RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 YDJCA8MPS7 323 aa16.28■□□□□ 0.2
USP11-208ENST00000480104 KIAA2012Q0VF49 1180 aa16.28■□□□□ 0.2
USP11-208ENST00000480104 SULF1Q8IWU6 871 aa16.28■□□□□ 0.2
USP11-208ENST00000480104 SUPT20HQ8NEM7 779 aa16.28■□□□□ 0.2
USP11-208ENST00000480104 ARMC5Q96C12 935 aa16.28■□□□□ 0.2
USP11-208ENST00000480104 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
USP11-208ENST00000480104 CRAMP1Q96RY5 1269 aa16.28■□□□□ 0.2
USP11-208ENST00000480104 COL25A1Q9BXS0 654 aaPredicted RBP16.28■□□□□ 0.2
USP11-208ENST00000480104 RTFDC1Q9BY42 306 aaPredicted RBP16.28■□□□□ 0.2
USP11-208ENST00000480104 GGA3Q9NZ52 723 aa16.28■□□□□ 0.2
USP11-208ENST00000480104 TM4SF4P48230 202 aa16.27■□□□□ 0.2
USP11-208ENST00000480104 MTHFSDQ2M296 383 aaKnown RBP16.27■□□□□ 0.2
USP11-208ENST00000480104 RBM26Q5T8P6 1007 aaKnown RBP16.27■□□□□ 0.2
USP11-208ENST00000480104 RBM17Q96I25 401 aaKnown RBP16.27■□□□□ 0.2
USP11-208ENST00000480104 CFHR5Q9BXR6 569 aa16.27■□□□□ 0.2
USP11-208ENST00000480104 ASTN2O75129 1339 aaPredicted RBP16.26■□□□□ 0.19
USP11-208ENST00000480104 POLR2AP24928 1970 aaKnown RBP16.26■□□□□ 0.19
USP11-208ENST00000480104 RGL2O15211 777 aa16.26■□□□□ 0.19
USP11-208ENST00000480104 IL13P35225 146 aa16.26■□□□□ 0.19
USP11-208ENST00000480104 HLFQ16534 295 aa16.26■□□□□ 0.19
USP11-208ENST00000480104 MOB2Q70IA6 237 aa16.26■□□□□ 0.19
USP11-208ENST00000480104 DPF2Q92785 391 aa16.26■□□□□ 0.19
USP11-208ENST00000480104 ATP6V0A2Q9Y487 856 aa16.26■□□□□ 0.19
USP11-208ENST00000480104 MKRN3Q13064 507 aaKnown RBP16.25■□□□□ 0.19
USP11-208ENST00000480104 DPP8Q6V1X1 898 aaPredicted RBP16.25■□□□□ 0.19
USP11-208ENST00000480104 NYXQ9GZU5 481 aa16.25■□□□□ 0.19
USP11-208ENST00000480104 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
USP11-208ENST00000480104 FKBP1BP68106 108 aa16.24■□□□□ 0.19
USP11-208ENST00000480104 TEFQ10587 303 aa16.24■□□□□ 0.19
USP11-208ENST00000480104 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
USP11-208ENST00000480104 TMEM106CQ9BVX2 250 aa16.24■□□□□ 0.19
USP11-208ENST00000480104 PTPN22Q9Y2R2 807 aa16.24■□□□□ 0.19
USP11-208ENST00000480104 USP16Q9Y5T5 823 aa16.24■□□□□ 0.19
USP11-208ENST00000480104 PSMD14O00487 310 aa16.23■□□□□ 0.19
USP11-208ENST00000480104 KCNQ3O43525 872 aa16.23■□□□□ 0.19
USP11-208ENST00000480104 PRO3102Q9H379 93 aa16.23■□□□□ 0.19
USP11-208ENST00000480104 UBE2Q2LH0YL09 131 aa16.22■□□□□ 0.19
USP11-208ENST00000480104 SOX1O00570 391 aaPredicted RBP16.22■□□□□ 0.19
USP11-208ENST00000480104 HMOX1P09601 288 aa16.22■□□□□ 0.19
USP11-208ENST00000480104 SREBF2Q12772 1141 aa16.22■□□□□ 0.19
USP11-208ENST00000480104 KIF4BQ2VIQ3 1234 aa16.22■□□□□ 0.19
USP11-208ENST00000480104 NBPF26B4DH59 902 aa16.21■□□□□ 0.19
USP11-208ENST00000480104 NBPF10Q6P3W6 841 aaKnown RBP16.21■□□□□ 0.19
USP11-208ENST00000480104 LRCH3Q96II8 777 aa16.21■□□□□ 0.19
USP11-208ENST00000480104 ZNF609O15014 1411 aa16.2■□□□□ 0.18
USP11-208ENST00000480104 MPNDQ8N594 471 aa16.2■□□□□ 0.18
USP11-208ENST00000480104 ZNF333Q96JL9 665 aa16.2■□□□□ 0.18
USP11-208ENST00000480104 IL17REQ8NFR9 667 aa16.19■□□□□ 0.18
USP11-208ENST00000480104 TTC28Q96AY4 2481 aa16.19■□□□□ 0.18
USP11-208ENST00000480104 ABCC4O15439 1325 aa16.19■□□□□ 0.18
USP11-208ENST00000480104 IBTKQ9P2D0 1353 aaPredicted RBP16.18■□□□□ 0.18
USP11-208ENST00000480104 RPS12P25398 132 aaKnown RBP16.18■□□□□ 0.18
USP11-208ENST00000480104 CD99L2Q8TCZ2 262 aa16.18■□□□□ 0.18
USP11-208ENST00000480104 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
USP11-208ENST00000480104 DUOX1Q9NRD9 1551 aa16.17■□□□□ 0.18
USP11-208ENST00000480104 SLC4A8Q2Y0W8 1093 aa16.17■□□□□ 0.18
USP11-208ENST00000480104 ANGEL2Q5VTE6 544 aaKnown RBP16.17■□□□□ 0.18
USP11-208ENST00000480104 DBNDD1Q9H9R9 158 aa16.17■□□□□ 0.18
USP11-208ENST00000480104 UBN2Q6ZU65 1347 aa16.17■□□□□ 0.18
USP11-208ENST00000480104 GPTP24298 496 aa16.16■□□□□ 0.18
USP11-208ENST00000480104 DPF3Q92784 378 aa16.16■□□□□ 0.18
USP11-208ENST00000480104 ERO1AQ96HE7 468 aa16.16■□□□□ 0.18
USP11-208ENST00000480104 EFCC1Q9HA90 598 aa16.16■□□□□ 0.18
USP11-208ENST00000480104 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
USP11-208ENST00000480104 ALDH1A1P00352 501 aa16.15■□□□□ 0.18
USP11-208ENST00000480104 SUSD4Q5VX71 490 aa16.15■□□□□ 0.18
USP11-208ENST00000480104 SP8Q8IXZ3 490 aa16.15■□□□□ 0.18
USP11-208ENST00000480104 NTSR2O95665 410 aa16.14■□□□□ 0.17
USP11-208ENST00000480104 MYCP01106 439 aaPredicted RBP16.14■□□□□ 0.17
USP11-208ENST00000480104 CAP1Q01518 475 aa16.14■□□□□ 0.17
USP11-208ENST00000480104 SCARF1Q14162 830 aa16.14■□□□□ 0.17
USP11-208ENST00000480104 TTLL12Q14166 644 aaPredicted RBP16.14■□□□□ 0.17
USP11-208ENST00000480104 PRDM6Q9NQX0 595 aa16.14■□□□□ 0.17
USP11-208ENST00000480104 KCNQ5Q9NR82 932 aa16.14■□□□□ 0.17
USP11-208ENST00000480104 SCAF8Q9UPN6 1271 aaKnown RBP16.14■□□□□ 0.17
USP11-208ENST00000480104 EYSQ5T1H1 3165 aa16.13■□□□□ 0.17
USP11-208ENST00000480104 BTBD11A6QL63 1104 aa16.13■□□□□ 0.17
USP11-208ENST00000480104 SNRPA1P09661 255 aaKnown RBP16.13■□□□□ 0.17
USP11-208ENST00000480104 PRAMEF18Q5VWM3 479 aa16.13■□□□□ 0.17
USP11-208ENST00000480104 MUC3AQ02505 3323 aa16.12■□□□□ 0.17
USP11-208ENST00000480104 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
USP11-208ENST00000480104 SLC9C1Q4G0N8 1177 aa16.12■□□□□ 0.17
USP11-208ENST00000480104 NLRP3Q96P20 1036 aa16.12■□□□□ 0.17
USP11-208ENST00000480104 STXBP5LQ9Y2K9 1186 aa16.12■□□□□ 0.17
USP11-208ENST00000480104 A0A1W2PPC1 479 aa16.11■□□□□ 0.17
USP11-208ENST00000480104 WTIPA6NIX2 430 aaPredicted RBP16.11■□□□□ 0.17
USP11-208ENST00000480104 BBOX1O75936 387 aa16.11■□□□□ 0.17
USP11-208ENST00000480104 MORC1Q86VD1 984 aa16.11■□□□□ 0.17
USP11-208ENST00000480104 IFNL1Q8IU54 200 aa16.11■□□□□ 0.17
USP11-208ENST00000480104 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.11■□□□□ 0.17
USP11-208ENST00000480104 DEFB123Q8N688 67 aa16.11■□□□□ 0.17
USP11-208ENST00000480104 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
USP11-208ENST00000480104 ERVV-1B6SEH8 477 aa16.1■□□□□ 0.17
USP11-208ENST00000480104 ECE2O60344 883 aa16.1■□□□□ 0.17
USP11-208ENST00000480104 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
USP11-208ENST00000480104 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
USP11-208ENST00000480104 WASHC4Q2M389 1173 aa16.1■□□□□ 0.17
USP11-208ENST00000480104 SPRYD7Q5W111 196 aa16.1■□□□□ 0.17
USP11-208ENST00000480104 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
USP11-208ENST00000480104 PTCH2Q9Y6C5 1203 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms