RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 PTPN12Q05209 780 aaKnown RBP29.28■■■□□ 2.28
SYNGAP1-206ENST00000479510 HCLS1P14317 486 aaPredicted RBP29.27■■■□□ 2.28
SYNGAP1-206ENST00000479510 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.27■■■□□ 2.28
SYNGAP1-206ENST00000479510 KDM4AO75164 1064 aa29.27■■■□□ 2.28
SYNGAP1-206ENST00000479510 TOB2Q14106 344 aaPredicted RBP29.27■■■□□ 2.28
SYNGAP1-206ENST00000479510 SCAND2PQ9GZW5 306 aaPredicted RBP29.27■■■□□ 2.28
SYNGAP1-206ENST00000479510 DBNLQ9UJU6 430 aaKnown RBP29.27■■■□□ 2.28
SYNGAP1-206ENST00000479510 U3KPZ7 1027 aaPredicted RBP29.27■■■□□ 2.28
SYNGAP1-206ENST00000479510 KLHDC4Q8TBB5 520 aa29.26■■■□□ 2.27
SYNGAP1-206ENST00000479510 USP25Q9UHP3 1055 aa29.26■■■□□ 2.27
SYNGAP1-206ENST00000479510 R3HCC1Q9Y3T6 440 aaKnown RBP29.26■■■□□ 2.27
SYNGAP1-206ENST00000479510 PKD1L3Q7Z443 1732 aa29.26■■■□□ 2.27
SYNGAP1-206ENST00000479510 ZNF589Q86UQ0 364 aaPredicted RBP29.25■■■□□ 2.27
SYNGAP1-206ENST00000479510 ADCY5O95622 1261 aa29.25■■■□□ 2.27
SYNGAP1-206ENST00000479510 DCCP43146 1447 aa29.25■■■□□ 2.27
SYNGAP1-206ENST00000479510 HAUS7Q99871 368 aa29.24■■■□□ 2.27
SYNGAP1-206ENST00000479510 CCDC192P0DO97 292 aa29.24■■■□□ 2.27
SYNGAP1-206ENST00000479510 PLBD2Q8NHP8 589 aa29.23■■■□□ 2.27
SYNGAP1-206ENST00000479510 DDX54Q8TDD1 881 aaKnown RBP29.23■■■□□ 2.27
SYNGAP1-206ENST00000479510 USP16Q9Y5T5 823 aa29.23■■■□□ 2.27
SYNGAP1-206ENST00000479510 TFCP2Q12800 502 aa29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 CDC37L1Q7L3B6 337 aa29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 ARFGEF2Q9Y6D5 1785 aa29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 AFDNP55196 1824 aaKnown RBP29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 LAMB4A4D0S4 1761 aa29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 TPM3P06753 285 aa29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 GIMAP6Q6P9H5 292 aa29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 SASS6Q6UVJ0 657 aa29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 TTC6Q86TZ1 520 aa29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 PARP4Q9UKK3 1724 aaKnown RBP29.22■■■□□ 2.27
SYNGAP1-206ENST00000479510 CASP7P55210 303 aa29.21■■■□□ 2.27
SYNGAP1-206ENST00000479510 GLIPR1L2Q4G1C9 344 aa29.21■■■□□ 2.27
SYNGAP1-206ENST00000479510 UBE3BQ7Z3V4 1068 aa29.21■■■□□ 2.27
SYNGAP1-206ENST00000479510 NEK1Q96PY6 1258 aa29.21■■■□□ 2.27
SYNGAP1-206ENST00000479510 TMEM94Q12767 1356 aa29.2■■■□□ 2.27
SYNGAP1-206ENST00000479510 MCMDC2Q4G0Z9 681 aa29.2■■■□□ 2.26
SYNGAP1-206ENST00000479510 PIBF1Q8WXW3 757 aa29.2■■■□□ 2.26
SYNGAP1-206ENST00000479510 CYP27B1O15528 508 aa29.19■■■□□ 2.26
SYNGAP1-206ENST00000479510 GTF3C6Q969F1 213 aa29.19■■■□□ 2.26
SYNGAP1-206ENST00000479510 PDCL3Q9H2J4 239 aa29.19■■■□□ 2.26
SYNGAP1-206ENST00000479510 GPR108Q9NPR9 543 aa29.19■■■□□ 2.26
SYNGAP1-206ENST00000479510 SH3TC1Q8TE82 1336 aa29.19■■■□□ 2.26
SYNGAP1-206ENST00000479510 A0A087WZG4 1122 aa29.18■■■□□ 2.26
SYNGAP1-206ENST00000479510 HMGB1P09429 215 aaKnown RBP29.18■■■□□ 2.26
SYNGAP1-206ENST00000479510 CSB-PGBD3P0DP91 1061 aa29.18■■■□□ 2.26
SYNGAP1-206ENST00000479510 MAP3K11Q16584 847 aa29.18■■■□□ 2.26
SYNGAP1-206ENST00000479510 TAF6LQ9Y6J9 622 aa29.18■■■□□ 2.26
SYNGAP1-206ENST00000479510 ZNF609O15014 1411 aa29.18■■■□□ 2.26
SYNGAP1-206ENST00000479510 ATF3P18847 181 aa29.17■■■□□ 2.26
SYNGAP1-206ENST00000479510 NUP62CLQ9H1M0 184 aa29.17■■■□□ 2.26
SYNGAP1-206ENST00000479510 GLI3P10071 1580 aa29.17■■■□□ 2.26
SYNGAP1-206ENST00000479510 CABP4P57796 275 aa29.17■■■□□ 2.26
SYNGAP1-206ENST00000479510 MAP7D2Q96T17 732 aa29.17■■■□□ 2.26
SYNGAP1-206ENST00000479510 DDX19AQ9NUU7 478 aaKnown RBP29.17■■■□□ 2.26
SYNGAP1-206ENST00000479510 PALLDQ8WX93 1383 aa29.17■■■□□ 2.26
SYNGAP1-206ENST00000479510 DYNC1I1O14576 645 aa29.16■■■□□ 2.26
SYNGAP1-206ENST00000479510 KBTBD3Q8NAB2 608 aa29.16■■■□□ 2.26
SYNGAP1-206ENST00000479510 LLPHQ9BRT6 129 aaKnown RBP29.16■■■□□ 2.26
SYNGAP1-206ENST00000479510 CPDO75976 1380 aa29.16■■■□□ 2.26
SYNGAP1-206ENST00000479510 COL9A3Q14050 684 aaPredicted RBP29.16■■■□□ 2.26
SYNGAP1-206ENST00000479510 EDC3Q96F86 508 aaKnown RBP29.16■■■□□ 2.26
SYNGAP1-206ENST00000479510 TNS3Q68CZ2 1445 aa29.15■■■□□ 2.26
SYNGAP1-206ENST00000479510 H7C1W4 665 aa29.15■■■□□ 2.26
SYNGAP1-206ENST00000479510 PRKCSHP14314 528 aaPredicted RBP29.15■■■□□ 2.26
SYNGAP1-206ENST00000479510 FAM200AQ8TCP9 573 aa29.15■■■□□ 2.26
SYNGAP1-206ENST00000479510 DBNDD2Q9BQY9 259 aa29.15■■■□□ 2.26
SYNGAP1-206ENST00000479510 SPATA32Q96LK8 384 aa29.14■■■□□ 2.26
SYNGAP1-206ENST00000479510 TCEANC2Q96MN5 208 aa29.14■■■□□ 2.26
SYNGAP1-206ENST00000479510 HELLSQ9NRZ9 838 aa29.14■■■□□ 2.26
SYNGAP1-206ENST00000479510 UQCRHLA0A096LP55 91 aa29.14■■■□□ 2.25
SYNGAP1-206ENST00000479510 UQCRHP07919 91 aa29.14■■■□□ 2.25
SYNGAP1-206ENST00000479510 RBM43Q6ZSC3 357 aaKnown RBP29.14■■■□□ 2.25
SYNGAP1-206ENST00000479510 FERMT3Q86UX7 667 aa29.14■■■□□ 2.25
SYNGAP1-206ENST00000479510 ZSCAN16Q9H4T2 348 aaPredicted RBP29.14■■■□□ 2.25
SYNGAP1-206ENST00000479510 GOLGA6L4A6NEF3 574 aa29.13■■■□□ 2.25
SYNGAP1-206ENST00000479510 SPTLC3Q9NUV7 552 aa29.13■■■□□ 2.25
SYNGAP1-206ENST00000479510 LEO1Q8WVC0 666 aaPredicted RBP29.13■■■□□ 2.25
SYNGAP1-206ENST00000479510 DNAJC2Q99543 621 aaKnown RBP29.12■■■□□ 2.25
SYNGAP1-206ENST00000479510 GOLGA6L6A8MZA4 724 aa29.11■■■□□ 2.25
SYNGAP1-206ENST00000479510 FOXO4P98177 505 aa29.11■■■□□ 2.25
SYNGAP1-206ENST00000479510 DSCC1Q9BVC3 393 aa29.11■■■□□ 2.25
SYNGAP1-206ENST00000479510 CYP21A2P08686 494 aa29.11■■■□□ 2.25
SYNGAP1-206ENST00000479510 NOLC1Q14978 699 aaKnown RBP eCLIP29.11■■■□□ 2.25
SYNGAP1-206ENST00000479510 LMBR1LQ6UX01 489 aa29.11■■■□□ 2.25
SYNGAP1-206ENST00000479510 Q6ZUG5 572 aa29.11■■■□□ 2.25
SYNGAP1-206ENST00000479510 ATP5J2-PTCD1G3V325 749 aa29.1■■■□□ 2.25
SYNGAP1-206ENST00000479510 PTCD1O75127 700 aaKnown RBP29.1■■■□□ 2.25
SYNGAP1-206ENST00000479510 LIG1P18858 919 aa29.1■■■□□ 2.25
SYNGAP1-206ENST00000479510 TPRNQ4KMQ1 711 aa29.1■■■□□ 2.25
SYNGAP1-206ENST00000479510 MTERF4Q7Z6M4 381 aaKnown RBP29.1■■■□□ 2.25
SYNGAP1-206ENST00000479510 SMARCC2Q8TAQ2 1214 aa29.1■■■□□ 2.25
SYNGAP1-206ENST00000479510 CHMP4CQ96CF2 233 aa29.1■■■□□ 2.25
SYNGAP1-206ENST00000479510 PRIMPOLQ96LW4 560 aa29.1■■■□□ 2.25
SYNGAP1-206ENST00000479510 IL15P40933 162 aaPredicted RBP29.09■■■□□ 2.25
SYNGAP1-206ENST00000479510 TYRO3Q06418 890 aa29.09■■■□□ 2.25
SYNGAP1-206ENST00000479510 RESTQ13127 1097 aa29.09■■■□□ 2.25
SYNGAP1-206ENST00000479510 TNMDQ9H2S6 317 aa29.09■■■□□ 2.25
SYNGAP1-206ENST00000479510 CLSTN2Q9H4D0 955 aa29.09■■■□□ 2.25
SYNGAP1-206ENST00000479510 ATG3Q9NT62 314 aa29.09■■■□□ 2.25
SYNGAP1-206ENST00000479510 PFKFB2O60825 505 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms