RNA–Protein interactions for RNA: ENST00000478271.1

EXOSC10-208, Transcript of exosome component 10, humanhuman

TSL 2

Gene EXOSC10, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-208ENST00000478271 NLRP3Q96P20 1036 aa8.48□□□□□ -1.05
EXOSC10-208ENST00000478271 CDHR2Q9BYE9 1310 aa8.48□□□□□ -1.05
EXOSC10-208ENST00000478271 BRCA1P38398 1863 aaKnown RBP8.47□□□□□ -1.05
EXOSC10-208ENST00000478271 ALDH1L1O75891 902 aa8.47□□□□□ -1.05
EXOSC10-208ENST00000478271 TRIM27P14373 513 aa8.47□□□□□ -1.05
EXOSC10-208ENST00000478271 OLFM4Q6UX06 510 aa8.47□□□□□ -1.05
EXOSC10-208ENST00000478271 TTLL6Q8N841 843 aa8.47□□□□□ -1.05
EXOSC10-208ENST00000478271 C7orf43Q8WVR3 580 aa8.47□□□□□ -1.05
EXOSC10-208ENST00000478271 ARHGAP45Q92619 1136 aa8.47□□□□□ -1.05
EXOSC10-208ENST00000478271 KAZALD1Q96I82 304 aa8.47□□□□□ -1.05
EXOSC10-208ENST00000478271 SRCIN1Q9C0H9 1055 aa8.47□□□□□ -1.05
EXOSC10-208ENST00000478271 COL4A1P02462 1669 aa8.46□□□□□ -1.05
EXOSC10-208ENST00000478271 DDX60Q8IY21 1712 aaKnown RBP8.46□□□□□ -1.05
EXOSC10-208ENST00000478271 PDE8AO60658 829 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 NBPF7P0C2Y1 421 aaPredicted RBP8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 EPHA10Q5JZY3 1008 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 PRPF40BQ6NWY9 871 aaKnown RBP8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 UBE3BQ7Z3V4 1068 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 TTLL11Q8NHH1 800 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 FRAT1Q92837 279 aaPredicted RBP8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 CNKSR1Q969H4 720 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 CRAMP1Q96RY5 1269 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 PLA2G12BQ9BX93 195 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 API5Q9BZZ5 524 aaKnown RBP8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 USP44Q9H0E7 712 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 SEC31BQ9NQW1 1179 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 UTYO14607 1347 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 ABCC4O15439 1325 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 KIF16BQ96L93 1317 aa8.46□□□□□ -1.06
EXOSC10-208ENST00000478271 DLEC1Q9Y238 1755 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 SLX4Q8IY92 1834 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 GRM8O00222 908 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 C21orf2O43822 256 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 CSF1RP07333 972 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 RLBP1P12271 317 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 PRELPP51888 382 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 FOXO4P98177 505 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 ZKSCAN2Q63HK3 967 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 INTS3Q68E01 1043 aaKnown RBP8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 ATF7IPQ6VMQ6 1270 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 RPGRQ92834 1020 aaKnown RBP8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 CELF1Q92879 486 aaKnown RBP8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 CLUAP1Q96AJ1 413 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 RBM17Q96I25 401 aaKnown RBP8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 SUCLG2Q96I99 432 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 CCDC85AQ96PX6 553 aaPredicted RBP8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 RCAN3Q9UKA8 241 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 SNED1Q8TER0 1413 aa8.45□□□□□ -1.06
EXOSC10-208ENST00000478271 LAMB2P55268 1798 aa8.44□□□□□ -1.06
EXOSC10-208ENST00000478271 NFKBIEO00221 500 aa8.44□□□□□ -1.06
EXOSC10-208ENST00000478271 PLIN1O60240 522 aa8.44□□□□□ -1.06
EXOSC10-208ENST00000478271 GRIN3BO60391 1043 aa8.44□□□□□ -1.06
EXOSC10-208ENST00000478271 MS4A1P11836 297 aa8.44□□□□□ -1.06
EXOSC10-208ENST00000478271 ALDH1B1P30837 517 aa8.44□□□□□ -1.06
EXOSC10-208ENST00000478271 CTSWP56202 376 aa8.44□□□□□ -1.06
EXOSC10-208ENST00000478271 GREM2Q9H772 168 aa8.44□□□□□ -1.06
EXOSC10-208ENST00000478271 IPO8O15397 1037 aaKnown RBP8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 CCT4P50991 539 aaKnown RBP8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 RASSF7Q02833 373 aa8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 GRAPQ13588 217 aa8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 ARHGAP27Q6ZUM4 889 aa8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 DDX46Q7L014 1031 aaKnown RBP8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 TMEM57Q8N5G2 664 aa8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 ANKRD44Q8N8A2 993 aa8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 GRAPLQ8TC17 118 aaPredicted RBP8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 MEIS3Q99687 375 aa8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 C9orf78Q9NZ63 289 aaPredicted RBP8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 TAF1P21675 1872 aa8.43□□□□□ -1.06
EXOSC10-208ENST00000478271 PPEF1O14829 653 aaPredicted RBP8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 BBOX1O75936 387 aa8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 RPS8P62241 208 aaKnown RBP8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 FAM161AQ3B820 660 aa8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 RABL6Q3YEC7 729 aaPredicted RBP8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 CCDC152Q4G0S7 254 aa8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 LMBR1LQ6UX01 489 aa8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 PIP4P2Q8N4L2 257 aa8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 PANK1Q8TE04 598 aa8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 BICC1Q9H694 974 aaKnown RBP8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 ATP6V0A2Q9Y487 856 aa8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 ARFGEF1Q9Y6D6 1849 aa8.42□□□□□ -1.06
EXOSC10-208ENST00000478271 RTL9Q8NET4 1388 aa8.41□□□□□ -1.06
EXOSC10-208ENST00000478271 HSP90B1P14625 803 aaKnown RBP8.41□□□□□ -1.06
EXOSC10-208ENST00000478271 ITGA6P23229 1130 aa8.41□□□□□ -1.06
EXOSC10-208ENST00000478271 CCDC93Q567U6 631 aa8.41□□□□□ -1.06
EXOSC10-208ENST00000478271 C20orf194Q5TEA3 1177 aa8.41□□□□□ -1.06
EXOSC10-208ENST00000478271 SP8Q8IXZ3 490 aa8.41□□□□□ -1.06
EXOSC10-208ENST00000478271 DZIP1LQ8IYY4 767 aaKnown RBP8.41□□□□□ -1.06
EXOSC10-208ENST00000478271 WTIPA6NIX2 430 aaPredicted RBP8.4□□□□□ -1.06
EXOSC10-208ENST00000478271 ZBTB7BO15156 539 aaPredicted RBP8.4□□□□□ -1.06
EXOSC10-208ENST00000478271 ZNF594Q96JF6 807 aaPredicted RBP8.4□□□□□ -1.06
EXOSC10-208ENST00000478271 LRRFIP2Q9Y608 721 aaKnown RBP8.4□□□□□ -1.06
EXOSC10-208ENST00000478271 CACNA1SQ13698 1873 aa8.39□□□□□ -1.07
EXOSC10-208ENST00000478271 LTBP3Q9NS15 1303 aa8.39□□□□□ -1.07
EXOSC10-208ENST00000478271 RFX5P48382 616 aaPredicted RBP8.39□□□□□ -1.07
EXOSC10-208ENST00000478271 GPSM2P81274 684 aa8.39□□□□□ -1.07
EXOSC10-208ENST00000478271 FKBP4Q02790 459 aaKnown RBP eCLIP8.39□□□□□ -1.07
EXOSC10-208ENST00000478271 SOGA3Q5TF21 947 aa8.39□□□□□ -1.07
EXOSC10-208ENST00000478271 C9orf131Q5VYM1 1079 aa8.39□□□□□ -1.07
EXOSC10-208ENST00000478271 CC2D2BQ6DHV5 1058 aa8.39□□□□□ -1.07
EXOSC10-208ENST00000478271 ANKRD18AQ8IVF6 992 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms