RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 CLUAP1Q96AJ1 413 aa31.52■■■□□ 2.64
PERM1-203ENST00000479361 C21orf2O43822 256 aa31.51■■■□□ 2.63
PERM1-203ENST00000479361 BBOX1O75936 387 aa31.51■■■□□ 2.63
PERM1-203ENST00000479361 GRAPQ13588 217 aa31.51■■■□□ 2.63
PERM1-203ENST00000479361 TTLL11Q8NHH1 800 aa31.51■■■□□ 2.63
PERM1-203ENST00000479361 GRAPLQ8TC17 118 aaPredicted RBP31.51■■■□□ 2.63
PERM1-203ENST00000479361 USP44Q9H0E7 712 aa31.51■■■□□ 2.63
PERM1-203ENST00000479361 SLX4Q8IY92 1834 aa31.5■■■□□ 2.63
PERM1-203ENST00000479361 NBPF7P0C2Y1 421 aaPredicted RBP31.5■■■□□ 2.63
PERM1-203ENST00000479361 ARHGAP27Q6ZUM4 889 aa31.5■■■□□ 2.63
PERM1-203ENST00000479361 ZNF219Q9P2Y4 722 aaPredicted RBP31.5■■■□□ 2.63
PERM1-203ENST00000479361 PPEF1O14829 653 aaPredicted RBP31.49■■■□□ 2.63
PERM1-203ENST00000479361 MS4A1P11836 297 aa31.49■■■□□ 2.63
PERM1-203ENST00000479361 DZIP1LQ8IYY4 767 aaKnown RBP31.49■■■□□ 2.63
PERM1-203ENST00000479361 TMX4Q9H1E5 349 aaPredicted RBP31.49■■■□□ 2.63
PERM1-203ENST00000479361 UTRNP46939 3433 aa31.49■■■□□ 2.63
PERM1-203ENST00000479361 C7orf43Q8WVR3 580 aa31.48■■■□□ 2.63
PERM1-203ENST00000479361 TNNQ9UQP3 1299 aa31.48■■■□□ 2.63
PERM1-203ENST00000479361 CACNA1SQ13698 1873 aa31.48■■■□□ 2.63
PERM1-203ENST00000479361 RTL9Q8NET4 1388 aa31.47■■■□□ 2.63
PERM1-203ENST00000479361 CC2D2BQ6DHV5 1058 aa31.47■■■□□ 2.63
PERM1-203ENST00000479361 TMC4Q7Z404 712 aa31.47■■■□□ 2.63
PERM1-203ENST00000479361 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.47■■■□□ 2.63
PERM1-203ENST00000479361 CCDC85AQ96PX6 553 aaPredicted RBP31.47■■■□□ 2.63
PERM1-203ENST00000479361 HDAC5Q9UQL6 1122 aa31.47■■■□□ 2.63
PERM1-203ENST00000479361 MYH3P11055 1940 aa31.46■■■□□ 2.63
PERM1-203ENST00000479361 CSF1RP07333 972 aa31.46■■■□□ 2.63
PERM1-203ENST00000479361 FOXO4P98177 505 aa31.46■■■□□ 2.63
PERM1-203ENST00000479361 CCDC93Q567U6 631 aa31.46■■■□□ 2.63
PERM1-203ENST00000479361 TMEM57Q8N5G2 664 aa31.45■■■□□ 2.63
PERM1-203ENST00000479361 SUCLG2Q96I99 432 aa31.45■■■□□ 2.63
PERM1-203ENST00000479361 CDC5LQ99459 802 aaKnown RBP31.45■■■□□ 2.63
PERM1-203ENST00000479361 GREM2Q9H772 168 aa31.45■■■□□ 2.63
PERM1-203ENST00000479361 UBTFL1P0CB47 393 aaPredicted RBP31.44■■■□□ 2.62
PERM1-203ENST00000479361 RPS8P62241 208 aaKnown RBP31.44■■■□□ 2.62
PERM1-203ENST00000479361 GRIPAP1Q4V328 841 aa31.44■■■□□ 2.62
PERM1-203ENST00000479361 SEC31BQ9NQW1 1179 aa31.44■■■□□ 2.62
PERM1-203ENST00000479361 ATP6V0A2Q9Y487 856 aa31.44■■■□□ 2.62
PERM1-203ENST00000479361 RTKN2Q8IZC4 609 aa31.43■■■□□ 2.62
PERM1-203ENST00000479361 CELF1Q92879 486 aaKnown RBP31.43■■■□□ 2.62
PERM1-203ENST00000479361 GNAI3P08754 354 aa31.42■■■□□ 2.62
PERM1-203ENST00000479361 LMBR1LQ6UX01 489 aa31.42■■■□□ 2.62
PERM1-203ENST00000479361 FAM161AQ3B820 660 aa31.41■■■□□ 2.62
PERM1-203ENST00000479361 EPHA10Q5JZY3 1008 aa31.41■■■□□ 2.62
PERM1-203ENST00000479361 ANKRD18AQ8IVF6 992 aa31.41■■■□□ 2.62
PERM1-203ENST00000479361 SP8Q8IXZ3 490 aa31.41■■■□□ 2.62
PERM1-203ENST00000479361 CHMP3Q9Y3E7 222 aa31.41■■■□□ 2.62
PERM1-203ENST00000479361 ITGA6P23229 1130 aa31.4■■■□□ 2.62
PERM1-203ENST00000479361 KAZALD1Q96I82 304 aa31.4■■■□□ 2.62
PERM1-203ENST00000479361 MEIS3Q99687 375 aa31.4■■■□□ 2.62
PERM1-203ENST00000479361 BICC1Q9H694 974 aaKnown RBP31.4■■■□□ 2.62
PERM1-203ENST00000479361 RLBP1P12271 317 aa31.39■■■□□ 2.62
PERM1-203ENST00000479361 IFIT5Q13325 482 aaKnown RBP31.39■■■□□ 2.62
PERM1-203ENST00000479361 ITPRIPQ8IWB1 547 aa31.39■■■□□ 2.62
PERM1-203ENST00000479361 ANKRD18BA2A2Z9 1011 aa31.38■■■□□ 2.61
PERM1-203ENST00000479361 PLIN1O60240 522 aa31.38■■■□□ 2.61
PERM1-203ENST00000479361 CCDC57Q2TAC2 916 aa31.38■■■□□ 2.61
PERM1-203ENST00000479361 RABL6Q3YEC7 729 aaPredicted RBP31.38■■■□□ 2.61
PERM1-203ENST00000479361 OLFM4Q6UX06 510 aa31.38■■■□□ 2.61
PERM1-203ENST00000479361 TAOK3Q9H2K8 898 aa31.38■■■□□ 2.61
PERM1-203ENST00000479361 NFKBIEO00221 500 aa31.37■■■□□ 2.61
PERM1-203ENST00000479361 PANK1Q8TE04 598 aa31.37■■■□□ 2.61
PERM1-203ENST00000479361 LTBP3Q9NS15 1303 aa31.37■■■□□ 2.61
PERM1-203ENST00000479361 TAF1P21675 1872 aa31.36■■■□□ 2.61
PERM1-203ENST00000479361 IGHMBP2P38935 993 aaKnown RBP31.36■■■□□ 2.61
PERM1-203ENST00000479361 FKBP4Q02790 459 aaKnown RBP eCLIP31.35■■■□□ 2.61
PERM1-203ENST00000479361 RASSF7Q02833 373 aa31.35■■■□□ 2.61
PERM1-203ENST00000479361 PDE3AQ14432 1141 aa31.34■■■□□ 2.61
PERM1-203ENST00000479361 ANKRD44Q8N8A2 993 aa31.34■■■□□ 2.61
PERM1-203ENST00000479361 PSMD1Q99460 953 aa31.34■■■□□ 2.61
PERM1-203ENST00000479361 FER1L6Q2WGJ9 1857 aa31.33■■■□□ 2.61
PERM1-203ENST00000479361 LMNB1P20700 586 aa31.33■■■□□ 2.61
PERM1-203ENST00000479361 TAF7LQ5H9L4 462 aa31.33■■■□□ 2.61
PERM1-203ENST00000479361 MPHOSPH8Q99549 860 aa31.33■■■□□ 2.61
PERM1-203ENST00000479361 BSDC1Q9NW68 430 aaPredicted RBP31.33■■■□□ 2.61
PERM1-203ENST00000479361 LRRFIP2Q9Y608 721 aaKnown RBP31.33■■■□□ 2.61
PERM1-203ENST00000479361 SNED1Q8TER0 1413 aa31.32■■■□□ 2.61
PERM1-203ENST00000479361 MPNDQ8N594 471 aa31.32■■■□□ 2.6
PERM1-203ENST00000479361 COL4A1P02462 1669 aa31.32■■■□□ 2.6
PERM1-203ENST00000479361 GNAI2P04899 355 aa31.31■■■□□ 2.6
PERM1-203ENST00000479361 DPP8Q6V1X1 898 aaPredicted RBP31.31■■■□□ 2.6
PERM1-203ENST00000479361 CHD4Q14839 1912 aa31.31■■■□□ 2.6
PERM1-203ENST00000479361 LRRC37AA6NMS7 1700 aa31.29■■■□□ 2.6
PERM1-203ENST00000479361 MVPQ14764 893 aaKnown RBP31.29■■■□□ 2.6
PERM1-203ENST00000479361 SLC51AQ86UW1 340 aa31.29■■■□□ 2.6
PERM1-203ENST00000479361 SUPT20HQ8NEM7 779 aa31.29■■■□□ 2.6
PERM1-203ENST00000479361 ZBTB7BO15156 539 aaPredicted RBP31.28■■■□□ 2.6
PERM1-203ENST00000479361 RRP1P56182 461 aaKnown RBP31.28■■■□□ 2.6
PERM1-203ENST00000479361 C9orf131Q5VYM1 1079 aa31.28■■■□□ 2.6
PERM1-203ENST00000479361 RNF181Q9P0P0 153 aa31.28■■■□□ 2.6
PERM1-203ENST00000479361 DDX19BQ9UMR2 479 aa31.28■■■□□ 2.6
PERM1-203ENST00000479361 NSFL1CQ9UNZ2 370 aaKnown RBP31.28■■■□□ 2.6
PERM1-203ENST00000479361 RTFDC1Q9BY42 306 aaPredicted RBP31.27■■■□□ 2.6
PERM1-203ENST00000479361 CHMP4BQ9H444 224 aaKnown RBP31.27■■■□□ 2.6
PERM1-203ENST00000479361 ANKIB1Q9P2G1 1089 aa31.27■■■□□ 2.6
PERM1-203ENST00000479361 COG6Q9Y2V7 657 aa31.27■■■□□ 2.6
PERM1-203ENST00000479361 ZNF277Q9NRM2 450 aaPredicted RBP31.26■■■□□ 2.59
PERM1-203ENST00000479361 MINPP1Q9UNW1 487 aa31.26■■■□□ 2.59
PERM1-203ENST00000479361 GPSM2P81274 684 aa31.25■■■□□ 2.59
PERM1-203ENST00000479361 LDHAL6AQ6ZMR3 332 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms