RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
GPNMB-211ENST00000479625 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
GPNMB-211ENST00000479625 TCERG1O14776 1098 aaKnown RBP13.04□□□□□ -0.32
GPNMB-211ENST00000479625 CELF2O95319 508 aaKnown RBP13.04□□□□□ -0.32
GPNMB-211ENST00000479625 GTF2E1P29083 439 aaPredicted RBP13.04□□□□□ -0.32
GPNMB-211ENST00000479625 MAP2K2P36507 400 aa13.04□□□□□ -0.32
GPNMB-211ENST00000479625 DGKZQ13574 1117 aa13.04□□□□□ -0.32
GPNMB-211ENST00000479625 CRY2Q49AN0 593 aa13.04□□□□□ -0.32
GPNMB-211ENST00000479625 SAPCD2Q86UD0 394 aa13.04□□□□□ -0.32
GPNMB-211ENST00000479625 AKAP11Q9UKA4 1901 aa13.03□□□□□ -0.32
GPNMB-211ENST00000479625 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
GPNMB-211ENST00000479625 C7P10643 843 aa13.03□□□□□ -0.32
GPNMB-211ENST00000479625 PRKAR2BP31323 418 aa13.03□□□□□ -0.32
GPNMB-211ENST00000479625 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
GPNMB-211ENST00000479625 MCM10Q7L590 875 aa13.03□□□□□ -0.32
GPNMB-211ENST00000479625 GLIS2Q9BZE0 524 aaPredicted RBP13.03□□□□□ -0.32
GPNMB-211ENST00000479625 ZNF408Q9H9D4 720 aa13.03□□□□□ -0.32
GPNMB-211ENST00000479625 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
GPNMB-211ENST00000479625 POLR2AP24928 1970 aaKnown RBP13.02□□□□□ -0.32
GPNMB-211ENST00000479625 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
GPNMB-211ENST00000479625 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.33
GPNMB-211ENST00000479625 AOC3Q16853 763 aa13.02□□□□□ -0.33
GPNMB-211ENST00000479625 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
GPNMB-211ENST00000479625 RPGRQ92834 1020 aaKnown RBP13.02□□□□□ -0.33
GPNMB-211ENST00000479625 ZIC5Q96T25 663 aa13.02□□□□□ -0.33
GPNMB-211ENST00000479625 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
GPNMB-211ENST00000479625 ADARB2Q9NS39 739 aaKnown RBP13.02□□□□□ -0.33
GPNMB-211ENST00000479625 GPRC5DQ9NZD1 345 aa13.02□□□□□ -0.33
GPNMB-211ENST00000479625 UBN2Q6ZU65 1347 aa13.02□□□□□ -0.33
GPNMB-211ENST00000479625 PER1O15534 1290 aaPredicted RBP13.01□□□□□ -0.33
GPNMB-211ENST00000479625 PPIP5K2O43314 1243 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 GPTP24298 496 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 C3orf67Q6ZVT6 689 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 NPC1L1Q9UHC9 1359 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
GPNMB-211ENST00000479625 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
GPNMB-211ENST00000479625 RGL2O15211 777 aa13□□□□□ -0.33
GPNMB-211ENST00000479625 CA12O43570 354 aa13□□□□□ -0.33
GPNMB-211ENST00000479625 GMPSP49915 693 aaPredicted RBP13□□□□□ -0.33
GPNMB-211ENST00000479625 SOX10P56693 466 aa13□□□□□ -0.33
GPNMB-211ENST00000479625 TMEM106CQ9BVX2 250 aa13□□□□□ -0.33
GPNMB-211ENST00000479625 NYXQ9GZU5 481 aa13□□□□□ -0.33
GPNMB-211ENST00000479625 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
GPNMB-211ENST00000479625 IBTKQ9P2D0 1353 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-211ENST00000479625 HOXA10P31260 410 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-211ENST00000479625 CXCL9Q07325 125 aa12.99□□□□□ -0.33
GPNMB-211ENST00000479625 DLK2Q6UY11 383 aa12.99□□□□□ -0.33
GPNMB-211ENST00000479625 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
GPNMB-211ENST00000479625 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
GPNMB-211ENST00000479625 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
GPNMB-211ENST00000479625 TTLL7Q6ZT98 887 aa12.98□□□□□ -0.33
GPNMB-211ENST00000479625 TRPM4Q8TD43 1214 aa12.98□□□□□ -0.33
GPNMB-211ENST00000479625 HHIPL1Q96JK4 782 aa12.98□□□□□ -0.33
GPNMB-211ENST00000479625 NTSR2O95665 410 aa12.97□□□□□ -0.33
GPNMB-211ENST00000479625 HIRAP54198 1017 aaPredicted RBP12.97□□□□□ -0.33
GPNMB-211ENST00000479625 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
GPNMB-211ENST00000479625 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
GPNMB-211ENST00000479625 ZBTB3Q9H5J0 574 aa12.97□□□□□ -0.33
GPNMB-211ENST00000479625 MIS18AQ9NYP9 233 aa12.97□□□□□ -0.33
GPNMB-211ENST00000479625 ABCC4O15439 1325 aa12.96□□□□□ -0.33
GPNMB-211ENST00000479625 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
GPNMB-211ENST00000479625 CRAMP1Q96RY5 1269 aa12.96□□□□□ -0.33
GPNMB-211ENST00000479625 COL4A1P02462 1669 aa12.96□□□□□ -0.34
GPNMB-211ENST00000479625 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 RAD17O75943 681 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 MYL6BP14649 208 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 HUNKP57058 714 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
GPNMB-211ENST00000479625 NOGQ13253 232 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 KIF6Q6ZMV9 814 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 PCGF6Q9BYE7 350 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 PGAP2Q9UHJ9 254 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
GPNMB-211ENST00000479625 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
GPNMB-211ENST00000479625 CDHR2Q9BYE9 1310 aa12.94□□□□□ -0.34
GPNMB-211ENST00000479625 ERVV-1B6SEH8 477 aa12.94□□□□□ -0.34
GPNMB-211ENST00000479625 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
GPNMB-211ENST00000479625 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
GPNMB-211ENST00000479625 ATP6V0A2Q9Y487 856 aa12.94□□□□□ -0.34
GPNMB-211ENST00000479625 SCN9AQ15858 1988 aa12.94□□□□□ -0.34
GPNMB-211ENST00000479625 YDJCA8MPS7 323 aa12.93□□□□□ -0.34
GPNMB-211ENST00000479625 FAM155AB1AL88 458 aaPredicted RBP12.93□□□□□ -0.34
GPNMB-211ENST00000479625 CDC37L1Q7L3B6 337 aa12.93□□□□□ -0.34
GPNMB-211ENST00000479625 USP48Q86UV5 1035 aa12.93□□□□□ -0.34
GPNMB-211ENST00000479625 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
GPNMB-211ENST00000479625 SEC24BO95487 1268 aa12.92□□□□□ -0.34
GPNMB-211ENST00000479625 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
GPNMB-211ENST00000479625 ZC3H15Q8WU90 426 aaKnown RBP12.92□□□□□ -0.34
GPNMB-211ENST00000479625 RTFDC1Q9BY42 306 aaPredicted RBP12.92□□□□□ -0.34
GPNMB-211ENST00000479625 PSME4Q14997 1843 aa12.92□□□□□ -0.34
GPNMB-211ENST00000479625 POTEFA5A3E0 1075 aa12.91□□□□□ -0.34
GPNMB-211ENST00000479625 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
GPNMB-211ENST00000479625 EGFRP00533 1210 aa12.91□□□□□ -0.34
GPNMB-211ENST00000479625 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms