RNA–Protein interactions for RNA: ENST00000479896.1

PTPRE-208, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 5,736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-208ENST00000479896 STX1AQ16623 288 aa14.25□□□□□ -0.13
PTPRE-208ENST00000479896 NOS1P29475 1434 aa14.25□□□□□ -0.13
PTPRE-208ENST00000479896 FSD2A1L4K1 749 aa14.24□□□□□ -0.13
PTPRE-208ENST00000479896 ADGRF5Q8IZF2 1346 aa14.24□□□□□ -0.13
PTPRE-208ENST00000479896 VEZTQ9HBM0 779 aa14.24□□□□□ -0.13
PTPRE-208ENST00000479896 NOP2P46087 812 aaKnown RBP14.24□□□□□ -0.13
PTPRE-208ENST00000479896 PRPF4BQ13523 1007 aaKnown RBP14.24□□□□□ -0.13
PTPRE-208ENST00000479896 DHX37Q8IY37 1157 aaKnown RBP14.24□□□□□ -0.13
PTPRE-208ENST00000479896 EYA3Q99504 573 aa14.24□□□□□ -0.13
PTPRE-208ENST00000479896 PI4KAP2A4QPH2 592 aa14.24□□□□□ -0.13
PTPRE-208ENST00000479896 GJB2P29033 226 aa14.24□□□□□ -0.13
PTPRE-208ENST00000479896 PLS1Q14651 629 aa14.24□□□□□ -0.13
PTPRE-208ENST00000479896 NAA16Q6N069 864 aaPredicted RBP14.24□□□□□ -0.13
PTPRE-208ENST00000479896 PI4KAP1Q8N8J0 262 aa14.24□□□□□ -0.13
PTPRE-208ENST00000479896 KIF4AO95239 1232 aa14.24□□□□□ -0.13
PTPRE-208ENST00000479896 NIP7Q9Y221 180 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPRE-208ENST00000479896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPRE-208ENST00000479896 KIF18AQ8NI77 898 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 TTC12Q9H892 705 aaPredicted RBP14.23□□□□□ -0.13
PTPRE-208ENST00000479896 MMRN2Q9H8L6 949 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 TFCP2L1Q9NZI6 479 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 ABCC5O15440 1437 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 POTEB2H3BUK9 544 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 URI1O94763 535 aaPredicted RBP14.23□□□□□ -0.13
PTPRE-208ENST00000479896 ATP2B3Q16720 1220 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 SREK1Q8WXA9 508 aaKnown RBP14.23□□□□□ -0.13
PTPRE-208ENST00000479896 PLVAPQ9BX97 442 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 BCCIPQ9P287 314 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPRE-208ENST00000479896 NEMFO60524 1076 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 PLCG2P16885 1265 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 LRSAM1Q6UWE0 723 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 IKBKGQ9Y6K9 419 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 ANKRD36BQ8N2N9 1353 aa14.23□□□□□ -0.13
PTPRE-208ENST00000479896 SCAF11Q99590 1463 aaKnown RBP14.22□□□□□ -0.13
PTPRE-208ENST00000479896 DHX29Q7Z478 1369 aaKnown RBP14.22□□□□□ -0.13
PTPRE-208ENST00000479896 GSDMDP57764 484 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 HEATR3Q7Z4Q2 680 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 PDCL2Q8N4E4 241 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 RTCBQ9Y3I0 505 aaKnown RBP14.22□□□□□ -0.13
PTPRE-208ENST00000479896 CCDC102BQ68D86 513 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 TRIM47Q96LD4 638 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 PRXQ9BXM0 1461 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 PLCD3Q8N3E9 789 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 CEP63Q96MT8 703 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 IMPG2Q9BZV3 1241 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 TPTE2Q6XPS3 522 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 C6orf50Q9HD87 102 aa14.22□□□□□ -0.13
PTPRE-208ENST00000479896 TNNI2P48788 182 aa14.21□□□□□ -0.13
PTPRE-208ENST00000479896 HLTFQ14527 1009 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTPRE-208ENST00000479896 SPECC1Q5M775 1068 aa14.21□□□□□ -0.13
PTPRE-208ENST00000479896 FANCAO15360 1455 aa14.21□□□□□ -0.13
PTPRE-208ENST00000479896 ZC3H12CQ9C0D7 883 aaKnown RBP14.21□□□□□ -0.13
PTPRE-208ENST00000479896 STAT6P42226 847 aa14.21□□□□□ -0.14
PTPRE-208ENST00000479896 GOLGA6L9A6NEM1 432 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 ZBTB43O43298 467 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 RTN1Q16799 776 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 EHBP1Q8NDI1 1231 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 MBIPQ9NS73 344 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 MAGEB6P1A0A0J9YX57 407 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 NAPAP54920 295 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 RBM26Q5T8P6 1007 aaKnown RBP14.2□□□□□ -0.14
PTPRE-208ENST00000479896 BBXQ8WY36 941 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-208ENST00000479896 ANKRD2Q9GZV1 360 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 C14orf93Q9H972 538 aaKnown RBP14.2□□□□□ -0.14
PTPRE-208ENST00000479896 IL27Q8NEV9 243 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 XAGE3Q8WTP9 111 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 TAF12Q16514 161 aa14.2□□□□□ -0.14
PTPRE-208ENST00000479896 APBB1IPQ7Z5R6 666 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-208ENST00000479896 TEX14Q8IWB6 1497 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 SPDYE3A6NKU9 549 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 IL2RBP14784 551 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 DZIP3Q86Y13 1208 aaKnown RBP14.19□□□□□ -0.14
PTPRE-208ENST00000479896 RAB11FIP4Q86YS3 637 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 PPP1R14CQ8TAE6 165 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 JARID2Q92833 1246 aaPredicted RBP14.19□□□□□ -0.14
PTPRE-208ENST00000479896 PANK2Q9BZ23 570 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 BIN2Q9UBW5 565 aaPredicted RBP14.19□□□□□ -0.14
PTPRE-208ENST00000479896 CALM1P0DP23 149 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 CALM2P0DP24 149 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 CALM3P0DP25 149 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
PTPRE-208ENST00000479896 AKAP4Q5JQC9 854 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 TMC6Q7Z403 805 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 RBM17Q96I25 401 aaKnown RBP14.19□□□□□ -0.14
PTPRE-208ENST00000479896 ZSCAN16Q9H4T2 348 aaPredicted RBP14.19□□□□□ -0.14
PTPRE-208ENST00000479896 RTL9Q8NET4 1388 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 IL16Q14005 1332 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 BIN1O00499 593 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 GNAT2P19087 354 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 IL15P40933 162 aaPredicted RBP14.19□□□□□ -0.14
PTPRE-208ENST00000479896 MICALCLQ6ZW33 695 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 RRAGBQ5VZM2 374 aa14.19□□□□□ -0.14
PTPRE-208ENST00000479896 RRP36Q96EU6 259 aaKnown RBP14.19□□□□□ -0.14
PTPRE-208ENST00000479896 KIAA0753Q2KHM9 967 aa14.18□□□□□ -0.14
PTPRE-208ENST00000479896 TCHPQ9BT92 498 aa14.18□□□□□ -0.14
PTPRE-208ENST00000479896 CHPF2Q9P2E5 772 aa14.18□□□□□ -0.14
PTPRE-208ENST00000479896 RBM27Q9P2N5 1060 aaKnown RBP14.18□□□□□ -0.14
PTPRE-208ENST00000479896 TTC16Q8NEE8 873 aa14.18□□□□□ -0.14
PTPRE-208ENST00000479896 SIRT1Q96EB6 747 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms