RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 SRGNP10124 158 aa14□□□□□ -0.17
CLDN11-205ENST00000480067 CRY2Q49AN0 593 aa14□□□□□ -0.17
CLDN11-205ENST00000480067 DDX46Q7L014 1031 aaKnown RBP14□□□□□ -0.17
CLDN11-205ENST00000480067 EXOC6Q8TAG9 804 aa14□□□□□ -0.17
CLDN11-205ENST00000480067 FHDC1Q9C0D6 1143 aaPredicted RBP14□□□□□ -0.17
CLDN11-205ENST00000480067 RIC1Q4ADV7 1423 aa13.99□□□□□ -0.17
CLDN11-205ENST00000480067 NRXN2Q9P2S2 1712 aa13.99□□□□□ -0.17
CLDN11-205ENST00000480067 A0A0G2JLW4 131 aa13.99□□□□□ -0.17
CLDN11-205ENST00000480067 CHRNA5P30532 468 aa13.99□□□□□ -0.17
CLDN11-205ENST00000480067 AAMPQ13685 434 aa13.99□□□□□ -0.17
CLDN11-205ENST00000480067 RABL6Q3YEC7 729 aaPredicted RBP13.99□□□□□ -0.17
CLDN11-205ENST00000480067 ZNF622Q969S3 477 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLDN11-205ENST00000480067 MASTLQ96GX5 879 aa13.99□□□□□ -0.17
CLDN11-205ENST00000480067 RBM17Q96I25 401 aaKnown RBP13.99□□□□□ -0.17
CLDN11-205ENST00000480067 GREM2Q9H772 168 aa13.99□□□□□ -0.17
CLDN11-205ENST00000480067 NPR1P16066 1061 aa13.98□□□□□ -0.17
CLDN11-205ENST00000480067 IFIT5Q13325 482 aaKnown RBP13.98□□□□□ -0.17
CLDN11-205ENST00000480067 CCDC57Q2TAC2 916 aa13.98□□□□□ -0.17
CLDN11-205ENST00000480067 ANKRD44Q8N8A2 993 aa13.98□□□□□ -0.17
CLDN11-205ENST00000480067 N4BP2Q86UW6 1770 aaPredicted RBP13.97□□□□□ -0.17
CLDN11-205ENST00000480067 SRGAP3O43295 1099 aa13.97□□□□□ -0.17
CLDN11-205ENST00000480067 DPEP1P16444 411 aa13.97□□□□□ -0.17
CLDN11-205ENST00000480067 ALDH1B1P30837 517 aa13.97□□□□□ -0.17
CLDN11-205ENST00000480067 HOXA10P31260 410 aaPredicted RBP13.97□□□□□ -0.17
CLDN11-205ENST00000480067 FAM161AQ3B820 660 aa13.97□□□□□ -0.17
CLDN11-205ENST00000480067 ANKRD18BA2A2Z9 1011 aa13.96□□□□□ -0.17
CLDN11-205ENST00000480067 ITGA6P23229 1130 aa13.96□□□□□ -0.17
CLDN11-205ENST00000480067 STYK1Q6J9G0 422 aa13.96□□□□□ -0.17
CLDN11-205ENST00000480067 RPAP2Q8IXW5 612 aaPredicted RBP13.96□□□□□ -0.17
CLDN11-205ENST00000480067 SYT17Q9BSW7 474 aa13.96□□□□□ -0.17
CLDN11-205ENST00000480067 ATP8B2P98198 1209 aa13.96□□□□□ -0.18
CLDN11-205ENST00000480067 MTX1Q13505 466 aa13.96□□□□□ -0.18
CLDN11-205ENST00000480067 TAF7LQ5H9L4 462 aa13.96□□□□□ -0.18
CLDN11-205ENST00000480067 CEP85Q6P2H3 762 aa13.96□□□□□ -0.18
CLDN11-205ENST00000480067 CNKSR1Q969H4 720 aa13.96□□□□□ -0.18
CLDN11-205ENST00000480067 CRAMP1Q96RY5 1269 aa13.96□□□□□ -0.18
CLDN11-205ENST00000480067 CDC5LQ99459 802 aaKnown RBP13.96□□□□□ -0.18
CLDN11-205ENST00000480067 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.18
CLDN11-205ENST00000480067 PIM2Q9P1W9 311 aa13.96□□□□□ -0.18
CLDN11-205ENST00000480067 BBOX1O75936 387 aa13.95□□□□□ -0.18
CLDN11-205ENST00000480067 KCNA3P22001 575 aa13.95□□□□□ -0.18
CLDN11-205ENST00000480067 RPS8P62241 208 aaKnown RBP13.95□□□□□ -0.18
CLDN11-205ENST00000480067 ANKRD18AQ8IVF6 992 aa13.95□□□□□ -0.18
CLDN11-205ENST00000480067 TTLL6Q8N841 843 aa13.95□□□□□ -0.18
CLDN11-205ENST00000480067 NLGN2Q8NFZ4 835 aa13.95□□□□□ -0.18
CLDN11-205ENST00000480067 RTL9Q8NET4 1388 aa13.95□□□□□ -0.18
CLDN11-205ENST00000480067 PNMA6EA0A0J9YXQ4 647 aa13.94□□□□□ -0.18
CLDN11-205ENST00000480067 HMMRO75330 724 aa13.94□□□□□ -0.18
CLDN11-205ENST00000480067 IGHMBP2P38935 993 aaKnown RBP13.94□□□□□ -0.18
CLDN11-205ENST00000480067 GRAPQ13588 217 aa13.94□□□□□ -0.18
CLDN11-205ENST00000480067 GRAPLQ8TC17 118 aaPredicted RBP13.94□□□□□ -0.18
CLDN11-205ENST00000480067 MPHOSPH8Q99549 860 aa13.94□□□□□ -0.18
CLDN11-205ENST00000480067 UTRNP46939 3433 aa13.94□□□□□ -0.18
CLDN11-205ENST00000480067 CELF1Q92879 486 aaKnown RBP13.93□□□□□ -0.18
CLDN11-205ENST00000480067 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
CLDN11-205ENST00000480067 DDX60Q8IY21 1712 aaKnown RBP13.93□□□□□ -0.18
CLDN11-205ENST00000480067 DALRD3Q5D0E6 543 aaKnown RBP13.92□□□□□ -0.18
CLDN11-205ENST00000480067 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
CLDN11-205ENST00000480067 LDHAL6AQ6ZMR3 332 aa13.92□□□□□ -0.18
CLDN11-205ENST00000480067 SSH3Q8TE77 659 aa13.92□□□□□ -0.18
CLDN11-205ENST00000480067 ZNF594Q96JF6 807 aaPredicted RBP13.92□□□□□ -0.18
CLDN11-205ENST00000480067 TMX4Q9H1E5 349 aaPredicted RBP13.92□□□□□ -0.18
CLDN11-205ENST00000480067 WWC3Q9ULE0 1092 aa13.92□□□□□ -0.18
CLDN11-205ENST00000480067 TNRC6CQ9HCJ0 1690 aaKnown RBP13.92□□□□□ -0.18
CLDN11-205ENST00000480067 SIRT2Q8IXJ6 389 aa13.92□□□□□ -0.18
CLDN11-205ENST00000480067 ANKRD31Q8N7Z5 1873 aa13.91□□□□□ -0.18
CLDN11-205ENST00000480067 PPEF1O14829 653 aaPredicted RBP13.91□□□□□ -0.18
CLDN11-205ENST00000480067 RFX5P48382 616 aaPredicted RBP13.91□□□□□ -0.18
CLDN11-205ENST00000480067 PTPN12Q05209 780 aaKnown RBP13.91□□□□□ -0.18
CLDN11-205ENST00000480067 POLA2Q14181 598 aa13.91□□□□□ -0.18
CLDN11-205ENST00000480067 TMC4Q7Z404 712 aa13.91□□□□□ -0.18
CLDN11-205ENST00000480067 KLHDC4Q8TBB5 520 aa13.91□□□□□ -0.18
CLDN11-205ENST00000480067 CNNM1Q9NRU3 951 aa13.91□□□□□ -0.18
CLDN11-205ENST00000480067 BSDC1Q9NW68 430 aaPredicted RBP13.91□□□□□ -0.18
CLDN11-205ENST00000480067 SURF6O75683 361 aaKnown RBP13.9□□□□□ -0.18
CLDN11-205ENST00000480067 SIL1Q9H173 461 aa13.9□□□□□ -0.18
CLDN11-205ENST00000480067 COPRSQ9NQ92 184 aa13.9□□□□□ -0.18
CLDN11-205ENST00000480067 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
CLDN11-205ENST00000480067 BCS1LQ9Y276 419 aa13.9□□□□□ -0.18
CLDN11-205ENST00000480067 LAMB2P55268 1798 aa13.9□□□□□ -0.18
CLDN11-205ENST00000480067 KIF13BQ9NQT8 1826 aa13.9□□□□□ -0.18
CLDN11-205ENST00000480067 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
CLDN11-205ENST00000480067 ERICH6BQ5W0A0 696 aa13.89□□□□□ -0.19
CLDN11-205ENST00000480067 SP8Q8IXZ3 490 aa13.89□□□□□ -0.19
CLDN11-205ENST00000480067 RWDD1Q9H446 243 aaPredicted RBP13.89□□□□□ -0.19
CLDN11-205ENST00000480067 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
CLDN11-205ENST00000480067 ATP6V0A2Q9Y487 856 aa13.89□□□□□ -0.19
CLDN11-205ENST00000480067 LRP5O75197 1615 aa13.89□□□□□ -0.19
CLDN11-205ENST00000480067 EYA2O00167 538 aa13.88□□□□□ -0.19
CLDN11-205ENST00000480067 C21orf2O43822 256 aa13.88□□□□□ -0.19
CLDN11-205ENST00000480067 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
CLDN11-205ENST00000480067 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
CLDN11-205ENST00000480067 MINPP1Q9UNW1 487 aa13.88□□□□□ -0.19
CLDN11-205ENST00000480067 MYH3P11055 1940 aa13.88□□□□□ -0.19
CLDN11-205ENST00000480067 CIAO1O76071 339 aa13.88□□□□□ -0.19
CLDN11-205ENST00000480067 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
CLDN11-205ENST00000480067 LRRC24Q50LG9 513 aa13.88□□□□□ -0.19
CLDN11-205ENST00000480067 HSP90AB4PQ58FF6 505 aa13.88□□□□□ -0.19
CLDN11-205ENST00000480067 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
CLDN11-205ENST00000480067 PUS3Q9BZE2 481 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms