RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 CCDC27Q2M243 656 aa11.65□□□□□ -0.54
CMTM1-208ENST00000479381 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
CMTM1-208ENST00000479381 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
CMTM1-208ENST00000479381 PHAXQ9H814 394 aaKnown RBP11.65□□□□□ -0.54
CMTM1-208ENST00000479381 ZNF277Q9NRM2 450 aaPredicted RBP11.65□□□□□ -0.54
CMTM1-208ENST00000479381 RNF123Q5XPI4 1314 aa11.64□□□□□ -0.55
CMTM1-208ENST00000479381 ZC3H4Q9UPT8 1303 aaKnown RBP11.64□□□□□ -0.55
CMTM1-208ENST00000479381 FKBP4Q02790 459 aaKnown RBP eCLIP11.64□□□□□ -0.55
CMTM1-208ENST00000479381 OLFM4Q6UX06 510 aa11.64□□□□□ -0.55
CMTM1-208ENST00000479381 JDP2Q8WYK2 163 aa11.64□□□□□ -0.55
CMTM1-208ENST00000479381 MYH16Q9H6N6 1097 aa11.64□□□□□ -0.55
CMTM1-208ENST00000479381 FER1L6Q2WGJ9 1857 aa11.63□□□□□ -0.55
CMTM1-208ENST00000479381 KIF3CO14782 793 aa11.63□□□□□ -0.55
CMTM1-208ENST00000479381 MAP3K13O43283 966 aa11.63□□□□□ -0.55
CMTM1-208ENST00000479381 PYGBP11216 843 aa11.63□□□□□ -0.55
CMTM1-208ENST00000479381 HSP90B1P14625 803 aaKnown RBP11.63□□□□□ -0.55
CMTM1-208ENST00000479381 LRP10Q7Z4F1 713 aa11.63□□□□□ -0.55
CMTM1-208ENST00000479381 SYNE4Q8N205 404 aa11.63□□□□□ -0.55
CMTM1-208ENST00000479381 TSPYL6Q8N831 410 aa11.63□□□□□ -0.55
CMTM1-208ENST00000479381 FAM89AQ96GI7 184 aa11.63□□□□□ -0.55
CMTM1-208ENST00000479381 PCDHB13Q9Y5F0 798 aa11.63□□□□□ -0.55
CMTM1-208ENST00000479381 IL16Q14005 1332 aa11.62□□□□□ -0.55
CMTM1-208ENST00000479381 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
CMTM1-208ENST00000479381 GLTPD2A6NH11 291 aa11.62□□□□□ -0.55
CMTM1-208ENST00000479381 TOMM70O94826 608 aa11.62□□□□□ -0.55
CMTM1-208ENST00000479381 IARSP41252 1262 aaKnown RBP11.62□□□□□ -0.55
CMTM1-208ENST00000479381 FKBP5Q13451 457 aaPredicted RBP11.62□□□□□ -0.55
CMTM1-208ENST00000479381 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
CMTM1-208ENST00000479381 WDR63Q8IWG1 891 aa11.62□□□□□ -0.55
CMTM1-208ENST00000479381 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
CMTM1-208ENST00000479381 MAP3K2Q9Y2U5 619 aa11.62□□□□□ -0.55
CMTM1-208ENST00000479381 ABCC4O15439 1325 aa11.61□□□□□ -0.55
CMTM1-208ENST00000479381 LTBP3Q9NS15 1303 aa11.61□□□□□ -0.55
CMTM1-208ENST00000479381 DICER1Q9UPY3 1922 aaKnown RBP11.61□□□□□ -0.55
CMTM1-208ENST00000479381 KLRG2A4D1S0 409 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-208ENST00000479381 IRS4O14654 1257 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-208ENST00000479381 VEGFAP15692 232 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-208ENST00000479381 EIF6P56537 245 aaKnown RBP11.61□□□□□ -0.55
CMTM1-208ENST00000479381 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
CMTM1-208ENST00000479381 CRY2Q49AN0 593 aa11.61□□□□□ -0.55
CMTM1-208ENST00000479381 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
CMTM1-208ENST00000479381 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-208ENST00000479381 CRAMP1Q96RY5 1269 aa11.61□□□□□ -0.55
CMTM1-208ENST00000479381 CWC25Q9NXE8 425 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-208ENST00000479381 GJA3Q9Y6H8 435 aa11.61□□□□□ -0.55
CMTM1-208ENST00000479381 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
CMTM1-208ENST00000479381 PPIP5K2O43314 1243 aa11.6□□□□□ -0.55
CMTM1-208ENST00000479381 GRAPQ13588 217 aa11.6□□□□□ -0.55
CMTM1-208ENST00000479381 DPP8Q6V1X1 898 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-208ENST00000479381 NIM1KQ8IY84 436 aa11.6□□□□□ -0.55
CMTM1-208ENST00000479381 SUPT20HQ8NEM7 779 aa11.6□□□□□ -0.55
CMTM1-208ENST00000479381 GRAPLQ8TC17 118 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-208ENST00000479381 ISCA1Q9BUE6 129 aa11.6□□□□□ -0.55
CMTM1-208ENST00000479381 LAMB2P55268 1798 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 PI4KAP2A4QPH2 592 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 G3V3G9 751 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 DDNO94850 711 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-208ENST00000479381 HSPA6P17066 643 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-208ENST00000479381 HOXA10P31260 410 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-208ENST00000479381 PRELPP51888 382 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 GRIPAP1Q4V328 841 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 EAPPQ56P03 285 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-208ENST00000479381 SLC10A5Q5PT55 438 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 KSR2Q6VAB6 950 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 MPNDQ8N594 471 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 PI4KAP1Q8N8J0 262 aa11.59□□□□□ -0.55
CMTM1-208ENST00000479381 JARID2Q92833 1246 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-208ENST00000479381 METTL22Q9BUU2 404 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-208ENST00000479381 IQCA1LA6NCM1 817 aa11.58□□□□□ -0.56
CMTM1-208ENST00000479381 BBOX1O75936 387 aa11.58□□□□□ -0.56
CMTM1-208ENST00000479381 FLIIQ13045 1269 aa11.58□□□□□ -0.56
CMTM1-208ENST00000479381 ZBTB38Q8NAP3 1195 aaPredicted RBP11.58□□□□□ -0.56
CMTM1-208ENST00000479381 CCDC191Q8NCU4 936 aa11.58□□□□□ -0.56
CMTM1-208ENST00000479381 SMC1BQ8NDV3 1235 aa11.58□□□□□ -0.56
CMTM1-208ENST00000479381 RBM46Q8TBY0 533 aaKnown RBP11.58□□□□□ -0.56
CMTM1-208ENST00000479381 C6orf229H3BNL8 230 aa11.57□□□□□ -0.56
CMTM1-208ENST00000479381 AOC3Q16853 763 aa11.57□□□□□ -0.56
CMTM1-208ENST00000479381 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
CMTM1-208ENST00000479381 C7orf43Q8WVR3 580 aa11.57□□□□□ -0.56
CMTM1-208ENST00000479381 PSMD1Q99460 953 aa11.57□□□□□ -0.56
CMTM1-208ENST00000479381 NSFL1CQ9UNZ2 370 aaKnown RBP11.57□□□□□ -0.56
CMTM1-208ENST00000479381 CHMP3Q9Y3E7 222 aa11.57□□□□□ -0.56
CMTM1-208ENST00000479381 ATP6V0A2Q9Y487 856 aa11.57□□□□□ -0.56
CMTM1-208ENST00000479381 DDX60Q8IY21 1712 aaKnown RBP11.57□□□□□ -0.56
CMTM1-208ENST00000479381 PDE8AO60658 829 aa11.56□□□□□ -0.56
CMTM1-208ENST00000479381 CWF19L2Q2TBE0 894 aaKnown RBP11.56□□□□□ -0.56
CMTM1-208ENST00000479381 G2E3Q7L622 706 aa11.56□□□□□ -0.56
CMTM1-208ENST00000479381 TMC4Q7Z404 712 aa11.56□□□□□ -0.56
CMTM1-208ENST00000479381 ZNF541Q9H0D2 1346 aa11.56□□□□□ -0.56
CMTM1-208ENST00000479381 TAF1P21675 1872 aa11.55□□□□□ -0.56
CMTM1-208ENST00000479381 PCCAP05165 728 aaPredicted RBP11.55□□□□□ -0.56
CMTM1-208ENST00000479381 APLP1P51693 650 aa11.55□□□□□ -0.56
CMTM1-208ENST00000479381 FSTL1Q12841 308 aa11.55□□□□□ -0.56
CMTM1-208ENST00000479381 SLC4A10Q6U841 1118 aa11.55□□□□□ -0.56
CMTM1-208ENST00000479381 SP8Q8IXZ3 490 aa11.55□□□□□ -0.56
CMTM1-208ENST00000479381 DNAAF4Q8WXU2 420 aa11.55□□□□□ -0.56
CMTM1-208ENST00000479381 CELF1Q92879 486 aaKnown RBP11.55□□□□□ -0.56
CMTM1-208ENST00000479381 BCL2L13Q9BXK5 485 aa11.55□□□□□ -0.56
CMTM1-208ENST00000479381 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms