RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 ELOA3BQ3SY89 546 aa6.99□□□□□ -1.29
GPNMB-210ENST00000478451 COX20Q5RI15 118 aa6.99□□□□□ -1.29
GPNMB-210ENST00000478451 ELOA3Q8NG57 546 aa6.99□□□□□ -1.29
GPNMB-210ENST00000478451 PTCD1O75127 700 aaKnown RBP6.98□□□□□ -1.29
GPNMB-210ENST00000478451 MICAL2O94851 1124 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 GRNP28799 593 aaKnown RBP6.98□□□□□ -1.29
GPNMB-210ENST00000478451 INPP5BP32019 993 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 TXKP42681 527 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 DGKGP49619 791 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 ARSDP51689 593 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 C16orf46Q6P387 395 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 CAPN12Q6ZSI9 719 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 TNFRSF25Q93038 417 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 BHMTQ93088 406 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 IFT43Q96FT9 208 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 MDFIQ99750 246 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 SAP130Q9H0E3 1048 aa6.98□□□□□ -1.29
GPNMB-210ENST00000478451 ADARB2-AS1A8MUL3 147 aa6.97□□□□□ -1.29
GPNMB-210ENST00000478451 DYRK3O43781 588 aa6.97□□□□□ -1.29
GPNMB-210ENST00000478451 KRTAP4-2Q9BYR5 136 aa6.97□□□□□ -1.29
GPNMB-210ENST00000478451 TMEM88BA6NKF7 163 aa6.96□□□□□ -1.3
GPNMB-210ENST00000478451 ALAS2P22557 587 aa6.96□□□□□ -1.3
GPNMB-210ENST00000478451 TREML1Q86YW5 311 aa6.96□□□□□ -1.3
GPNMB-210ENST00000478451 PNMA5Q96PV4 448 aa6.96□□□□□ -1.3
GPNMB-210ENST00000478451 GSX2Q9BZM3 304 aa6.96□□□□□ -1.3
GPNMB-210ENST00000478451 EFCC1Q9HA90 598 aa6.96□□□□□ -1.3
GPNMB-210ENST00000478451 TNFRSF10BO14763 440 aa6.95□□□□□ -1.3
GPNMB-210ENST00000478451 NFKB1P19838 968 aa6.95□□□□□ -1.3
GPNMB-210ENST00000478451 ADH7P40394 386 aa6.95□□□□□ -1.3
GPNMB-210ENST00000478451 CCINQ13939 588 aa6.95□□□□□ -1.3
GPNMB-210ENST00000478451 NAA30Q147X3 362 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-210ENST00000478451 MCTP1Q6DN14 999 aa6.95□□□□□ -1.3
GPNMB-210ENST00000478451 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-210ENST00000478451 OPLAHO14841 1288 aa6.94□□□□□ -1.3
GPNMB-210ENST00000478451 BRD2P25440 801 aaKnown RBP6.94□□□□□ -1.3
GPNMB-210ENST00000478451 TBC1D8BQ0IIM8 1120 aa6.94□□□□□ -1.3
GPNMB-210ENST00000478451 ETFBKMTQ8IXQ9 262 aa6.94□□□□□ -1.3
GPNMB-210ENST00000478451 UBE2OQ9C0C9 1292 aaKnown RBP6.94□□□□□ -1.3
GPNMB-210ENST00000478451 PAX4O43316 350 aa6.93□□□□□ -1.3
GPNMB-210ENST00000478451 PRSS36Q5K4E3 855 aa6.93□□□□□ -1.3
GPNMB-210ENST00000478451 KRT25Q7Z3Z0 450 aa6.93□□□□□ -1.3
GPNMB-210ENST00000478451 RGL4Q8IZJ4 473 aa6.93□□□□□ -1.3
GPNMB-210ENST00000478451 USP20Q9Y2K6 914 aa6.93□□□□□ -1.3
GPNMB-210ENST00000478451 RTCBQ9Y3I0 505 aaKnown RBP6.93□□□□□ -1.3
GPNMB-210ENST00000478451 FAM26DQ5JW98 314 aa6.92□□□□□ -1.3
GPNMB-210ENST00000478451 IGFLR1Q9H665 355 aa6.92□□□□□ -1.3
GPNMB-210ENST00000478451 C11orf16Q9NQ32 467 aa6.92□□□□□ -1.3
GPNMB-210ENST00000478451 TPSG1Q9NRR2 321 aa6.92□□□□□ -1.3
GPNMB-210ENST00000478451 SEPT3Q9UH03 358 aa6.92□□□□□ -1.3
GPNMB-210ENST00000478451 M0R082 166 aa6.91□□□□□ -1.3
GPNMB-210ENST00000478451 HYAL3O43820 417 aaPredicted RBP6.91□□□□□ -1.3
GPNMB-210ENST00000478451 ALBP02768 609 aa6.91□□□□□ -1.3
GPNMB-210ENST00000478451 SPATA31C1P0DKV0 1188 aa6.91□□□□□ -1.3
GPNMB-210ENST00000478451 HOMEZQ8IX15 550 aa6.91□□□□□ -1.3
GPNMB-210ENST00000478451 CMTR1Q8N1G2 835 aaKnown RBP6.91□□□□□ -1.3
GPNMB-210ENST00000478451 ZNF417Q8TAU3 575 aa6.91□□□□□ -1.3
GPNMB-210ENST00000478451 FMNL2Q96PY5 1086 aa6.91□□□□□ -1.3
GPNMB-210ENST00000478451 ZNF587Q96SQ5 575 aaPredicted RBP6.91□□□□□ -1.3
GPNMB-210ENST00000478451 DNAJB12Q9NXW2 375 aaKnown RBP6.91□□□□□ -1.3
GPNMB-210ENST00000478451 STIM2Q9P246 746 aa6.91□□□□□ -1.3
GPNMB-210ENST00000478451 SLC6A14Q9UN76 642 aa6.91□□□□□ -1.3
GPNMB-210ENST00000478451 STARD13Q9Y3M8 1113 aa6.91□□□□□ -1.3
GPNMB-210ENST00000478451 CARNS1A5YM72 827 aa6.9□□□□□ -1.3
GPNMB-210ENST00000478451 MAP3K6O95382 1288 aa6.9□□□□□ -1.3
GPNMB-210ENST00000478451 EGFRP00533 1210 aa6.9□□□□□ -1.3
GPNMB-210ENST00000478451 RARAP10276 462 aa6.9□□□□□ -1.3
GPNMB-210ENST00000478451 SSFA2P28290 1259 aa6.9□□□□□ -1.3
GPNMB-210ENST00000478451 ABTB2Q8N961 1025 aa6.9□□□□□ -1.3
GPNMB-210ENST00000478451 ZFATQ9P243 1243 aa6.9□□□□□ -1.3
GPNMB-210ENST00000478451 KCNMB2Q9Y691 235 aa6.9□□□□□ -1.3
GPNMB-210ENST00000478451 ABCC9O60706 1549 aa6.9□□□□□ -1.31
GPNMB-210ENST00000478451 XYLBO75191 536 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 SASH3O75995 380 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 TARSP26639 723 aaKnown RBP6.89□□□□□ -1.31
GPNMB-210ENST00000478451 SCNN1AP37088 669 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 ZAP70P43403 619 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 DHX32Q7L7V1 743 aaKnown RBP6.89□□□□□ -1.31
GPNMB-210ENST00000478451 MICALL1Q8N3F8 863 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 HELQQ8TDG4 1101 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 TRIM11Q96F44 468 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 PRDM6Q9NQX0 595 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 FAM13BQ9NYF5 915 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 USTQ9Y2C2 406 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 MYO15BQ96JP2 1530 aa6.89□□□□□ -1.31
GPNMB-210ENST00000478451 COL17A1Q9UMD9 1497 aaPredicted RBP6.88□□□□□ -1.31
GPNMB-210ENST00000478451 TRIP4Q15650 581 aaPredicted RBP6.88□□□□□ -1.31
GPNMB-210ENST00000478451 C20orf204Q6ZNR8 217 aa6.88□□□□□ -1.31
GPNMB-210ENST00000478451 C8orf86Q6ZUL3 223 aa6.88□□□□□ -1.31
GPNMB-210ENST00000478451 NAGPAQ9UK23 515 aa6.88□□□□□ -1.31
GPNMB-210ENST00000478451 ZBTB39O15060 712 aa6.87□□□□□ -1.31
GPNMB-210ENST00000478451 GPLD1P80108 840 aa6.87□□□□□ -1.31
GPNMB-210ENST00000478451 FZD5Q13467 585 aa6.87□□□□□ -1.31
GPNMB-210ENST00000478451 PCSK7Q16549 785 aa6.87□□□□□ -1.31
GPNMB-210ENST00000478451 PIK3R5Q8WYR1 880 aa6.87□□□□□ -1.31
GPNMB-210ENST00000478451 PLVAPQ9BX97 442 aa6.87□□□□□ -1.31
GPNMB-210ENST00000478451 LILRB5O75023 590 aa6.86□□□□□ -1.31
GPNMB-210ENST00000478451 ARID4AP29374 1257 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-210ENST00000478451 MLLT1Q03111 559 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-210ENST00000478451 COL9A3Q14050 684 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-210ENST00000478451 PHLDB3Q6NSJ2 640 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms