RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
HDAC8-217ENST00000478743 A0A0C4DFX4 3053 aa16.67■□□□□ 0.26
HDAC8-217ENST00000478743 KIAA2012Q0VF49 1180 aa16.67■□□□□ 0.26
HDAC8-217ENST00000478743 RBM26Q5T8P6 1007 aaKnown RBP16.67■□□□□ 0.26
HDAC8-217ENST00000478743 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
HDAC8-217ENST00000478743 KIAA0100Q14667 2235 aaKnown RBP16.67■□□□□ 0.26
HDAC8-217ENST00000478743 CUL9Q8IWT3 2517 aa16.66■□□□□ 0.26
HDAC8-217ENST00000478743 CEMIPQ8WUJ3 1361 aa16.66■□□□□ 0.26
HDAC8-217ENST00000478743 LRRC37AA6NMS7 1700 aa16.66■□□□□ 0.26
HDAC8-217ENST00000478743 H7C1D1 291 aa16.66■□□□□ 0.26
HDAC8-217ENST00000478743 GRIPAP1Q4V328 841 aa16.66■□□□□ 0.26
HDAC8-217ENST00000478743 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
HDAC8-217ENST00000478743 GGA3Q9NZ52 723 aa16.66■□□□□ 0.26
HDAC8-217ENST00000478743 ATP6V0A2Q9Y487 856 aa16.66■□□□□ 0.26
HDAC8-217ENST00000478743 ABCC4O15439 1325 aa16.66■□□□□ 0.26
HDAC8-217ENST00000478743 RANBP2P49792 3224 aaKnown RBP16.66■□□□□ 0.26
HDAC8-217ENST00000478743 SCN9AQ15858 1988 aa16.66■□□□□ 0.26
HDAC8-217ENST00000478743 PSMD14O00487 310 aa16.65■□□□□ 0.26
HDAC8-217ENST00000478743 GPTP24298 496 aa16.65■□□□□ 0.26
HDAC8-217ENST00000478743 TNIP1Q15025 636 aa16.65■□□□□ 0.26
HDAC8-217ENST00000478743 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
HDAC8-217ENST00000478743 COL4A1P02462 1669 aa16.65■□□□□ 0.26
HDAC8-217ENST00000478743 MKRN3Q13064 507 aaKnown RBP16.64■□□□□ 0.25
HDAC8-217ENST00000478743 SUSD4Q5VX71 490 aa16.64■□□□□ 0.25
HDAC8-217ENST00000478743 CEP290O15078 2479 aa16.64■□□□□ 0.25
HDAC8-217ENST00000478743 DDX60Q8IY21 1712 aaKnown RBP16.63■□□□□ 0.25
HDAC8-217ENST00000478743 RGL2O15211 777 aa16.63■□□□□ 0.25
HDAC8-217ENST00000478743 NTSR2O95665 410 aa16.63■□□□□ 0.25
HDAC8-217ENST00000478743 DPP8Q6V1X1 898 aaPredicted RBP16.63■□□□□ 0.25
HDAC8-217ENST00000478743 DCPSQ96C86 337 aaKnown RBP16.63■□□□□ 0.25
HDAC8-217ENST00000478743 NYXQ9GZU5 481 aa16.63■□□□□ 0.25
HDAC8-217ENST00000478743 VPS33BQ9H267 617 aa16.63■□□□□ 0.25
HDAC8-217ENST00000478743 PANK3Q9H999 370 aa16.63■□□□□ 0.25
HDAC8-217ENST00000478743 KCNQ5Q9NR82 932 aa16.63■□□□□ 0.25
HDAC8-217ENST00000478743 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
HDAC8-217ENST00000478743 RTL9Q8NET4 1388 aa16.63■□□□□ 0.25
HDAC8-217ENST00000478743 IBTKQ9P2D0 1353 aaPredicted RBP16.63■□□□□ 0.25
HDAC8-217ENST00000478743 ANKRD36CQ5JPF3 1778 aa16.62■□□□□ 0.25
HDAC8-217ENST00000478743 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
HDAC8-217ENST00000478743 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
HDAC8-217ENST00000478743 H0YGN5 161 aa16.62■□□□□ 0.25
HDAC8-217ENST00000478743 FKTNO75072 461 aa16.62■□□□□ 0.25
HDAC8-217ENST00000478743 NOM1Q5C9Z4 860 aaKnown RBP16.61■□□□□ 0.25
HDAC8-217ENST00000478743 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
HDAC8-217ENST00000478743 REM2Q8IYK8 340 aaPredicted RBP16.61■□□□□ 0.25
HDAC8-217ENST00000478743 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
HDAC8-217ENST00000478743 SUPT20HQ8NEM7 779 aa16.61■□□□□ 0.25
HDAC8-217ENST00000478743 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
HDAC8-217ENST00000478743 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
HDAC8-217ENST00000478743 CAP1Q01518 475 aa16.6■□□□□ 0.25
HDAC8-217ENST00000478743 KIF4BQ2VIQ3 1234 aa16.6■□□□□ 0.25
HDAC8-217ENST00000478743 TTLL7Q6ZT98 887 aa16.6■□□□□ 0.25
HDAC8-217ENST00000478743 OTOP1Q7RTM1 612 aa16.6■□□□□ 0.25
HDAC8-217ENST00000478743 MPNDQ8N594 471 aa16.6■□□□□ 0.25
HDAC8-217ENST00000478743 DPF2Q92785 391 aa16.6■□□□□ 0.25
HDAC8-217ENST00000478743 TRIM17Q9Y577 477 aa16.6■□□□□ 0.25
HDAC8-217ENST00000478743 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
HDAC8-217ENST00000478743 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
HDAC8-217ENST00000478743 SNRPA1P09661 255 aaKnown RBP16.58■□□□□ 0.24
HDAC8-217ENST00000478743 TM4SF4P48230 202 aa16.58■□□□□ 0.24
HDAC8-217ENST00000478743 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
HDAC8-217ENST00000478743 ZNF609O15014 1411 aa16.57■□□□□ 0.24
HDAC8-217ENST00000478743 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
HDAC8-217ENST00000478743 PRAMEF18Q5VWM3 479 aa16.57■□□□□ 0.24
HDAC8-217ENST00000478743 ZBTB3Q9H5J0 574 aa16.57■□□□□ 0.24
HDAC8-217ENST00000478743 ANGEL2Q5VTE6 544 aaKnown RBP16.56■□□□□ 0.24
HDAC8-217ENST00000478743 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
HDAC8-217ENST00000478743 SP8Q8IXZ3 490 aa16.56■□□□□ 0.24
HDAC8-217ENST00000478743 CFHR5Q9BXR6 569 aa16.55■□□□□ 0.24
HDAC8-217ENST00000478743 LAMB1P07942 1786 aa16.55■□□□□ 0.24
HDAC8-217ENST00000478743 PSME4Q14997 1843 aa16.54■□□□□ 0.24
HDAC8-217ENST00000478743 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
HDAC8-217ENST00000478743 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
HDAC8-217ENST00000478743 ARMC5Q96C12 935 aa16.54■□□□□ 0.24
HDAC8-217ENST00000478743 ERVV-1B6SEH8 477 aa16.53■□□□□ 0.24
HDAC8-217ENST00000478743 RIMBP2O15034 1052 aa16.53■□□□□ 0.24
HDAC8-217ENST00000478743 DIAPH1O60610 1272 aaKnown RBP16.53■□□□□ 0.24
HDAC8-217ENST00000478743 DOK7Q18PE1 504 aa16.53■□□□□ 0.24
HDAC8-217ENST00000478743 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
HDAC8-217ENST00000478743 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-217ENST00000478743 PTPN22Q9Y2R2 807 aa16.53■□□□□ 0.24
HDAC8-217ENST00000478743 LAMA3Q16787 3333 aa16.53■□□□□ 0.24
HDAC8-217ENST00000478743 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.24
HDAC8-217ENST00000478743 SOX1O00570 391 aaPredicted RBP16.52■□□□□ 0.24
HDAC8-217ENST00000478743 ECE2O60344 883 aa16.52■□□□□ 0.24
HDAC8-217ENST00000478743 FKBP1BP68106 108 aa16.52■□□□□ 0.24
HDAC8-217ENST00000478743 MCM10Q7L590 875 aa16.52■□□□□ 0.24
HDAC8-217ENST00000478743 CD99L2Q8TCZ2 262 aa16.52■□□□□ 0.24
HDAC8-217ENST00000478743 NLRP3Q96P20 1036 aa16.52■□□□□ 0.24
HDAC8-217ENST00000478743 UNC80Q8N2C7 3258 aa16.52■□□□□ 0.23
HDAC8-217ENST00000478743 RPS12P25398 132 aaKnown RBP16.51■□□□□ 0.23
HDAC8-217ENST00000478743 SCARF1Q14162 830 aa16.51■□□□□ 0.23
HDAC8-217ENST00000478743 ZNF646O15015 1829 aaPredicted RBP16.51■□□□□ 0.23
HDAC8-217ENST00000478743 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
HDAC8-217ENST00000478743 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
HDAC8-217ENST00000478743 BBOX1O75936 387 aa16.49■□□□□ 0.23
HDAC8-217ENST00000478743 HCLS1P14317 486 aaPredicted RBP16.49■□□□□ 0.23
HDAC8-217ENST00000478743 MYL6BP14649 208 aa16.49■□□□□ 0.23
HDAC8-217ENST00000478743 GRAPQ13588 217 aa16.49■□□□□ 0.23
HDAC8-217ENST00000478743 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms