RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 LRP5O75197 1615 aa20.96■□□□□ 0.95
SCAMP3-207ENST00000480219 KLRG2A4D1S0 409 aaPredicted RBP20.96■□□□□ 0.95
SCAMP3-207ENST00000480219 MMP10P09238 476 aa20.96■□□□□ 0.95
SCAMP3-207ENST00000480219 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
SCAMP3-207ENST00000480219 PTPN12Q05209 780 aaKnown RBP20.95■□□□□ 0.94
SCAMP3-207ENST00000480219 FBXO3Q9UK99 471 aa20.94■□□□□ 0.94
SCAMP3-207ENST00000480219 PARP3Q9Y6F1 533 aa20.94■□□□□ 0.94
SCAMP3-207ENST00000480219 GTF2E1P29083 439 aaPredicted RBP20.93■□□□□ 0.94
SCAMP3-207ENST00000480219 ST5P78524 1137 aa20.93■□□□□ 0.94
SCAMP3-207ENST00000480219 FAM161AQ3B820 660 aa20.93■□□□□ 0.94
SCAMP3-207ENST00000480219 CRY2Q49AN0 593 aa20.93■□□□□ 0.94
SCAMP3-207ENST00000480219 CCDC152Q4G0S7 254 aa20.93■□□□□ 0.94
SCAMP3-207ENST00000480219 R3HDM1Q15032 1099 aaKnown RBP20.92■□□□□ 0.94
SCAMP3-207ENST00000480219 MSL1Q68DK7 614 aa20.92■□□□□ 0.94
SCAMP3-207ENST00000480219 C3orf67Q6ZVT6 689 aa20.92■□□□□ 0.94
SCAMP3-207ENST00000480219 NLRP3Q96P20 1036 aa20.92■□□□□ 0.94
SCAMP3-207ENST00000480219 MTFR1LQ9H019 292 aa20.92■□□□□ 0.94
SCAMP3-207ENST00000480219 GREM2Q9H772 168 aa20.92■□□□□ 0.94
SCAMP3-207ENST00000480219 ANKRD31Q8N7Z5 1873 aa20.92■□□□□ 0.94
SCAMP3-207ENST00000480219 RAB11FIP3O75154 756 aa20.91■□□□□ 0.94
SCAMP3-207ENST00000480219 HSP90AB4PQ58FF6 505 aa20.91■□□□□ 0.94
SCAMP3-207ENST00000480219 BRIP1Q9BX63 1249 aa20.91■□□□□ 0.94
SCAMP3-207ENST00000480219 CIAO1O76071 339 aa20.9■□□□□ 0.94
SCAMP3-207ENST00000480219 ITGA6P23229 1130 aa20.9■□□□□ 0.94
SCAMP3-207ENST00000480219 NUCB1Q02818 461 aa20.9■□□□□ 0.94
SCAMP3-207ENST00000480219 IFIT5Q13325 482 aaKnown RBP20.9■□□□□ 0.94
SCAMP3-207ENST00000480219 CCDC57Q2TAC2 916 aa20.9■□□□□ 0.94
SCAMP3-207ENST00000480219 ANKRD18BA2A2Z9 1011 aa20.89■□□□□ 0.93
SCAMP3-207ENST00000480219 PA2G4Q9UQ80 394 aaKnown RBP20.89■□□□□ 0.93
SCAMP3-207ENST00000480219 C10orf71Q711Q0 1435 aa20.88■□□□□ 0.93
SCAMP3-207ENST00000480219 SURF6O75683 361 aaKnown RBP20.88■□□□□ 0.93
SCAMP3-207ENST00000480219 ERC1Q8IUD2 1116 aa20.88■□□□□ 0.93
SCAMP3-207ENST00000480219 SGIP1Q9BQI5 828 aa20.88■□□□□ 0.93
SCAMP3-207ENST00000480219 EXOC6BQ9Y2D4 811 aa20.88■□□□□ 0.93
SCAMP3-207ENST00000480219 HOXA10P31260 410 aaPredicted RBP20.87■□□□□ 0.93
SCAMP3-207ENST00000480219 PDZRN3Q9UPQ7 1066 aa20.87■□□□□ 0.93
SCAMP3-207ENST00000480219 CHMP3Q9Y3E7 222 aa20.87■□□□□ 0.93
SCAMP3-207ENST00000480219 KIF13BQ9NQT8 1826 aa20.87■□□□□ 0.93
SCAMP3-207ENST00000480219 EYA2O00167 538 aa20.86■□□□□ 0.93
SCAMP3-207ENST00000480219 NPHP1O15259 732 aa20.86■□□□□ 0.93
SCAMP3-207ENST00000480219 ATG9AQ7Z3C6 839 aa20.86■□□□□ 0.93
SCAMP3-207ENST00000480219 KLHDC4Q8TBB5 520 aa20.86■□□□□ 0.93
SCAMP3-207ENST00000480219 KIF1BPQ96EK5 621 aa20.86■□□□□ 0.93
SCAMP3-207ENST00000480219 COL4A1P02462 1669 aa20.86■□□□□ 0.93
SCAMP3-207ENST00000480219 SASH1O94885 1247 aa20.85■□□□□ 0.93
SCAMP3-207ENST00000480219 PDE6BP35913 854 aa20.85■□□□□ 0.93
SCAMP3-207ENST00000480219 IL15P40933 162 aaPredicted RBP20.85■□□□□ 0.93
SCAMP3-207ENST00000480219 CHD1LQ86WJ1 897 aa20.85■□□□□ 0.93
SCAMP3-207ENST00000480219 CCDC24Q8N4L8 307 aa20.85■□□□□ 0.93
SCAMP3-207ENST00000480219 CDC5LQ99459 802 aaKnown RBP20.85■□□□□ 0.93
SCAMP3-207ENST00000480219 G3BP1Q13283 466 aaKnown RBP eCLIP20.84■□□□□ 0.93
SCAMP3-207ENST00000480219 RHPN1Q8TCX5 695 aa20.84■□□□□ 0.93
SCAMP3-207ENST00000480219 ZNF594Q96JF6 807 aaPredicted RBP20.84■□□□□ 0.93
SCAMP3-207ENST00000480219 CCDC85AQ96PX6 553 aaPredicted RBP20.84■□□□□ 0.93
SCAMP3-207ENST00000480219 LRRCC1Q9C099 1032 aa20.84■□□□□ 0.93
SCAMP3-207ENST00000480219 SEC31BQ9NQW1 1179 aa20.84■□□□□ 0.93
SCAMP3-207ENST00000480219 RIPOR2Q9Y4F9 1068 aa20.84■□□□□ 0.93
SCAMP3-207ENST00000480219 COL11A2P13942 1736 aaPredicted RBP20.84■□□□□ 0.93
SCAMP3-207ENST00000480219 ZBTB7AO95365 584 aa20.83■□□□□ 0.93
SCAMP3-207ENST00000480219 CRAMP1Q96RY5 1269 aa20.83■□□□□ 0.93
SCAMP3-207ENST00000480219 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
SCAMP3-207ENST00000480219 DDX46Q7L014 1031 aaKnown RBP20.82■□□□□ 0.92
SCAMP3-207ENST00000480219 GPR108Q9NPR9 543 aa20.82■□□□□ 0.92
SCAMP3-207ENST00000480219 PSDA5PKW4 1024 aaPredicted RBP20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 SRGNP10124 158 aa20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 PTGER2P43116 358 aa20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 GRAPQ13588 217 aa20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 LRRC24Q50LG9 513 aa20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 TAF7LQ5H9L4 462 aa20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 LDHAL6AQ6ZMR3 332 aa20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 GRAPLQ8TC17 118 aaPredicted RBP20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 PUS3Q9BZE2 481 aaKnown RBP20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 SIL1Q9H173 461 aa20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 BSDC1Q9NW68 430 aaPredicted RBP20.81■□□□□ 0.92
SCAMP3-207ENST00000480219 SALL3Q9BXA9 1300 aa20.8■□□□□ 0.92
SCAMP3-207ENST00000480219 NPR1P16066 1061 aa20.8■□□□□ 0.92
SCAMP3-207ENST00000480219 POLD1P28340 1107 aa20.8■□□□□ 0.92
SCAMP3-207ENST00000480219 IGHMBP2P38935 993 aaKnown RBP20.8■□□□□ 0.92
SCAMP3-207ENST00000480219 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
SCAMP3-207ENST00000480219 ANKRD18AQ8IVF6 992 aa20.8■□□□□ 0.92
SCAMP3-207ENST00000480219 VGLL2Q8N8G2 317 aa20.8■□□□□ 0.92
SCAMP3-207ENST00000480219 CELF1Q92879 486 aaKnown RBP20.8■□□□□ 0.92
SCAMP3-207ENST00000480219 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
SCAMP3-207ENST00000480219 PDE4AP27815 886 aa20.79■□□□□ 0.92
SCAMP3-207ENST00000480219 RPGRQ92834 1020 aaKnown RBP20.79■□□□□ 0.92
SCAMP3-207ENST00000480219 RBM17Q96I25 401 aaKnown RBP20.79■□□□□ 0.92
SCAMP3-207ENST00000480219 MROH5Q6ZUA9 1318 aa20.78■□□□□ 0.92
SCAMP3-207ENST00000480219 LRRC37AA6NMS7 1700 aa20.78■□□□□ 0.92
SCAMP3-207ENST00000480219 KIAA1551Q9HCM1 1747 aa20.78■□□□□ 0.92
SCAMP3-207ENST00000480219 A0A1B0GUL6 1792 aa20.78■□□□□ 0.92
SCAMP3-207ENST00000480219 OS9Q13438 667 aaPredicted RBP20.78■□□□□ 0.92
SCAMP3-207ENST00000480219 STYK1Q6J9G0 422 aa20.78■□□□□ 0.92
SCAMP3-207ENST00000480219 MPHOSPH8Q99549 860 aa20.78■□□□□ 0.92
SCAMP3-207ENST00000480219 LNPKQ9C0E8 428 aa20.78■□□□□ 0.92
SCAMP3-207ENST00000480219 ATF5Q9Y2D1 282 aaPredicted RBP20.78■□□□□ 0.92
SCAMP3-207ENST00000480219 TAF1P21675 1872 aa20.77■□□□□ 0.92
SCAMP3-207ENST00000480219 SMARCA5O60264 1052 aaPredicted RBP20.77■□□□□ 0.92
SCAMP3-207ENST00000480219 BBOX1O75936 387 aa20.77■□□□□ 0.92
SCAMP3-207ENST00000480219 TMC4Q7Z404 712 aa20.77■□□□□ 0.92
SCAMP3-207ENST00000480219 MASTLQ96GX5 879 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms