RNA–Protein interactions for RNA: ENST00000479113.1

RPN1-203, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-203ENST00000479113 USP17L2Q6R6M4 530 aa5.95□□□□□ -1.46
RPN1-203ENST00000479113 USP17L1Q7RTZ2 530 aa5.95□□□□□ -1.46
RPN1-203ENST00000479113 PLEKHM2Q8IWE5 1019 aa5.95□□□□□ -1.46
RPN1-203ENST00000479113 LINC00528Q8N1L1 170 aa5.95□□□□□ -1.46
RPN1-203ENST00000479113 TSEN34Q9BSV6 310 aaKnown RBP5.95□□□□□ -1.46
RPN1-203ENST00000479113 YTHDC2Q9H6S0 1430 aaKnown RBP5.95□□□□□ -1.46
RPN1-203ENST00000479113 ZNF395Q9H8N7 513 aaPredicted RBP5.95□□□□□ -1.46
RPN1-203ENST00000479113 PCDHGA11Q9Y5H2 935 aa5.95□□□□□ -1.46
RPN1-203ENST00000479113 GPRASP1Q5JY77 1395 aa5.94□□□□□ -1.46
RPN1-203ENST00000479113 SOBPA7XYQ1 873 aa5.94□□□□□ -1.46
RPN1-203ENST00000479113 MAN1A2O60476 641 aa5.94□□□□□ -1.46
RPN1-203ENST00000479113 MYCP01106 439 aaPredicted RBP5.94□□□□□ -1.46
RPN1-203ENST00000479113 NEUROD1Q13562 356 aa5.94□□□□□ -1.46
RPN1-203ENST00000479113 NRXN3Q9Y4C0 1643 aa5.94□□□□□ -1.46
RPN1-203ENST00000479113 ERBB4Q15303 1308 aa5.94□□□□□ -1.46
RPN1-203ENST00000479113 XRN1Q8IZH2 1706 aaKnown RBP5.94□□□□□ -1.46
RPN1-203ENST00000479113 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.94□□□□□ -1.46
RPN1-203ENST00000479113 SPATA31E1Q6ZUB1 1445 aa5.93□□□□□ -1.46
RPN1-203ENST00000479113 AHDC1Q5TGY3 1603 aaPredicted RBP5.93□□□□□ -1.46
RPN1-203ENST00000479113 A0A1W2PRU2 124 aa5.93□□□□□ -1.46
RPN1-203ENST00000479113 ZBTB7CA1YPR0 619 aa5.93□□□□□ -1.46
RPN1-203ENST00000479113 ATP5J2-PTCD1G3V325 749 aa5.93□□□□□ -1.46
RPN1-203ENST00000479113 SPINT1O43278 529 aa5.93□□□□□ -1.46
RPN1-203ENST00000479113 LZTS3O60299 673 aaPredicted RBP5.93□□□□□ -1.46
RPN1-203ENST00000479113 LMOD1P29536 600 aaPredicted RBP5.93□□□□□ -1.46
RPN1-203ENST00000479113 SRPK2P78362 688 aaKnown RBP5.93□□□□□ -1.46
RPN1-203ENST00000479113 EML3Q32P44 896 aa5.93□□□□□ -1.46
RPN1-203ENST00000479113 SIRT1Q96EB6 747 aa5.93□□□□□ -1.46
RPN1-203ENST00000479113 INSM2Q96T92 566 aaPredicted RBP5.93□□□□□ -1.46
RPN1-203ENST00000479113 ATAD2Q6PL18 1390 aa5.93□□□□□ -1.46
RPN1-203ENST00000479113 COL16A1Q07092 1604 aaPredicted RBP5.92□□□□□ -1.46
RPN1-203ENST00000479113 PIK3C2GO75747 1445 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 SETD1AO15047 1707 aaKnown RBP5.92□□□□□ -1.46
RPN1-203ENST00000479113 WASLO00401 505 aaPredicted RBP5.92□□□□□ -1.46
RPN1-203ENST00000479113 ZBTB7BO15156 539 aaPredicted RBP5.92□□□□□ -1.46
RPN1-203ENST00000479113 VSIG8P0DPA2 414 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
RPN1-203ENST00000479113 CTSOP43234 321 aaPredicted RBP5.92□□□□□ -1.46
RPN1-203ENST00000479113 CYP2U1Q7Z449 544 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 UNC5CLQ8IV45 518 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 CCDC82Q8N4S0 544 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 ZSCAN1Q8NBB4 408 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 ARHGEF10LQ9HCE6 1279 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 MKRN1Q9UHC7 482 aaKnown RBP5.92□□□□□ -1.46
RPN1-203ENST00000479113 NOD1Q9Y239 953 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 PPLO60437 1756 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 SPATA31A3Q5VYP0 1347 aa5.92□□□□□ -1.46
RPN1-203ENST00000479113 EIF3AQ14152 1382 aaKnown RBP5.92□□□□□ -1.46
RPN1-203ENST00000479113 PRAG1Q86YV5 1406 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 RFX1P22670 979 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 EVA1CP58658 441 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 GTF2IP78347 998 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 CLDN10P78369 228 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 NUTM2GQ5VZR2 741 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 CDK19Q9BWU1 502 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 ETNK1Q9HBU6 452 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 PRDM11Q9NQV5 511 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 STRN4Q9NRL3 753 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 RAB6BQ9NRW1 208 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 SERPINA10Q9UK55 444 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 KIAA1024Q9UPX6 916 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 ARHGEF10O15013 1369 aa5.91□□□□□ -1.46
RPN1-203ENST00000479113 MEN1O00255 615 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 PPFIA3O75145 1194 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 GNRH1P01148 92 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 IL2RAP01589 272 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 SCNN1DP51172 638 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 CDCA8Q53HL2 280 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 FOXD4L5Q5VV16 416 aaPredicted RBP5.9□□□□□ -1.46
RPN1-203ENST00000479113 NUDT16Q96DE0 195 aaKnown RBP5.9□□□□□ -1.46
RPN1-203ENST00000479113 CCDC97Q96F63 343 aaPredicted RBP5.9□□□□□ -1.46
RPN1-203ENST00000479113 XAGE2Q96GT9 111 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 BTG4Q9NY30 223 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 USP35Q9P2H5 1018 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 HRH3Q9Y5N1 445 aa5.9□□□□□ -1.46
RPN1-203ENST00000479113 IFT172Q9UG01 1749 aa5.9□□□□□ -1.47
RPN1-203ENST00000479113 RGS12O14924 1447 aa5.9□□□□□ -1.47
RPN1-203ENST00000479113 TECPR2O15040 1411 aa5.9□□□□□ -1.47
RPN1-203ENST00000479113 SHPRHQ149N8 1683 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 FIGNL2A6NMB9 653 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 TTLL8A6PVC2 850 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 TMEM229AB2RXF0 380 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 DKK1O94907 266 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 CLN3Q13286 438 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.89□□□□□ -1.471e-7■□□□□ 8.8
RPN1-203ENST00000479113 OGFOD1Q8N543 542 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 ABTB2Q8N961 1025 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 POLMQ9NP87 494 aaPredicted RBP5.89□□□□□ -1.47
RPN1-203ENST00000479113 DNMT3LQ9UJW3 386 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 TNS3Q68CZ2 1445 aa5.89□□□□□ -1.47
RPN1-203ENST00000479113 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.88□□□□□ -1.47
RPN1-203ENST00000479113 FAM83GA6ND36 823 aa5.88□□□□□ -1.47
RPN1-203ENST00000479113 RASA1P20936 1047 aa5.88□□□□□ -1.47
RPN1-203ENST00000479113 GDF10P55107 478 aa5.88□□□□□ -1.47
RPN1-203ENST00000479113 ZC3H6P61129 1189 aaKnown RBP5.88□□□□□ -1.47
RPN1-203ENST00000479113 VPS72Q15906 364 aa5.88□□□□□ -1.47
RPN1-203ENST00000479113 CRTC2Q53ET0 693 aaPredicted RBP5.88□□□□□ -1.47
RPN1-203ENST00000479113 KRT27Q7Z3Y8 459 aa5.88□□□□□ -1.47
RPN1-203ENST00000479113 TRIM50Q86XT4 487 aa5.88□□□□□ -1.47
RPN1-203ENST00000479113 RNF217Q8TC41 542 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms