RNA–Protein interactions for RNA: ENST00000480020.5

HPS1-212, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-212ENST00000480020 CACNA1SQ13698 1873 aa15.79■□□□□ 0.12
HPS1-212ENST00000480020 BBOX1O75936 387 aa15.78■□□□□ 0.12
HPS1-212ENST00000480020 CTSWP56202 376 aa15.78■□□□□ 0.12
HPS1-212ENST00000480020 C9orf131Q5VYM1 1079 aa15.78■□□□□ 0.12
HPS1-212ENST00000480020 TAOK3Q9H2K8 898 aa15.78■□□□□ 0.12
HPS1-212ENST00000480020 COL4A1P02462 1669 aa15.78■□□□□ 0.12
HPS1-212ENST00000480020 KIF16BQ96L93 1317 aa15.77■□□□□ 0.12
HPS1-212ENST00000480020 GRM8O00222 908 aa15.77■□□□□ 0.12
HPS1-212ENST00000480020 BCAR3O75815 825 aa15.77■□□□□ 0.12
HPS1-212ENST00000480020 CCDC152Q4G0S7 254 aa15.77■□□□□ 0.12
HPS1-212ENST00000480020 CC2D2BQ6DHV5 1058 aa15.77■□□□□ 0.12
HPS1-212ENST00000480020 TTLL11Q8NHH1 800 aa15.77■□□□□ 0.12
HPS1-212ENST00000480020 CELF1Q92879 486 aaKnown RBP15.77■□□□□ 0.12
HPS1-212ENST00000480020 SEC31BQ9NQW1 1179 aa15.77■□□□□ 0.12
HPS1-212ENST00000480020 RNF181Q9P0P0 153 aa15.77■□□□□ 0.12
HPS1-212ENST00000480020 ATP6V0A2Q9Y487 856 aa15.77■□□□□ 0.12
HPS1-212ENST00000480020 FER1L6Q2WGJ9 1857 aa15.77■□□□□ 0.11
HPS1-212ENST00000480020 LMNB1P20700 586 aa15.76■□□□□ 0.11
HPS1-212ENST00000480020 FKBP4Q02790 459 aaKnown RBP eCLIP15.76■□□□□ 0.11
HPS1-212ENST00000480020 RTKN2Q8IZC4 609 aa15.76■□□□□ 0.11
HPS1-212ENST00000480020 ARHGAP45Q92619 1136 aa15.76■□□□□ 0.11
HPS1-212ENST00000480020 CCDC85AQ96PX6 553 aaPredicted RBP15.76■□□□□ 0.11
HPS1-212ENST00000480020 API5Q9BZZ5 524 aaKnown RBP15.76■□□□□ 0.11
HPS1-212ENST00000480020 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
HPS1-212ENST00000480020 UTYO14607 1347 aa15.75■□□□□ 0.11
HPS1-212ENST00000480020 SP8Q8IXZ3 490 aa15.75■□□□□ 0.11
HPS1-212ENST00000480020 ZNF784Q8NCA9 323 aaPredicted RBP15.75■□□□□ 0.11
HPS1-212ENST00000480020 CSF1RP07333 972 aa15.74■□□□□ 0.11
HPS1-212ENST00000480020 RPS8P62241 208 aaKnown RBP15.74■□□□□ 0.11
HPS1-212ENST00000480020 FOXO4P98177 505 aa15.74■□□□□ 0.11
HPS1-212ENST00000480020 GRIPAP1Q4V328 841 aa15.74■□□□□ 0.11
HPS1-212ENST00000480020 TMC4Q7Z404 712 aa15.74■□□□□ 0.11
HPS1-212ENST00000480020 PSMD1Q99460 953 aa15.74■□□□□ 0.11
HPS1-212ENST00000480020 GREM2Q9H772 168 aa15.74■□□□□ 0.11
HPS1-212ENST00000480020 C9orf78Q9NZ63 289 aaPredicted RBP15.74■□□□□ 0.11
HPS1-212ENST00000480020 SBF1O95248 1867 aa15.74■□□□□ 0.11
HPS1-212ENST00000480020 TAF1P21675 1872 aa15.74■□□□□ 0.11
HPS1-212ENST00000480020 NBPF7P0C2Y1 421 aaPredicted RBP15.73■□□□□ 0.11
HPS1-212ENST00000480020 CCT4P50991 539 aaKnown RBP15.73■□□□□ 0.11
HPS1-212ENST00000480020 EPHA10Q5JZY3 1008 aa15.73■□□□□ 0.11
HPS1-212ENST00000480020 ZNF277Q9NRM2 450 aaPredicted RBP15.73■□□□□ 0.11
HPS1-212ENST00000480020 IPO8O15397 1037 aaKnown RBP15.72■□□□□ 0.11
HPS1-212ENST00000480020 TRIM27P14373 513 aa15.72■□□□□ 0.11
HPS1-212ENST00000480020 FAM161AQ3B820 660 aa15.72■□□□□ 0.11
HPS1-212ENST00000480020 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
HPS1-212ENST00000480020 KAZALD1Q96I82 304 aa15.72■□□□□ 0.11
HPS1-212ENST00000480020 SUCLG2Q96I99 432 aa15.72■□□□□ 0.11
HPS1-212ENST00000480020 USP44Q9H0E7 712 aa15.72■□□□□ 0.11
HPS1-212ENST00000480020 TNNQ9UQP3 1299 aa15.72■□□□□ 0.11
HPS1-212ENST00000480020 LRRC37AA6NMS7 1700 aa15.71■□□□□ 0.11
HPS1-212ENST00000480020 FRAT1Q92837 279 aaPredicted RBP15.71■□□□□ 0.11
HPS1-212ENST00000480020 CDC5LQ99459 802 aaKnown RBP15.71■□□□□ 0.11
HPS1-212ENST00000480020 RTFDC1Q9BY42 306 aaPredicted RBP15.71■□□□□ 0.11
HPS1-212ENST00000480020 TMX4Q9H1E5 349 aaPredicted RBP15.71■□□□□ 0.11
HPS1-212ENST00000480020 ZC3H4Q9UPT8 1303 aaKnown RBP15.7■□□□□ 0.1
HPS1-212ENST00000480020 MYH3P11055 1940 aa15.7■□□□□ 0.1
HPS1-212ENST00000480020 ITGA6P23229 1130 aa15.7■□□□□ 0.1
HPS1-212ENST00000480020 IARSP41252 1262 aaKnown RBP15.7■□□□□ 0.1
HPS1-212ENST00000480020 ZKSCAN2Q63HK3 967 aa15.7■□□□□ 0.1
HPS1-212ENST00000480020 INTS3Q68E01 1043 aaKnown RBP15.7■□□□□ 0.1
HPS1-212ENST00000480020 ANKRD18AQ8IVF6 992 aa15.7■□□□□ 0.1
HPS1-212ENST00000480020 MPNDQ8N594 471 aa15.7■□□□□ 0.1
HPS1-212ENST00000480020 GPSM2P81274 684 aa15.69■□□□□ 0.1
HPS1-212ENST00000480020 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
HPS1-212ENST00000480020 DPP8Q6V1X1 898 aaPredicted RBP15.69■□□□□ 0.1
HPS1-212ENST00000480020 DUOX1Q9NRD9 1551 aa15.69■□□□□ 0.1
HPS1-212ENST00000480020 RABL6Q3YEC7 729 aaPredicted RBP15.68■□□□□ 0.1
HPS1-212ENST00000480020 ANKRD44Q8N8A2 993 aa15.68■□□□□ 0.1
HPS1-212ENST00000480020 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
HPS1-212ENST00000480020 BICC1Q9H694 974 aaKnown RBP15.68■□□□□ 0.1
HPS1-212ENST00000480020 BSDC1Q9NW68 430 aaPredicted RBP15.68■□□□□ 0.1
HPS1-212ENST00000480020 COL4A5P29400 1685 aa15.67■□□□□ 0.1
HPS1-212ENST00000480020 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
HPS1-212ENST00000480020 ZNF526Q8TF50 670 aaPredicted RBP15.67■□□□□ 0.1
HPS1-212ENST00000480020 CLUAP1Q96AJ1 413 aa15.67■□□□□ 0.1
HPS1-212ENST00000480020 PODXL2Q9NZ53 605 aa15.67■□□□□ 0.1
HPS1-212ENST00000480020 NSFL1CQ9UNZ2 370 aaKnown RBP15.67■□□□□ 0.1
HPS1-212ENST00000480020 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
HPS1-212ENST00000480020 TIAM2Q8IVF5 1701 aa15.67■□□□□ 0.1
HPS1-212ENST00000480020 CCDC88AQ3V6T2 1871 aa15.67■□□□□ 0.1
HPS1-212ENST00000480020 LTBP1Q14766 1721 aa15.66■□□□□ 0.1
HPS1-212ENST00000480020 ANKRD18BA2A2Z9 1011 aa15.66■□□□□ 0.1
HPS1-212ENST00000480020 IGHMBP2P38935 993 aaKnown RBP15.66■□□□□ 0.1
HPS1-212ENST00000480020 IFIT5Q13325 482 aaKnown RBP15.66■□□□□ 0.1
HPS1-212ENST00000480020 MEIS3Q99687 375 aa15.66■□□□□ 0.1
HPS1-212ENST00000480020 VPS33BQ9H267 617 aa15.66■□□□□ 0.1
HPS1-212ENST00000480020 POLLQ9UGP5 575 aa15.66■□□□□ 0.1
HPS1-212ENST00000480020 RCAN3Q9UKA8 241 aa15.66■□□□□ 0.1
HPS1-212ENST00000480020 MINPP1Q9UNW1 487 aa15.66■□□□□ 0.1
HPS1-212ENST00000480020 DICER1Q9UPY3 1922 aaKnown RBP15.66■□□□□ 0.1
HPS1-212ENST00000480020 PPIP5K2O43314 1243 aa15.65■□□□□ 0.1
HPS1-212ENST00000480020 AOC3Q16853 763 aa15.65■□□□□ 0.1
HPS1-212ENST00000480020 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
HPS1-212ENST00000480020 TBC1D16Q8TBP0 767 aa15.65■□□□□ 0.1
HPS1-212ENST00000480020 GPBP1L1Q9HC44 474 aaPredicted RBP15.65■□□□□ 0.1
HPS1-212ENST00000480020 GLTPD2A6NH11 291 aa15.64■□□□□ 0.09
HPS1-212ENST00000480020 FZD9O00144 591 aa15.64■□□□□ 0.09
HPS1-212ENST00000480020 UBTFL1P0CB47 393 aaPredicted RBP15.64■□□□□ 0.09
HPS1-212ENST00000480020 RLBP1P12271 317 aa15.64■□□□□ 0.09
HPS1-212ENST00000480020 KIAA2012Q0VF49 1180 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms