RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 C1orf115Q9H7X2 142 aa17.02■□□□□ 0.32
NUDCD3-207ENST00000478769 SRGNP10124 158 aa17.01■□□□□ 0.31
NUDCD3-207ENST00000478769 DPEP1P16444 411 aa17.01■□□□□ 0.31
NUDCD3-207ENST00000478769 SF3B3Q15393 1217 aaKnown RBP17.01■□□□□ 0.31
NUDCD3-207ENST00000478769 TTLL11Q8NHH1 800 aa17.01■□□□□ 0.31
NUDCD3-207ENST00000478769 CCDC85AQ96PX6 553 aaPredicted RBP17.01■□□□□ 0.31
NUDCD3-207ENST00000478769 ZBTB40Q9NUA8 1239 aa17.01■□□□□ 0.31
NUDCD3-207ENST00000478769 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
NUDCD3-207ENST00000478769 A0A0G2JLW4 131 aa17■□□□□ 0.31
NUDCD3-207ENST00000478769 GNAI2P04899 355 aa17■□□□□ 0.31
NUDCD3-207ENST00000478769 KCNA3P22001 575 aa17■□□□□ 0.31
NUDCD3-207ENST00000478769 TGFB2P61812 414 aa17■□□□□ 0.31
NUDCD3-207ENST00000478769 FAM161AQ3B820 660 aa17■□□□□ 0.31
NUDCD3-207ENST00000478769 RABL6Q3YEC7 729 aaPredicted RBP17■□□□□ 0.31
NUDCD3-207ENST00000478769 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
NUDCD3-207ENST00000478769 GREM2Q9H772 168 aa17■□□□□ 0.31
NUDCD3-207ENST00000478769 RTL9Q8NET4 1388 aa17■□□□□ 0.31
NUDCD3-207ENST00000478769 H0YIN7 160 aa16.99■□□□□ 0.31
NUDCD3-207ENST00000478769 CSF1RP07333 972 aa16.99■□□□□ 0.31
NUDCD3-207ENST00000478769 CCDC152Q4G0S7 254 aa16.99■□□□□ 0.31
NUDCD3-207ENST00000478769 RPGRQ92834 1020 aaKnown RBP16.99■□□□□ 0.31
NUDCD3-207ENST00000478769 SYT17Q9BSW7 474 aa16.99■□□□□ 0.31
NUDCD3-207ENST00000478769 NPR1P16066 1061 aa16.98■□□□□ 0.31
NUDCD3-207ENST00000478769 HOXA10P31260 410 aaPredicted RBP16.98■□□□□ 0.31
NUDCD3-207ENST00000478769 EXOC6Q8TAG9 804 aa16.98■□□□□ 0.31
NUDCD3-207ENST00000478769 MASTLQ96GX5 879 aa16.98■□□□□ 0.31
NUDCD3-207ENST00000478769 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
NUDCD3-207ENST00000478769 PDZRN3Q9UPQ7 1066 aa16.98■□□□□ 0.31
NUDCD3-207ENST00000478769 TAF1P21675 1872 aa16.98■□□□□ 0.31
NUDCD3-207ENST00000478769 STYK1Q6J9G0 422 aa16.97■□□□□ 0.31
NUDCD3-207ENST00000478769 UTRNP46939 3433 aa16.97■□□□□ 0.31
NUDCD3-207ENST00000478769 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
NUDCD3-207ENST00000478769 SLC51AQ86UW1 340 aa16.96■□□□□ 0.31
NUDCD3-207ENST00000478769 ZNF622Q969S3 477 aaKnown RBP eCLIP16.96■□□□□ 0.31
NUDCD3-207ENST00000478769 RBM17Q96I25 401 aaKnown RBP16.96■□□□□ 0.31
NUDCD3-207ENST00000478769 CHMP4BQ9H444 224 aaKnown RBP16.96■□□□□ 0.31
NUDCD3-207ENST00000478769 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.31
NUDCD3-207ENST00000478769 HDAC5Q9UQL6 1122 aa16.96■□□□□ 0.31
NUDCD3-207ENST00000478769 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.31
NUDCD3-207ENST00000478769 SPEF2Q9C093 1822 aa16.96■□□□□ 0.3
NUDCD3-207ENST00000478769 ITGA6P23229 1130 aa16.95■□□□□ 0.3
NUDCD3-207ENST00000478769 MTX1Q13505 466 aa16.95■□□□□ 0.3
NUDCD3-207ENST00000478769 CEP85Q6P2H3 762 aa16.95■□□□□ 0.3
NUDCD3-207ENST00000478769 DDX46Q7L014 1031 aaKnown RBP16.95■□□□□ 0.3
NUDCD3-207ENST00000478769 CELF1Q92879 486 aaKnown RBP16.95■□□□□ 0.3
NUDCD3-207ENST00000478769 CRAMP1Q96RY5 1269 aa16.95■□□□□ 0.3
NUDCD3-207ENST00000478769 SLX4Q8IY92 1834 aa16.95■□□□□ 0.3
NUDCD3-207ENST00000478769 LRRC37AA6NMS7 1700 aa16.94■□□□□ 0.3
NUDCD3-207ENST00000478769 GRAPQ13588 217 aa16.94■□□□□ 0.3
NUDCD3-207ENST00000478769 PRPF40BQ6NWY9 871 aaKnown RBP16.94■□□□□ 0.3
NUDCD3-207ENST00000478769 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
NUDCD3-207ENST00000478769 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
NUDCD3-207ENST00000478769 RFX5P48382 616 aaPredicted RBP16.93■□□□□ 0.3
NUDCD3-207ENST00000478769 IFIT5Q13325 482 aaKnown RBP16.93■□□□□ 0.3
NUDCD3-207ENST00000478769 PIM2Q9P1W9 311 aa16.93■□□□□ 0.3
NUDCD3-207ENST00000478769 ANKRD18BA2A2Z9 1011 aa16.92■□□□□ 0.3
NUDCD3-207ENST00000478769 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
NUDCD3-207ENST00000478769 CCDC57Q2TAC2 916 aa16.92■□□□□ 0.3
NUDCD3-207ENST00000478769 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
NUDCD3-207ENST00000478769 CNKSR1Q969H4 720 aa16.92■□□□□ 0.3
NUDCD3-207ENST00000478769 ZNF594Q96JF6 807 aaPredicted RBP16.92■□□□□ 0.3
NUDCD3-207ENST00000478769 CDC5LQ99459 802 aaKnown RBP16.92■□□□□ 0.3
NUDCD3-207ENST00000478769 PPEF1O14829 653 aaPredicted RBP16.91■□□□□ 0.3
NUDCD3-207ENST00000478769 ALDH1B1P30837 517 aa16.91■□□□□ 0.3
NUDCD3-207ENST00000478769 ATP8B2P98198 1209 aa16.91■□□□□ 0.3
NUDCD3-207ENST00000478769 DALRD3Q5D0E6 543 aaKnown RBP16.91■□□□□ 0.3
NUDCD3-207ENST00000478769 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
NUDCD3-207ENST00000478769 KLHDC4Q8TBB5 520 aa16.91■□□□□ 0.3
NUDCD3-207ENST00000478769 PCDHB15Q9Y5E8 787 aa16.91■□□□□ 0.3
NUDCD3-207ENST00000478769 RPS8P62241 208 aaKnown RBP16.9■□□□□ 0.3
NUDCD3-207ENST00000478769 PTPN12Q05209 780 aaKnown RBP16.9■□□□□ 0.3
NUDCD3-207ENST00000478769 POLA2Q14181 598 aa16.9■□□□□ 0.3
NUDCD3-207ENST00000478769 OLFM4Q6UX06 510 aa16.9■□□□□ 0.3
NUDCD3-207ENST00000478769 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
NUDCD3-207ENST00000478769 SSH3Q8TE77 659 aa16.9■□□□□ 0.3
NUDCD3-207ENST00000478769 PA2G4Q9UQ80 394 aaKnown RBP16.9■□□□□ 0.3
NUDCD3-207ENST00000478769 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
NUDCD3-207ENST00000478769 SNED1Q8TER0 1413 aa16.89■□□□□ 0.29
NUDCD3-207ENST00000478769 TAF7LQ5H9L4 462 aa16.89■□□□□ 0.29
NUDCD3-207ENST00000478769 RPAP2Q8IXW5 612 aaPredicted RBP16.89■□□□□ 0.29
NUDCD3-207ENST00000478769 C7orf43Q8WVR3 580 aa16.89■□□□□ 0.29
NUDCD3-207ENST00000478769 BCS1LQ9Y276 419 aa16.89■□□□□ 0.29
NUDCD3-207ENST00000478769 A0A1B0GUL6 1792 aa16.89■□□□□ 0.29
NUDCD3-207ENST00000478769 LTBP1Q14766 1721 aa16.88■□□□□ 0.29
NUDCD3-207ENST00000478769 BBOX1O75936 387 aa16.88■□□□□ 0.29
NUDCD3-207ENST00000478769 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
NUDCD3-207ENST00000478769 AAMPQ13685 434 aa16.88■□□□□ 0.29
NUDCD3-207ENST00000478769 PUS3Q9BZE2 481 aaKnown RBP16.88■□□□□ 0.29
NUDCD3-207ENST00000478769 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
NUDCD3-207ENST00000478769 DUOX1Q9NRD9 1551 aa16.87■□□□□ 0.29
NUDCD3-207ENST00000478769 C21orf2O43822 256 aa16.87■□□□□ 0.29
NUDCD3-207ENST00000478769 NEFLP07196 543 aa16.87■□□□□ 0.29
NUDCD3-207ENST00000478769 YBX3P16989 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
NUDCD3-207ENST00000478769 SIL1Q9H173 461 aa16.87■□□□□ 0.29
NUDCD3-207ENST00000478769 COPRSQ9NQ92 184 aa16.87■□□□□ 0.29
NUDCD3-207ENST00000478769 BSDC1Q9NW68 430 aaPredicted RBP16.87■□□□□ 0.29
NUDCD3-207ENST00000478769 ATP6V0A2Q9Y487 856 aa16.87■□□□□ 0.29
NUDCD3-207ENST00000478769 LRRC24Q50LG9 513 aa16.86■□□□□ 0.29
NUDCD3-207ENST00000478769 LDHAL6AQ6ZMR3 332 aa16.86■□□□□ 0.29
NUDCD3-207ENST00000478769 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms