RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 ERBB3P21860 1342 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 SASH1O94885 1247 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 TATP17735 454 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-207ENST00000478503 AK2P54819 239 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 FERMT3Q86UX7 667 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 ANKARQ7Z5J8 1434 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 CYP27B1O15528 508 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 SGSM2O43147 1006 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 LONRF3Q496Y0 759 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 FSD1Q9BTV5 496 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 C19orf44Q9H6X5 657 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 TMEM63CQ9P1W3 806 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 STAP2Q9UGK3 403 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 CTDP1Q9Y5B0 961 aaPredicted RBP7.23□□□□□ -1.25
SH3D19-207ENST00000478503 IVNS1ABPQ9Y6Y0 642 aa7.23□□□□□ -1.25
SH3D19-207ENST00000478503 TOPAZ1Q8N9V7 1692 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 SSR1P43307 286 aaKnown RBP7.22□□□□□ -1.25
SH3D19-207ENST00000478503 KCNA1Q09470 495 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 PDIA6Q15084 440 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 ZNF280DQ6N043 979 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 FAM173BQ6P4H8 233 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 FAM43AQ8N2R8 423 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 MRRFQ96E11 262 aaKnown RBP7.22□□□□□ -1.25
SH3D19-207ENST00000478503 RBSNQ9H1K0 784 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 ZBTB3Q9H5J0 574 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 ECHDC1Q9NTX5 307 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 FER1L4A9Z1Z3 1794 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 FIBPO43427 364 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 KLHL40Q2TBA0 621 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 SKOR2Q2VWA4 1001 aaPredicted RBP7.22□□□□□ -1.25
SH3D19-207ENST00000478503 CCDC129Q6ZRS4 1044 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 MTA3Q9BTC8 594 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 RGPD1P0DJD0 1748 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 VPS37CA5D8V6 355 aaPredicted RBP7.22□□□□□ -1.25
SH3D19-207ENST00000478503 SPDYE4A6NLX3 237 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 CABP4P57796 275 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 NEXNQ0ZGT2 675 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 NEUROD6Q96NK8 337 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 SEC62Q99442 399 aaKnown RBP7.22□□□□□ -1.25
SH3D19-207ENST00000478503 LRRC2Q9BYS8 371 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 FRMD4BQ9Y2L6 1034 aa7.22□□□□□ -1.25
SH3D19-207ENST00000478503 GOLGB1Q14789 3259 aaKnown RBP7.21□□□□□ -1.25
SH3D19-207ENST00000478503 A1BGP04217 495 aa7.21□□□□□ -1.25
SH3D19-207ENST00000478503 NMIQ13287 307 aaPredicted RBP7.21□□□□□ -1.25
SH3D19-207ENST00000478503 ANKRD13DQ6ZTN6 518 aa7.21□□□□□ -1.25
SH3D19-207ENST00000478503 TOM1L2Q6ZVM7 507 aa7.21□□□□□ -1.25
SH3D19-207ENST00000478503 LSG1Q9H089 658 aaKnown RBP7.21□□□□□ -1.25
SH3D19-207ENST00000478503 SLC52A2Q9HAB3 445 aa7.21□□□□□ -1.25
SH3D19-207ENST00000478503 DDX21Q9NR30 783 aaKnown RBP eCLIP7.21□□□□□ -1.25
SH3D19-207ENST00000478503 TMEM94Q12767 1356 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 NPHP4O75161 1426 aaPredicted RBP7.21□□□□□ -1.26
SH3D19-207ENST00000478503 ADGRL3Q9HAR2 1447 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 A0A087WZG4 1122 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 A0A0D9SFI3 127 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 GOLIM4O00461 696 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 GLRX3O76003 335 aaKnown RBP7.21□□□□□ -1.26
SH3D19-207ENST00000478503 DDX58O95786 925 aaKnown RBP7.21□□□□□ -1.26
SH3D19-207ENST00000478503 CYP2E1P05181 493 aaPredicted RBP7.21□□□□□ -1.26
SH3D19-207ENST00000478503 PHKG2P15735 406 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 HSPA4P34932 840 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 RUFY3Q7L099 469 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 LINS1Q8NG48 757 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 HYPKQ9NX55 129 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 CNPY2Q9Y2B0 182 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 NPHP3Q7Z494 1330 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 EPB41L2O43491 1005 aaKnown RBP7.21□□□□□ -1.26
SH3D19-207ENST00000478503 DDX46Q7L014 1031 aaKnown RBP7.21□□□□□ -1.26
SH3D19-207ENST00000478503 ZNF594Q96JF6 807 aaPredicted RBP7.21□□□□□ -1.26
SH3D19-207ENST00000478503 PRDM11Q9NQV5 511 aa7.21□□□□□ -1.26
SH3D19-207ENST00000478503 GOLGA6CA6NDK9 693 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 GOLGA6BA6NDN3 693 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 HMGB1P1B2RPK0 211 aaPredicted RBP7.2□□□□□ -1.26
SH3D19-207ENST00000478503 SEMA3EO15041 775 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 GOLGA6DP0CG33 693 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 TFCP2Q12800 502 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 TTLL7Q6ZT98 887 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 DRC1Q96MC2 740 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 GOLGA6AQ9NYA3 693 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 TESPA1A2RU30 521 aaPredicted RBP7.2□□□□□ -1.26
SH3D19-207ENST00000478503 ERICH4A6NGS2 130 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 NEURL1BA8MQ27 555 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 ZNF589Q86UQ0 364 aaPredicted RBP7.2□□□□□ -1.26
SH3D19-207ENST00000478503 CXorf38Q8TB03 319 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 NALCNQ8IZF0 1738 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 TERF1P54274 439 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 TIMM10P62072 90 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 GCKRQ14397 625 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 USP48Q86UV5 1035 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 IFNL2Q8IZJ0 200 aa7.2□□□□□ -1.26
SH3D19-207ENST00000478503 RBM8AQ9Y5S9 174 aaKnown RBP7.2□□□□□ -1.26
SH3D19-207ENST00000478503 ESPNB1AK53 854 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 LMBR1LQ6UX01 489 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 PDRG1Q9NUG6 133 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 BABAM1Q9NWV8 329 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 SMC3Q9UQE7 1217 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 RAD50Q92878 1312 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 RGPD2P0DJD1 1756 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 HSP90AB3PQ58FF7 597 aa7.19□□□□□ -1.26
SH3D19-207ENST00000478503 LARP1Q6PKG0 1096 aaKnown RBP7.19□□□□□ -1.26
SH3D19-207ENST00000478503 TSHZ1Q6ZSZ6 1077 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms