RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
PCIF1-202ENST00000479348 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
PCIF1-202ENST00000479348 BBOX1O75936 387 aa17.59■□□□□ 0.41
PCIF1-202ENST00000479348 CSF1RP07333 972 aa17.59■□□□□ 0.41
PCIF1-202ENST00000479348 GNAI3P08754 354 aa17.59■□□□□ 0.41
PCIF1-202ENST00000479348 NBPF7P0C2Y1 421 aaPredicted RBP17.59■□□□□ 0.41
PCIF1-202ENST00000479348 YBX3P16989 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCIF1-202ENST00000479348 SOGA3Q5TF21 947 aa17.59■□□□□ 0.41
PCIF1-202ENST00000479348 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
PCIF1-202ENST00000479348 RTL9Q8NET4 1388 aa17.59■□□□□ 0.41
PCIF1-202ENST00000479348 FOXO4P98177 505 aa17.58■□□□□ 0.4
PCIF1-202ENST00000479348 GRAPQ13588 217 aa17.58■□□□□ 0.4
PCIF1-202ENST00000479348 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
PCIF1-202ENST00000479348 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.4
PCIF1-202ENST00000479348 GRAPLQ8TC17 118 aaPredicted RBP17.58■□□□□ 0.4
PCIF1-202ENST00000479348 UBTFL1P0CB47 393 aaPredicted RBP17.57■□□□□ 0.4
PCIF1-202ENST00000479348 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
PCIF1-202ENST00000479348 GRIPAP1Q4V328 841 aa17.57■□□□□ 0.4
PCIF1-202ENST00000479348 CC2D2BQ6DHV5 1058 aa17.57■□□□□ 0.4
PCIF1-202ENST00000479348 C7orf43Q8WVR3 580 aa17.57■□□□□ 0.4
PCIF1-202ENST00000479348 WWC3Q9ULE0 1092 aa17.57■□□□□ 0.4
PCIF1-202ENST00000479348 ARFGEF1Q9Y6D6 1849 aa17.57■□□□□ 0.4
PCIF1-202ENST00000479348 RLBP1P12271 317 aa17.56■□□□□ 0.4
PCIF1-202ENST00000479348 SUCLG2Q96I99 432 aa17.56■□□□□ 0.4
PCIF1-202ENST00000479348 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
PCIF1-202ENST00000479348 MYH3P11055 1940 aa17.55■□□□□ 0.4
PCIF1-202ENST00000479348 C21orf2O43822 256 aa17.55■□□□□ 0.4
PCIF1-202ENST00000479348 RPS8P62241 208 aaKnown RBP17.55■□□□□ 0.4
PCIF1-202ENST00000479348 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
PCIF1-202ENST00000479348 CDC5LQ99459 802 aaKnown RBP17.55■□□□□ 0.4
PCIF1-202ENST00000479348 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
PCIF1-202ENST00000479348 PPEF1O14829 653 aaPredicted RBP17.54■□□□□ 0.4
PCIF1-202ENST00000479348 PLIN1O60240 522 aa17.54■□□□□ 0.4
PCIF1-202ENST00000479348 RABL6Q3YEC7 729 aaPredicted RBP17.54■□□□□ 0.4
PCIF1-202ENST00000479348 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
PCIF1-202ENST00000479348 KAZALD1Q96I82 304 aa17.54■□□□□ 0.4
PCIF1-202ENST00000479348 MEIS3Q99687 375 aa17.54■□□□□ 0.4
PCIF1-202ENST00000479348 GREM2Q9H772 168 aa17.54■□□□□ 0.4
PCIF1-202ENST00000479348 IFIT5Q13325 482 aaKnown RBP17.53■□□□□ 0.4
PCIF1-202ENST00000479348 CCDC93Q567U6 631 aa17.53■□□□□ 0.4
PCIF1-202ENST00000479348 EPHA10Q5JZY3 1008 aa17.53■□□□□ 0.4
PCIF1-202ENST00000479348 ANKRD18AQ8IVF6 992 aa17.53■□□□□ 0.4
PCIF1-202ENST00000479348 SP8Q8IXZ3 490 aa17.53■□□□□ 0.4
PCIF1-202ENST00000479348 RTKN2Q8IZC4 609 aa17.53■□□□□ 0.4
PCIF1-202ENST00000479348 PANK1Q8TE04 598 aa17.53■□□□□ 0.4
PCIF1-202ENST00000479348 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
PCIF1-202ENST00000479348 BICC1Q9H694 974 aaKnown RBP17.53■□□□□ 0.4
PCIF1-202ENST00000479348 SEC31BQ9NQW1 1179 aa17.53■□□□□ 0.4
PCIF1-202ENST00000479348 ATP6V0A2Q9Y487 856 aa17.53■□□□□ 0.4
PCIF1-202ENST00000479348 ANKRD18BA2A2Z9 1011 aa17.52■□□□□ 0.4
PCIF1-202ENST00000479348 ITGA6P23229 1130 aa17.52■□□□□ 0.4
PCIF1-202ENST00000479348 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
PCIF1-202ENST00000479348 ARHGAP27Q6ZUM4 889 aa17.52■□□□□ 0.4
PCIF1-202ENST00000479348 CELF1Q92879 486 aaKnown RBP17.52■□□□□ 0.4
PCIF1-202ENST00000479348 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.4
PCIF1-202ENST00000479348 ZBTB7BO15156 539 aaPredicted RBP17.51■□□□□ 0.39
PCIF1-202ENST00000479348 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
PCIF1-202ENST00000479348 MVPQ14764 893 aaKnown RBP17.51■□□□□ 0.39
PCIF1-202ENST00000479348 FAM161AQ3B820 660 aa17.51■□□□□ 0.39
PCIF1-202ENST00000479348 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
PCIF1-202ENST00000479348 DDX19BQ9UMR2 479 aa17.51■□□□□ 0.39
PCIF1-202ENST00000479348 CHMP3Q9Y3E7 222 aa17.51■□□□□ 0.39
PCIF1-202ENST00000479348 LTBP3Q9NS15 1303 aa17.51■□□□□ 0.39
PCIF1-202ENST00000479348 GNAI2P04899 355 aa17.5■□□□□ 0.39
PCIF1-202ENST00000479348 IGHMBP2P38935 993 aaKnown RBP17.5■□□□□ 0.39
PCIF1-202ENST00000479348 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
PCIF1-202ENST00000479348 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
PCIF1-202ENST00000479348 LRRFIP2Q9Y608 721 aaKnown RBP17.5■□□□□ 0.39
PCIF1-202ENST00000479348 CACNA1SQ13698 1873 aa17.5■□□□□ 0.39
PCIF1-202ENST00000479348 PSMD1Q99460 953 aa17.48■□□□□ 0.39
PCIF1-202ENST00000479348 MPHOSPH8Q99549 860 aa17.48■□□□□ 0.39
PCIF1-202ENST00000479348 COG6Q9Y2V7 657 aa17.48■□□□□ 0.39
PCIF1-202ENST00000479348 NFKBIEO00221 500 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCIF1-202ENST00000479348 MTX1Q13505 466 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 TAF7LQ5H9L4 462 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 MPNDQ8N594 471 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 TAF1P21675 1872 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 C20orf194Q5TEA3 1177 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 SUPT20HQ8NEM7 779 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 VPS33BQ9H267 617 aa17.47■□□□□ 0.39
PCIF1-202ENST00000479348 FER1L6Q2WGJ9 1857 aa17.46■□□□□ 0.39
PCIF1-202ENST00000479348 LMNB1P20700 586 aa17.46■□□□□ 0.38
PCIF1-202ENST00000479348 DPP8Q6V1X1 898 aaPredicted RBP17.46■□□□□ 0.38
PCIF1-202ENST00000479348 LDHAL6AQ6ZMR3 332 aa17.46■□□□□ 0.38
PCIF1-202ENST00000479348 RTFDC1Q9BY42 306 aaPredicted RBP17.46■□□□□ 0.38
PCIF1-202ENST00000479348 PODXL2Q9NZ53 605 aa17.46■□□□□ 0.38
PCIF1-202ENST00000479348 LRRC37AA6NMS7 1700 aa17.45■□□□□ 0.38
PCIF1-202ENST00000479348 ANKRD2Q9GZV1 360 aa17.45■□□□□ 0.38
PCIF1-202ENST00000479348 ZBTB40Q9NUA8 1239 aa17.45■□□□□ 0.38
PCIF1-202ENST00000479348 FBXO3Q9UK99 471 aa17.45■□□□□ 0.38
PCIF1-202ENST00000479348 MINPP1Q9UNW1 487 aa17.45■□□□□ 0.38
PCIF1-202ENST00000479348 NSFL1CQ9UNZ2 370 aaKnown RBP17.45■□□□□ 0.38
PCIF1-202ENST00000479348 COL4A1P02462 1669 aa17.44■□□□□ 0.38
PCIF1-202ENST00000479348 XDHP47989 1333 aa17.44■□□□□ 0.38
PCIF1-202ENST00000479348 RFX5P48382 616 aaPredicted RBP17.43■□□□□ 0.38
PCIF1-202ENST00000479348 GPSM2P81274 684 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms