RNA–Protein interactions for RNA: ENST00000480185.1

MMP11-209, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 370 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-209ENST00000480185 SMC1BQ8NDV3 1235 aa17.15■□□□□ 0.34
MMP11-209ENST00000480185 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
MMP11-209ENST00000480185 WDR90Q96KV7 1748 aa17.15■□□□□ 0.34
MMP11-209ENST00000480185 ZNF541Q9H0D2 1346 aa17.15■□□□□ 0.34
MMP11-209ENST00000480185 APLP1P51693 650 aa17.14■□□□□ 0.33
MMP11-209ENST00000480185 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
MMP11-209ENST00000480185 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
MMP11-209ENST00000480185 RTFDC1Q9BY42 306 aaPredicted RBP17.14■□□□□ 0.33
MMP11-209ENST00000480185 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
MMP11-209ENST00000480185 ZNF521Q96K83 1311 aa17.14■□□□□ 0.33
MMP11-209ENST00000480185 IQCA1LA6NCM1 817 aa17.13■□□□□ 0.33
MMP11-209ENST00000480185 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
MMP11-209ENST00000480185 FLIIQ13045 1269 aa17.13■□□□□ 0.33
MMP11-209ENST00000480185 DPP8Q6V1X1 898 aaPredicted RBP17.13■□□□□ 0.33
MMP11-209ENST00000480185 SUPT20HQ8NEM7 779 aa17.13■□□□□ 0.33
MMP11-209ENST00000480185 GPC2Q8N158 579 aa17.12■□□□□ 0.33
MMP11-209ENST00000480185 MPNDQ8N594 471 aa17.12■□□□□ 0.33
MMP11-209ENST00000480185 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
MMP11-209ENST00000480185 PPIP5K2O43314 1243 aa17.11■□□□□ 0.33
MMP11-209ENST00000480185 PDE8AO60658 829 aa17.11■□□□□ 0.33
MMP11-209ENST00000480185 EIF6P56537 245 aaKnown RBP17.11■□□□□ 0.33
MMP11-209ENST00000480185 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
MMP11-209ENST00000480185 COL4A5P29400 1685 aa17.1■□□□□ 0.33
MMP11-209ENST00000480185 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
MMP11-209ENST00000480185 LAMB2P55268 1798 aa17.1■□□□□ 0.33
MMP11-209ENST00000480185 NEURL1BA8MQ27 555 aa17.1■□□□□ 0.33
MMP11-209ENST00000480185 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
MMP11-209ENST00000480185 RPS8P62241 208 aaKnown RBP17.1■□□□□ 0.33
MMP11-209ENST00000480185 FKBP5Q13451 457 aaPredicted RBP17.1■□□□□ 0.33
MMP11-209ENST00000480185 AOC3Q16853 763 aa17.1■□□□□ 0.33
MMP11-209ENST00000480185 CCDC152Q4G0S7 254 aa17.1■□□□□ 0.33
MMP11-209ENST00000480185 NIM1KQ8IY84 436 aa17.1■□□□□ 0.33
MMP11-209ENST00000480185 KIAA2012Q0VF49 1180 aa17.09■□□□□ 0.33
MMP11-209ENST00000480185 CWF19L2Q2TBE0 894 aaKnown RBP17.09■□□□□ 0.33
MMP11-209ENST00000480185 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
MMP11-209ENST00000480185 TAF1DQ9H5J8 278 aaPredicted RBP17.09■□□□□ 0.33
MMP11-209ENST00000480185 DNAAF4Q8WXU2 420 aa17.08■□□□□ 0.32
MMP11-209ENST00000480185 HACL1Q9UJ83 578 aa17.08■□□□□ 0.32
MMP11-209ENST00000480185 ZNRF3Q9ULT6 936 aa17.08■□□□□ 0.32
MMP11-209ENST00000480185 H7C1W4 665 aa17.07■□□□□ 0.32
MMP11-209ENST00000480185 CHADLQ6NUI6 762 aa17.07■□□□□ 0.32
MMP11-209ENST00000480185 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
MMP11-209ENST00000480185 SEC31BQ9NQW1 1179 aa17.07■□□□□ 0.32
MMP11-209ENST00000480185 NSFL1CQ9UNZ2 370 aaKnown RBP17.07■□□□□ 0.32
MMP11-209ENST00000480185 GJA3Q9Y6H8 435 aa17.07■□□□□ 0.32
MMP11-209ENST00000480185 E9PSI1 815 aa17.06■□□□□ 0.32
MMP11-209ENST00000480185 POTEIP0CG38 1075 aa17.06■□□□□ 0.32
MMP11-209ENST00000480185 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
MMP11-209ENST00000480185 CTSWP56202 376 aa17.06■□□□□ 0.32
MMP11-209ENST00000480185 GCKRQ14397 625 aa17.06■□□□□ 0.32
MMP11-209ENST00000480185 UBE3BQ7Z3V4 1068 aa17.06■□□□□ 0.32
MMP11-209ENST00000480185 LDHDQ86WU2 507 aa17.06■□□□□ 0.32
MMP11-209ENST00000480185 EPHX2P34913 555 aa17.05■□□□□ 0.32
MMP11-209ENST00000480185 PNMA8AQ86V59 439 aaPredicted RBP17.05■□□□□ 0.32
MMP11-209ENST00000480185 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
MMP11-209ENST00000480185 LRRC37AA6NMS7 1700 aa17.04■□□□□ 0.32
MMP11-209ENST00000480185 DUOX1Q9NRD9 1551 aa17.04■□□□□ 0.32
MMP11-209ENST00000480185 GPSM2P81274 684 aa17.04■□□□□ 0.32
MMP11-209ENST00000480185 CXCL9Q07325 125 aa17.04■□□□□ 0.32
MMP11-209ENST00000480185 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
MMP11-209ENST00000480185 DNAJC5GQ8N7S2 189 aa17.04■□□□□ 0.32
MMP11-209ENST00000480185 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
MMP11-209ENST00000480185 PODXL2Q9NZ53 605 aa17.04■□□□□ 0.32
MMP11-209ENST00000480185 COL4A1P02462 1669 aa17.04■□□□□ 0.32
MMP11-209ENST00000480185 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
MMP11-209ENST00000480185 SCN4AP35499 1836 aa17.03■□□□□ 0.32
MMP11-209ENST00000480185 C6orf229H3BNL8 230 aa17.03■□□□□ 0.32
MMP11-209ENST00000480185 LMOD1P29536 600 aaPredicted RBP17.03■□□□□ 0.32
MMP11-209ENST00000480185 SCNN1DP51172 638 aa17.03■□□□□ 0.32
MMP11-209ENST00000480185 EAPPQ56P03 285 aaPredicted RBP17.03■□□□□ 0.32
MMP11-209ENST00000480185 ANKRD18AQ8IVF6 992 aa17.03■□□□□ 0.32
MMP11-209ENST00000480185 CDC5LQ99459 802 aaKnown RBP17.03■□□□□ 0.32
MMP11-209ENST00000480185 PLA2G12BQ9BX93 195 aa17.03■□□□□ 0.32
MMP11-209ENST00000480185 POLLQ9UGP5 575 aa17.03■□□□□ 0.32
MMP11-209ENST00000480185 F6X3S4 739 aa17.02■□□□□ 0.32
MMP11-209ENST00000480185 CASP7P55210 303 aa17.02■□□□□ 0.32
MMP11-209ENST00000480185 HTRA3P83110 453 aa17.02■□□□□ 0.32
MMP11-209ENST00000480185 SLFN5Q08AF3 891 aa17.02■□□□□ 0.32
MMP11-209ENST00000480185 BEND3Q5T5X7 828 aa17.02■□□□□ 0.32
MMP11-209ENST00000480185 TBC1D16Q8TBP0 767 aa17.02■□□□□ 0.32
MMP11-209ENST00000480185 EYA3Q99504 573 aa17.02■□□□□ 0.32
MMP11-209ENST00000480185 GREM2Q9H772 168 aa17.02■□□□□ 0.32
MMP11-209ENST00000480185 TAF1P21675 1872 aa17.01■□□□□ 0.31
MMP11-209ENST00000480185 TNIP1Q15025 636 aa17.01■□□□□ 0.31
MMP11-209ENST00000480185 CIAPIN1Q6FI81 312 aa17.01■□□□□ 0.31
MMP11-209ENST00000480185 ANKIB1Q9P2G1 1089 aa17.01■□□□□ 0.31
MMP11-209ENST00000480185 RAD17O75943 681 aa17■□□□□ 0.31
MMP11-209ENST00000480185 EPS15P42566 896 aa17■□□□□ 0.31
MMP11-209ENST00000480185 BSDC1Q9NW68 430 aaPredicted RBP17■□□□□ 0.31
MMP11-209ENST00000480185 GPRC5DQ9NZD1 345 aa17■□□□□ 0.31
MMP11-209ENST00000480185 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
MMP11-209ENST00000480185 YDJCA8MPS7 323 aa16.99■□□□□ 0.31
MMP11-209ENST00000480185 UFL1O94874 794 aa16.99■□□□□ 0.31
MMP11-209ENST00000480185 CSF1RP07333 972 aa16.99■□□□□ 0.31
MMP11-209ENST00000480185 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
MMP11-209ENST00000480185 GGA1Q9UJY5 639 aa16.99■□□□□ 0.31
MMP11-209ENST00000480185 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
MMP11-209ENST00000480185 XDHP47989 1333 aa16.98■□□□□ 0.31
MMP11-209ENST00000480185 PASKQ96RG2 1323 aa16.98■□□□□ 0.31
MMP11-209ENST00000480185 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms