9 355 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 CARD6Q9BX69 1037 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 MYH15Q9Y2K3 1946 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 MAP2K7O14733 419 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
SIK3-210ENST00000480468 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 TTC31Q49AM3 519 aaPredicted RBP12.39□□□□□ -0.43
SIK3-210ENST00000480468 TMC6Q7Z403 805 aa12.39□□□□□ -0.43
SIK3-210ENST00000480468 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms