RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 MAP3K11Q16584 847 aa13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 ICE2Q659A1 982 aa13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 NRBP1Q9UHY1 535 aa13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 BTBD11A6QL63 1104 aa13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 CCDC186Q7Z3E2 898 aa13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 EDC3Q96F86 508 aaKnown RBP13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 DDX11Q96FC9 970 aa13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 C16orf45Q96MC5 204 aaPredicted RBP13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 TNMDQ9H2S6 317 aa13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 TLR7Q9NYK1 1049 aaKnown RBP13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 CCDC171Q6TFL3 1326 aa13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 ADAMTS13Q76LX8 1427 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 TYRO3Q06418 890 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 SYCP1Q15431 976 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 ANO6Q4KMQ2 910 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 CT47A1Q5JQC4 288 aaPredicted RBP13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 GPATCH11Q8N954 259 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 LRRC59Q96AG4 307 aaKnown RBP13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 GPATCH3Q96I76 525 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 FSD1Q9BTV5 496 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 TRIM5Q9C035 493 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 AKAP12Q02952 1782 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 NBPF6Q5VWK0 638 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 ZSCAN31Q96LW9 406 aaPredicted RBP13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 NBPF4Q96M43 638 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 CEP83Q9Y592 693 aa13.01□□□□□ -0.33
LRRFIP1-211ENST00000478958 TTC41PQ6P2S7 1318 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 A0A0D9SFI3 127 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 GOLGA6L6A8MZA4 724 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 NECTIN1Q15223 517 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 GRIPAP1Q4V328 841 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 FAM200AQ8TCP9 573 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 BICD2Q8TD16 824 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 SPATA32Q96LK8 384 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 EAF2Q96CJ1 260 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-211ENST00000478958 EID1Q9Y6B2 187 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
LRRFIP1-211ENST00000478958 SIPA1L2Q9P2F8 1722 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-211ENST00000478958 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 BLOC1S2Q6QNY1 142 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 EVI5LQ96CN4 794 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 SLC27A2O14975 620 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 CHGBP05060 677 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 TOMM22Q9NS69 142 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 PTPRUQ92729 1446 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 JAK2O60674 1132 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 CYP2C19P33261 490 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 FBXW7Q969H0 707 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 LRRC2Q9BYS8 371 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 DNAJC25Q9H1X3 360 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 CBX8Q9HC52 389 aa12.99□□□□□ -0.33
LRRFIP1-211ENST00000478958 ADCY9O60503 1353 aa12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 A0A087WWV3 80 aa12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 CCDC172P0C7W6 258 aa12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 ZNF592Q92610 1267 aa12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 BRMS1Q9HCU9 246 aa12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 RGPD1P0DJD0 1748 aa12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 NR1I2O75469 434 aa12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 NOL10Q9BSC4 688 aaKnown RBP12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 BICC1Q9H694 974 aaKnown RBP12.98□□□□□ -0.33
LRRFIP1-211ENST00000478958 SASH1O94885 1247 aa12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 NAA30Q147X3 362 aaPredicted RBP12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 C10orf67Q8IYJ2 551 aa12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 GUCY2CP25092 1073 aa12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 EGFL6Q8IUX8 553 aa12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 MAP4K1Q92918 833 aa12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 SUCLG2Q96I99 432 aa12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 DBF4Q9UBU7 674 aaPredicted RBP12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 SETD1BQ9UPS6 1966 aaKnown RBP12.97□□□□□ -0.33
LRRFIP1-211ENST00000478958 XRN1Q8IZH2 1706 aaKnown RBP12.96□□□□□ -0.33
LRRFIP1-211ENST00000478958 PSMA5P28066 241 aa12.96□□□□□ -0.33
LRRFIP1-211ENST00000478958 GYS2P54840 703 aa12.96□□□□□ -0.33
LRRFIP1-211ENST00000478958 CASQ1P31415 396 aa12.96□□□□□ -0.34
LRRFIP1-211ENST00000478958 ZNF165P49910 485 aa12.96□□□□□ -0.34
LRRFIP1-211ENST00000478958 LEO1Q8WVC0 666 aaPredicted RBP12.96□□□□□ -0.34
LRRFIP1-211ENST00000478958 PDCP20941 246 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 H3BQV1 296 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 MYL6BP14649 208 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 IFFO2Q5TF58 517 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 CCDC129Q6ZRS4 1044 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 ST7Q9NRC1 585 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 KCNA6P17658 529 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 ERC1Q8IUD2 1116 aa12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 ERCC4Q92889 916 aaPredicted RBP12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 SCAND2PQ9GZW5 306 aaPredicted RBP12.95□□□□□ -0.34
LRRFIP1-211ENST00000478958 RPS6KB1P23443 525 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms