RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 LRFN3Q9BTN0 628 aa11.34□□□□□ -0.59
EFEMP1-211ENST00000480016 R3HDMLQ9H3Y0 253 aa11.34□□□□□ -0.59
EFEMP1-211ENST00000480016 PTPN22Q9Y2R2 807 aa11.34□□□□□ -0.59
EFEMP1-211ENST00000480016 HOXC9P31274 260 aa11.33□□□□□ -0.6
EFEMP1-211ENST00000480016 BCAMP50895 628 aa11.33□□□□□ -0.6
EFEMP1-211ENST00000480016 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
EFEMP1-211ENST00000480016 MAFAQ8NHW3 353 aaPredicted RBP11.33□□□□□ -0.6
EFEMP1-211ENST00000480016 ZNF622Q969S3 477 aaKnown RBP eCLIP11.33□□□□□ -0.6
EFEMP1-211ENST00000480016 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
EFEMP1-211ENST00000480016 MAP3K19Q56UN5 1328 aa11.33□□□□□ -0.6
EFEMP1-211ENST00000480016 CLSPNQ9HAW4 1339 aa11.33□□□□□ -0.6
EFEMP1-211ENST00000480016 BMP8BP34820 402 aa11.32□□□□□ -0.6
EFEMP1-211ENST00000480016 DLK2Q6UY11 383 aa11.32□□□□□ -0.6
EFEMP1-211ENST00000480016 ZNF333Q96JL9 665 aa11.32□□□□□ -0.6
EFEMP1-211ENST00000480016 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
EFEMP1-211ENST00000480016 RTL1A6NKG5 1358 aa11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 FYB1O15117 783 aa11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 EMP3P54852 163 aa11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 FAM109BQ6ICB4 259 aaPredicted RBP11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 GGNBP2Q9H3C7 697 aa11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 ZNF277Q9NRM2 450 aaPredicted RBP11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 CGNL1Q0VF96 1302 aa11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
EFEMP1-211ENST00000480016 AFDNP55196 1824 aaKnown RBP11.3□□□□□ -0.6
EFEMP1-211ENST00000480016 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
EFEMP1-211ENST00000480016 RAPGEF4Q8WZA2 1011 aa11.3□□□□□ -0.6
EFEMP1-211ENST00000480016 GDF15Q99988 308 aa11.3□□□□□ -0.6
EFEMP1-211ENST00000480016 PCGF6Q9BYE7 350 aa11.3□□□□□ -0.6
EFEMP1-211ENST00000480016 GJA3Q9Y6H8 435 aa11.3□□□□□ -0.6
EFEMP1-211ENST00000480016 IRS2Q9Y4H2 1338 aa11.3□□□□□ -0.6
EFEMP1-211ENST00000480016 ITGB4P16144 1822 aa11.3□□□□□ -0.6
EFEMP1-211ENST00000480016 CDC37L1Q7L3B6 337 aa11.29□□□□□ -0.6
EFEMP1-211ENST00000480016 ASAP1Q9ULH1 1129 aa11.29□□□□□ -0.6
EFEMP1-211ENST00000480016 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
EFEMP1-211ENST00000480016 RRS1Q15050 365 aaKnown RBP11.28□□□□□ -0.6
EFEMP1-211ENST00000480016 SLC4A8Q2Y0W8 1093 aa11.28□□□□□ -0.6
EFEMP1-211ENST00000480016 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
EFEMP1-211ENST00000480016 GBA2Q9HCG7 927 aaPredicted RBP11.28□□□□□ -0.6
EFEMP1-211ENST00000480016 NRXN2Q9P2S2 1712 aa11.28□□□□□ -0.6
EFEMP1-211ENST00000480016 SLX4Q8IY92 1834 aa11.28□□□□□ -0.6
EFEMP1-211ENST00000480016 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
EFEMP1-211ENST00000480016 CARMIL3Q8ND23 1372 aa11.28□□□□□ -0.6
EFEMP1-211ENST00000480016 CACNA1SQ13698 1873 aa11.27□□□□□ -0.6
EFEMP1-211ENST00000480016 ZDBF2Q9HCK1 2354 aa11.27□□□□□ -0.6
EFEMP1-211ENST00000480016 SERPINB2P05120 415 aa11.27□□□□□ -0.61
EFEMP1-211ENST00000480016 TATP17735 454 aaPredicted RBP11.27□□□□□ -0.61
EFEMP1-211ENST00000480016 FBLN1P23142 703 aa11.27□□□□□ -0.61
EFEMP1-211ENST00000480016 KCTD2Q14681 263 aa11.27□□□□□ -0.61
EFEMP1-211ENST00000480016 UBE2Q1Q7Z7E8 422 aa11.27□□□□□ -0.61
EFEMP1-211ENST00000480016 C7orf43Q8WVR3 580 aa11.27□□□□□ -0.61
EFEMP1-211ENST00000480016 FAM161BQ96MY7 647 aa11.27□□□□□ -0.61
EFEMP1-211ENST00000480016 CFHR5Q9BXR6 569 aa11.27□□□□□ -0.61
EFEMP1-211ENST00000480016 ATRXP46100 2492 aa11.27□□□□□ -0.61
EFEMP1-211ENST00000480016 RGS20O76081 388 aa11.26□□□□□ -0.61
EFEMP1-211ENST00000480016 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
EFEMP1-211ENST00000480016 NFIXQ14938 502 aa11.26□□□□□ -0.61
EFEMP1-211ENST00000480016 SOGA3Q5TF21 947 aa11.26□□□□□ -0.61
EFEMP1-211ENST00000480016 NBPF6Q5VWK0 638 aa11.26□□□□□ -0.61
EFEMP1-211ENST00000480016 C2orf69Q8N8R5 385 aa11.26□□□□□ -0.61
EFEMP1-211ENST00000480016 NBPF4Q96M43 638 aa11.26□□□□□ -0.61
EFEMP1-211ENST00000480016 HTATIP2Q9BUP3 242 aa11.26□□□□□ -0.61
EFEMP1-211ENST00000480016 FLT4P35916 1363 aa11.26□□□□□ -0.61
EFEMP1-211ENST00000480016 TM4SF4P48230 202 aa11.25□□□□□ -0.61
EFEMP1-211ENST00000480016 FKBP4Q02790 459 aaKnown RBP eCLIP11.25□□□□□ -0.61
EFEMP1-211ENST00000480016 USP48Q86UV5 1035 aa11.25□□□□□ -0.61
EFEMP1-211ENST00000480016 CDX2Q99626 313 aaPredicted RBP11.25□□□□□ -0.61
EFEMP1-211ENST00000480016 ADARB2Q9NS39 739 aaKnown RBP11.25□□□□□ -0.61
EFEMP1-211ENST00000480016 CNTNAP4Q9C0A0 1308 aa11.25□□□□□ -0.61
EFEMP1-211ENST00000480016 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
EFEMP1-211ENST00000480016 HIRAP54198 1017 aaPredicted RBP11.24□□□□□ -0.61
EFEMP1-211ENST00000480016 MAP3K11Q16584 847 aa11.24□□□□□ -0.61
EFEMP1-211ENST00000480016 HSP90AB2PQ58FF8 381 aa11.24□□□□□ -0.61
EFEMP1-211ENST00000480016 RASAL3Q86YV0 1011 aa11.24□□□□□ -0.61
EFEMP1-211ENST00000480016 SHISA4Q96DD7 197 aa11.24□□□□□ -0.61
EFEMP1-211ENST00000480016 POLR3GLQ9BT43 218 aa11.24□□□□□ -0.61
EFEMP1-211ENST00000480016 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.24□□□□□ -0.61
EFEMP1-211ENST00000480016 PCDH11XQ9BZA7 1347 aa11.24□□□□□ -0.61
EFEMP1-211ENST00000480016 PCDH11YQ9BZA8 1340 aa11.24□□□□□ -0.61
EFEMP1-211ENST00000480016 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 EIF4G2P78344 907 aaKnown RBP eCLIP11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 USHBP1Q8N6Y0 703 aa11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 ZC3H15Q8WU90 426 aaKnown RBP11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 CARD14Q9BXL6 1004 aa11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
EFEMP1-211ENST00000480016 CYP27B1O15528 508 aa11.22□□□□□ -0.61
EFEMP1-211ENST00000480016 IARSP41252 1262 aaKnown RBP11.22□□□□□ -0.61
EFEMP1-211ENST00000480016 CCER1Q8TC90 406 aaPredicted RBP11.22□□□□□ -0.61
EFEMP1-211ENST00000480016 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
EFEMP1-211ENST00000480016 ATG3Q9NT62 314 aa11.22□□□□□ -0.61
EFEMP1-211ENST00000480016 KMT2BQ9UMN6 2715 aaPredicted RBP11.21□□□□□ -0.61
EFEMP1-211ENST00000480016 MYCP01106 439 aaPredicted RBP11.21□□□□□ -0.61
EFEMP1-211ENST00000480016 EIF6P56537 245 aaKnown RBP11.21□□□□□ -0.61
EFEMP1-211ENST00000480016 TDHQ8IZJ6 230 aa11.21□□□□□ -0.61
EFEMP1-211ENST00000480016 CNKSR1Q969H4 720 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms